RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 C1QTNF1Q9BXJ1 281 aa18.63■□□□□ 0.57
PDLIM3-202ENST00000284770 IQCGQ9H095 443 aaKnown RBP18.63■□□□□ 0.57
PDLIM3-202ENST00000284770 SARS2Q9NP81 518 aaKnown RBP18.63■□□□□ 0.57
PDLIM3-202ENST00000284770 GPR34Q9UPC5 381 aa18.63■□□□□ 0.57
PDLIM3-202ENST00000284770 PIKFYVEQ9Y2I7 2098 aa18.63■□□□□ 0.57
PDLIM3-202ENST00000284770 GPR89AB7ZAQ6 455 aa18.63■□□□□ 0.57
PDLIM3-202ENST00000284770 CACNB4O00305 520 aaPredicted RBP18.63■□□□□ 0.57
PDLIM3-202ENST00000284770 MAGEC1O60732 1142 aa18.63■□□□□ 0.57
PDLIM3-202ENST00000284770 KLHL2O95198 593 aa18.63■□□□□ 0.57
PDLIM3-202ENST00000284770 FTH1P02794 183 aa18.63■□□□□ 0.57
PDLIM3-202ENST00000284770 GPR89BP0CG08 455 aa18.63■□□□□ 0.57
PDLIM3-202ENST00000284770 CCDC166P0CW27 439 aa18.63■□□□□ 0.57
PDLIM3-202ENST00000284770 ZNF8P17098 575 aaPredicted RBP18.63■□□□□ 0.57
PDLIM3-202ENST00000284770 ITGB6P18564 788 aa18.63■□□□□ 0.57
PDLIM3-202ENST00000284770 BCL7AQ4VC05 210 aa18.63■□□□□ 0.57
PDLIM3-202ENST00000284770 GCNT7Q6ZNI0 430 aa18.63■□□□□ 0.57
PDLIM3-202ENST00000284770 SPNS2Q8IVW8 549 aa18.63■□□□□ 0.57
PDLIM3-202ENST00000284770 MAML2Q8IZL2 1156 aaPredicted RBP18.63■□□□□ 0.57
PDLIM3-202ENST00000284770 BEND7Q8N7W2 519 aaPredicted RBP18.63■□□□□ 0.57
PDLIM3-202ENST00000284770 ANKRD49Q8WVL7 239 aa18.63■□□□□ 0.57
PDLIM3-202ENST00000284770 DYDC1Q8WWB3 177 aa18.63■□□□□ 0.57
PDLIM3-202ENST00000284770 INPP5DQ92835 1189 aa18.63■□□□□ 0.57
PDLIM3-202ENST00000284770 KLHL42Q9P2K6 505 aa18.63■□□□□ 0.57
PDLIM3-202ENST00000284770 EMCNQ9ULC0 261 aa18.63■□□□□ 0.57
PDLIM3-202ENST00000284770 CA5BQ9Y2D0 317 aa18.63■□□□□ 0.57
PDLIM3-202ENST00000284770 H0Y8X5 98 aa18.62■□□□□ 0.57
PDLIM3-202ENST00000284770 CHUKO15111 745 aa18.62■□□□□ 0.57
PDLIM3-202ENST00000284770 MAP3K13O43283 966 aa18.62■□□□□ 0.57
PDLIM3-202ENST00000284770 NUAK1O60285 661 aa18.62■□□□□ 0.57
PDLIM3-202ENST00000284770 FNTBP49356 437 aa18.62■□□□□ 0.57
PDLIM3-202ENST00000284770 PFN3P60673 137 aa18.62■□□□□ 0.57
PDLIM3-202ENST00000284770 IL9RQ01113 521 aa18.62■□□□□ 0.57
PDLIM3-202ENST00000284770 HHATQ5VTY9 493 aa18.62■□□□□ 0.57
PDLIM3-202ENST00000284770 DOK6Q6PKX4 331 aa18.62■□□□□ 0.57
PDLIM3-202ENST00000284770 OTOAQ7RTW8 1153 aa18.62■□□□□ 0.57
PDLIM3-202ENST00000284770 WDR5BQ86VZ2 330 aa18.62■□□□□ 0.57
PDLIM3-202ENST00000284770 FBXL6Q8N531 539 aa18.62■□□□□ 0.57
PDLIM3-202ENST00000284770 DTWD2Q8NBA8 298 aa18.62■□□□□ 0.57
PDLIM3-202ENST00000284770 KCTD4Q8WVF5 259 aa18.62■□□□□ 0.57
PDLIM3-202ENST00000284770 ORAI3Q9BRQ5 295 aa18.62■□□□□ 0.57
PDLIM3-202ENST00000284770 TOR1BO14657 336 aa18.61■□□□□ 0.57
PDLIM3-202ENST00000284770 LILRB5O75023 590 aa18.61■□□□□ 0.57
PDLIM3-202ENST00000284770 AOAHP28039 575 aa18.61■□□□□ 0.57
PDLIM3-202ENST00000284770 CCR7P32248 378 aa18.61■□□□□ 0.57
PDLIM3-202ENST00000284770 KIAA1024LP59773 190 aa18.61■□□□□ 0.57
PDLIM3-202ENST00000284770 YPEL5P62699 121 aa18.61■□□□□ 0.57
PDLIM3-202ENST00000284770 CSTF1Q05048 431 aaKnown RBP18.61■□□□□ 0.57
PDLIM3-202ENST00000284770 DLG1Q12959 904 aa18.61■□□□□ 0.57
PDLIM3-202ENST00000284770 CSHL1Q14406 222 aa18.61■□□□□ 0.57
PDLIM3-202ENST00000284770 SEPT7Q16181 437 aaKnown RBP18.61■□□□□ 0.57
PDLIM3-202ENST00000284770 FAM83EQ2M2I3 478 aa18.61■□□□□ 0.57
PDLIM3-202ENST00000284770 KYAT3Q6YP21 454 aaKnown RBP18.61■□□□□ 0.57
PDLIM3-202ENST00000284770 ABI3BPQ7Z7G0 1075 aa18.61■□□□□ 0.57
PDLIM3-202ENST00000284770 TAX1BP1Q86VP1 789 aa18.61■□□□□ 0.57
PDLIM3-202ENST00000284770 LONP2Q86WA8 852 aa18.61■□□□□ 0.57
PDLIM3-202ENST00000284770 TRAPPC5Q8IUR0 188 aa18.61■□□□□ 0.57
PDLIM3-202ENST00000284770 SPATA6LQ8N4H0 392 aa18.61■□□□□ 0.57
PDLIM3-202ENST00000284770 NKAPQ8N5F7 415 aaKnown RBP18.61■□□□□ 0.57
PDLIM3-202ENST00000284770 ZBTB2Q8N680 514 aa18.61■□□□□ 0.57
PDLIM3-202ENST00000284770 DEFB119Q8N690 84 aa18.61■□□□□ 0.57
PDLIM3-202ENST00000284770 SNX19Q92543 992 aa18.61■□□□□ 0.57
PDLIM3-202ENST00000284770 NXNL1Q96CM4 212 aa18.61■□□□□ 0.57
PDLIM3-202ENST00000284770 MAGEB18Q96M61 343 aa18.61■□□□□ 0.57
PDLIM3-202ENST00000284770 TSNARE1Q96NA8 513 aa18.61■□□□□ 0.57
PDLIM3-202ENST00000284770 ZNF317Q96PQ6 595 aaPredicted RBP18.61■□□□□ 0.57
PDLIM3-202ENST00000284770 PAIP2Q9BPZ3 127 aaKnown RBP18.61■□□□□ 0.57
PDLIM3-202ENST00000284770 CCM2Q9BSQ5 444 aa18.61■□□□□ 0.57
PDLIM3-202ENST00000284770 IGSF5Q9NSI5 407 aa18.61■□□□□ 0.57
PDLIM3-202ENST00000284770 ZNF358Q9NW07 568 aa18.61■□□□□ 0.57
PDLIM3-202ENST00000284770 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.61■□□□□ 0.57
PDLIM3-202ENST00000284770 RUVBL2Q9Y230 463 aaKnown RBP18.61■□□□□ 0.57
PDLIM3-202ENST00000284770 SLC17A4Q9Y2C5 497 aa18.61■□□□□ 0.57
PDLIM3-202ENST00000284770 CACNA1IQ9P0X4 2223 aa18.61■□□□□ 0.57
PDLIM3-202ENST00000284770 KPNA5O15131 536 aa18.6■□□□□ 0.57
PDLIM3-202ENST00000284770 LTA4HP09960 611 aaKnown RBP18.6■□□□□ 0.57
PDLIM3-202ENST00000284770 BCKDHBP21953 392 aa18.6■□□□□ 0.57
PDLIM3-202ENST00000284770 CD27P26842 260 aa18.6■□□□□ 0.57
PDLIM3-202ENST00000284770 SEC24CP53992 1094 aa18.6■□□□□ 0.57
PDLIM3-202ENST00000284770 IL2P60568 153 aa18.6■□□□□ 0.57
PDLIM3-202ENST00000284770 TSNAXIP1Q2TAA8 658 aa18.6■□□□□ 0.57
PDLIM3-202ENST00000284770 N4BP2L1Q5TBK1 243 aaPredicted RBP18.6■□□□□ 0.57
PDLIM3-202ENST00000284770 AGAP9Q5VTM2 703 aa18.6■□□□□ 0.57
PDLIM3-202ENST00000284770 ZNF547Q8IVP9 402 aa18.6■□□□□ 0.57
PDLIM3-202ENST00000284770 LINC00615Q96LM1 132 aaPredicted RBP18.6■□□□□ 0.57
PDLIM3-202ENST00000284770 GPR78Q96P69 363 aa18.6■□□□□ 0.57
PDLIM3-202ENST00000284770 EPN3Q9H201 632 aa18.6■□□□□ 0.57
PDLIM3-202ENST00000284770 TMEM216Q9P0N5 145 aa18.6■□□□□ 0.57
PDLIM3-202ENST00000284770 PLXND1Q9Y4D7 1925 aa18.6■□□□□ 0.57
PDLIM3-202ENST00000284770 TMEM202A6NGA9 273 aa18.6■□□□□ 0.57
PDLIM3-202ENST00000284770 CEACAM5P06731 702 aa18.6■□□□□ 0.57
PDLIM3-202ENST00000284770 RABIFP47224 123 aa18.6■□□□□ 0.57
PDLIM3-202ENST00000284770 PDK4Q16654 411 aa18.6■□□□□ 0.57
PDLIM3-202ENST00000284770 TTLL9Q3SXZ7 439 aa18.6■□□□□ 0.57
PDLIM3-202ENST00000284770 C16orf46Q6P387 395 aa18.6■□□□□ 0.57
PDLIM3-202ENST00000284770 CPNE9Q8IYJ1 553 aa18.6■□□□□ 0.57
PDLIM3-202ENST00000284770 ARMC2Q8NEN0 867 aa18.6■□□□□ 0.57
PDLIM3-202ENST00000284770 EEF1AKMT1Q8WVE0 214 aa18.6■□□□□ 0.57
PDLIM3-202ENST00000284770 ELMO1Q92556 727 aa18.6■□□□□ 0.57
PDLIM3-202ENST00000284770 FBXO4Q9UKT5 387 aa18.6■□□□□ 0.57
PDLIM3-202ENST00000284770 GMNCA6NCL1 334 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms