RNA–Protein interactions for RNA: ENST00000285199.11

USP43-201, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP43, Length 4,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-201ENST00000285199 NFATC3Q12968 1075 aa15.54■□□□□ 0.08
USP43-201ENST00000285199 MAD2L1Q13257 205 aaPredicted RBP15.54■□□□□ 0.08
USP43-201ENST00000285199 VEPH1Q14D04 833 aa15.54■□□□□ 0.08
USP43-201ENST00000285199 FAM219BQ5XKK7 198 aa15.54■□□□□ 0.08
USP43-201ENST00000285199 PGM2L1Q6PCE3 622 aa15.54■□□□□ 0.08
USP43-201ENST00000285199 CACUL1Q86Y37 369 aa15.54■□□□□ 0.08
USP43-201ENST00000285199 NPWQ8N729 165 aa15.54■□□□□ 0.08
USP43-201ENST00000285199 NSMCE3Q96MG7 304 aa15.54■□□□□ 0.08
USP43-201ENST00000285199 RNF38Q9H0F5 515 aa15.54■□□□□ 0.08
USP43-201ENST00000285199 FAIMQ9NVQ4 179 aa15.54■□□□□ 0.08
USP43-201ENST00000285199 RIMS3Q9UJD0 308 aa15.54■□□□□ 0.08
USP43-201ENST00000285199 ST3GAL5Q9UNP4 418 aa15.54■□□□□ 0.08
USP43-201ENST00000285199 PCDHGA7Q9Y5G6 932 aa15.54■□□□□ 0.08
USP43-201ENST00000285199 HMX2A2RU54 273 aa15.53■□□□□ 0.08
USP43-201ENST00000285199 CCDC182A6NF36 153 aa15.53■□□□□ 0.08
USP43-201ENST00000285199 PCP4L1A6NKN8 68 aa15.53■□□□□ 0.08
USP43-201ENST00000285199 H3BMQ9 156 aa15.53■□□□□ 0.08
USP43-201ENST00000285199 GNPDA1P46926 289 aa15.53■□□□□ 0.08
USP43-201ENST00000285199 ATN1P54259 1190 aaPredicted RBP15.53■□□□□ 0.08
USP43-201ENST00000285199 OR4D2P58180 307 aa15.53■□□□□ 0.08
USP43-201ENST00000285199 ARMC12Q5T9G4 340 aa15.53■□□□□ 0.08
USP43-201ENST00000285199 INTS11Q5TA45 600 aaKnown RBP15.53■□□□□ 0.08
USP43-201ENST00000285199 COG8Q96MW5 612 aa15.53■□□□□ 0.08
USP43-201ENST00000285199 HNRNPABQ99729 332 aaKnown RBP15.53■□□□□ 0.08
USP43-201ENST00000285199 DCSTAMPQ9H295 470 aa15.53■□□□□ 0.08
USP43-201ENST00000285199 EHD1Q9H4M9 534 aa15.53■□□□□ 0.08
USP43-201ENST00000285199 RPF2Q9H7B2 306 aaKnown RBP15.53■□□□□ 0.08
USP43-201ENST00000285199 RAPGEFL1Q9UHV5 662 aa15.53■□□□□ 0.08
USP43-201ENST00000285199 ARIH1Q9Y4X5 557 aaPredicted RBP15.53■□□□□ 0.08
USP43-201ENST00000285199 LPOP22079 712 aaPredicted RBP15.53■□□□□ 0.08
USP43-201ENST00000285199 NANOGP8Q6NSW7 305 aa15.53■□□□□ 0.08
USP43-201ENST00000285199 TPGS1Q6ZTW0 290 aa15.53■□□□□ 0.08
USP43-201ENST00000285199 PLEKHM3Q6ZWE6 761 aa15.53■□□□□ 0.08
USP43-201ENST00000285199 OSTM1Q86WC4 334 aa15.53■□□□□ 0.08
USP43-201ENST00000285199 LEMD2Q8NC56 503 aa15.53■□□□□ 0.08
USP43-201ENST00000285199 NANOGQ9H9S0 305 aa15.53■□□□□ 0.08
USP43-201ENST00000285199 NUP188Q5SRE5 1749 aa15.53■□□□□ 0.08
USP43-201ENST00000285199 PDHXO00330 501 aa15.53■□□□□ 0.08
USP43-201ENST00000285199 DPYSL4O14531 572 aa15.53■□□□□ 0.08
USP43-201ENST00000285199 OPN1SWP03999 348 aa15.53■□□□□ 0.08
USP43-201ENST00000285199 IQCF3P0C7M6 154 aa15.53■□□□□ 0.08
USP43-201ENST00000285199 CD1EP15812 388 aa15.53■□□□□ 0.08
USP43-201ENST00000285199 PORP16435 677 aaPredicted RBP15.53■□□□□ 0.08
USP43-201ENST00000285199 CCNCP24863 283 aa15.53■□□□□ 0.08
USP43-201ENST00000285199 TCEA2Q15560 299 aa15.53■□□□□ 0.08
USP43-201ENST00000285199 SMYD5Q6GMV2 418 aa15.53■□□□□ 0.08
USP43-201ENST00000285199 DOK6Q6PKX4 331 aa15.53■□□□□ 0.08
USP43-201ENST00000285199 FAM131AQ6UXB0 335 aa15.53■□□□□ 0.08
USP43-201ENST00000285199 SCAIQ8N9R8 606 aa15.53■□□□□ 0.08
USP43-201ENST00000285199 WDR36Q8NI36 951 aaKnown RBP15.53■□□□□ 0.08
USP43-201ENST00000285199 CGREF1Q99674 301 aa15.53■□□□□ 0.08
USP43-201ENST00000285199 OLFM1Q99784 485 aa15.53■□□□□ 0.08
USP43-201ENST00000285199 KAT8Q9H7Z6 458 aaKnown RBP15.53■□□□□ 0.08
USP43-201ENST00000285199 LRTM1Q9HBL6 345 aa15.53■□□□□ 0.08
USP43-201ENST00000285199 DYRK4Q9NR20 520 aa15.53■□□□□ 0.08
USP43-201ENST00000285199 ZNF624Q9P2J8 865 aaPredicted RBP15.53■□□□□ 0.08
USP43-201ENST00000285199 PCDHB3Q9Y5E6 796 aa15.53■□□□□ 0.08
USP43-201ENST00000285199 TNPO3Q9Y5L0 923 aaKnown RBP15.53■□□□□ 0.08
USP43-201ENST00000285199 PRR23AA6NEV1 266 aa15.52■□□□□ 0.08
USP43-201ENST00000285199 DARSP14868 501 aaKnown RBP15.52■□□□□ 0.08
USP43-201ENST00000285199 TUFMP49411 452 aaKnown RBP15.52■□□□□ 0.08
USP43-201ENST00000285199 PTGR1Q14914 329 aa15.52■□□□□ 0.08
USP43-201ENST00000285199 ZNF284Q2VY69 593 aa15.52■□□□□ 0.08
USP43-201ENST00000285199 PDE12Q6L8Q7 609 aaKnown RBP15.52■□□□□ 0.08
USP43-201ENST00000285199 TRIM48Q8IWZ4 208 aa15.52■□□□□ 0.08
USP43-201ENST00000285199 CLDN19Q8N6F1 224 aa15.52■□□□□ 0.08
USP43-201ENST00000285199 KBTBD8Q8NFY9 601 aa15.52■□□□□ 0.08
USP43-201ENST00000285199 PHF10Q8WUB8 498 aaKnown RBP15.52■□□□□ 0.08
USP43-201ENST00000285199 YME1L1Q96TA2 773 aa15.52■□□□□ 0.08
USP43-201ENST00000285199 ACAT2Q9BWD1 397 aa15.52■□□□□ 0.08
USP43-201ENST00000285199 TEX12Q9BXU0 123 aa15.52■□□□□ 0.08
USP43-201ENST00000285199 ZDHHC7Q9NXF8 308 aa15.52■□□□□ 0.08
USP43-201ENST00000285199 ECI2O75521 394 aa15.52■□□□□ 0.08
USP43-201ENST00000285199 PRSS56P0CW18 603 aa15.52■□□□□ 0.08
USP43-201ENST00000285199 GLDCP23378 1020 aa15.52■□□□□ 0.08
USP43-201ENST00000285199 MAPK1P28482 360 aa15.52■□□□□ 0.08
USP43-201ENST00000285199 RAB14P61106 215 aa15.52■□□□□ 0.08
USP43-201ENST00000285199 ATP6V0D1P61421 351 aa15.52■□□□□ 0.08
USP43-201ENST00000285199 NFE2Q16621 373 aaPredicted RBP15.52■□□□□ 0.08
USP43-201ENST00000285199 KIAA0930Q6ICG6 404 aaPredicted RBP15.52■□□□□ 0.08
USP43-201ENST00000285199 PPP4R4Q6NUP7 873 aa15.52■□□□□ 0.08
USP43-201ENST00000285199 DDX53Q86TM3 631 aaKnown RBP15.52■□□□□ 0.08
USP43-201ENST00000285199 ZNF614Q8N883 585 aa15.52■□□□□ 0.08
USP43-201ENST00000285199 SLC13A3Q8WWT9 602 aa15.52■□□□□ 0.08
USP43-201ENST00000285199 C1GALT1C1Q96EU7 318 aa15.52■□□□□ 0.08
USP43-201ENST00000285199 TDRD1Q9BXT4 1180 aaKnown RBP15.52■□□□□ 0.08
USP43-201ENST00000285199 SLC25A51Q9H1U9 297 aa15.52■□□□□ 0.08
USP43-201ENST00000285199 WDR37Q9Y2I8 494 aa15.52■□□□□ 0.08
USP43-201ENST00000285199 ZNF451Q9Y4E5 1061 aa15.52■□□□□ 0.08
USP43-201ENST00000285199 NUP214P35658 2090 aaPredicted RBP15.52■□□□□ 0.07
USP43-201ENST00000285199 ZCWPW2A0A1B0GU75 182 aa15.52■□□□□ 0.07
USP43-201ENST00000285199 TMX2-CTNND1H3BSU7 103 aa15.52■□□□□ 0.07
USP43-201ENST00000285199 INMTO95050 263 aa15.52■□□□□ 0.07
USP43-201ENST00000285199 SLC25A14O95258 325 aaPredicted RBP15.52■□□□□ 0.07
USP43-201ENST00000285199 OPRL1P41146 370 aa15.52■□□□□ 0.07
USP43-201ENST00000285199 PTPN5P54829 565 aa15.52■□□□□ 0.07
USP43-201ENST00000285199 PHC1P78364 1004 aa15.52■□□□□ 0.07
USP43-201ENST00000285199 HNRNPDQ14103 355 aaKnown RBP15.52■□□□□ 0.07
USP43-201ENST00000285199 EIF3MQ7L2H7 374 aaKnown RBP15.52■□□□□ 0.07
USP43-201ENST00000285199 SPATA19Q7Z5L4 167 aa15.52■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms