RNA–Protein interactions for RNA: ENST00000279550.11

YBX3-202, Transcript of Y-box binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene YBX3, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-202ENST00000279550 HLA-EP13747 358 aa20.69■□□□□ 0.9
YBX3-202ENST00000279550 ZNF7P17097 686 aaPredicted RBP20.69■□□□□ 0.9
YBX3-202ENST00000279550 RAP1GDS1P52306 607 aa20.69■□□□□ 0.9
YBX3-202ENST00000279550 INHBCP55103 352 aa20.69■□□□□ 0.9
YBX3-202ENST00000279550 SATB1Q01826 763 aa20.69■□□□□ 0.9
YBX3-202ENST00000279550 KPNB1Q14974 876 aaKnown RBP20.69■□□□□ 0.9
YBX3-202ENST00000279550 UGT3A2Q3SY77 523 aa20.69■□□□□ 0.9
YBX3-202ENST00000279550 EGFLAMQ63HQ2 1017 aa20.69■□□□□ 0.9
YBX3-202ENST00000279550 NXPE1Q8N323 547 aa20.69■□□□□ 0.9
YBX3-202ENST00000279550 THTPAQ9BU02 230 aa20.69■□□□□ 0.9
YBX3-202ENST00000279550 C8orf33Q9H7E9 229 aaPredicted RBP20.69■□□□□ 0.9
YBX3-202ENST00000279550 IL36AQ9UHA7 158 aa20.69■□□□□ 0.9
YBX3-202ENST00000279550 COPG1Q9Y678 874 aaKnown RBP20.69■□□□□ 0.9
YBX3-202ENST00000279550 A0A1B0GTL3 188 aa20.68■□□□□ 0.9
YBX3-202ENST00000279550 NCF1BA6NI72 391 aaPredicted RBP20.68■□□□□ 0.9
YBX3-202ENST00000279550 NCF1CA8MVU1 366 aaPredicted RBP20.68■□□□□ 0.9
YBX3-202ENST00000279550 LEFTY1O75610 366 aa20.68■□□□□ 0.9
YBX3-202ENST00000279550 TM7SF2O76062 418 aa20.68■□□□□ 0.9
YBX3-202ENST00000279550 RPS17P08708 135 aaKnown RBP20.68■□□□□ 0.9
YBX3-202ENST00000279550 NCF1P14598 390 aaPredicted RBP20.68■□□□□ 0.9
YBX3-202ENST00000279550 ITGAXP20702 1163 aa20.68■□□□□ 0.9
YBX3-202ENST00000279550 CCND1P24385 295 aa20.68■□□□□ 0.9
YBX3-202ENST00000279550 PPARGP37231 505 aaPredicted RBP20.68■□□□□ 0.9
YBX3-202ENST00000279550 IL12RB1P42701 662 aa20.68■□□□□ 0.9
YBX3-202ENST00000279550 TNFRSF4P43489 277 aa20.68■□□□□ 0.9
YBX3-202ENST00000279550 CUL3Q13618 768 aa20.68■□□□□ 0.9
YBX3-202ENST00000279550 PPP1R3AQ16821 1122 aa20.68■□□□□ 0.9
YBX3-202ENST00000279550 C9orf64Q5T6V5 341 aa20.68■□□□□ 0.9
YBX3-202ENST00000279550 SNX32Q86XE0 403 aa20.68■□□□□ 0.9
YBX3-202ENST00000279550 PELI3Q8N2H9 469 aa20.68■□□□□ 0.9
YBX3-202ENST00000279550 AFAP1L2Q8N4X5 818 aa20.68■□□□□ 0.9
YBX3-202ENST00000279550 ACTRT2Q8TDY3 377 aa20.68■□□□□ 0.9
YBX3-202ENST00000279550 TRPC4APQ8TEL6 797 aa20.68■□□□□ 0.9
YBX3-202ENST00000279550 PLEKHG4BQ96PX9 1271 aa20.68■□□□□ 0.9
YBX3-202ENST00000279550 ZDHHC4Q9NPG8 344 aa20.68■□□□□ 0.9
YBX3-202ENST00000279550 GNPTGQ9UJJ9 305 aa20.68■□□□□ 0.9
YBX3-202ENST00000279550 PLXNB3Q9ULL4 1909 aa20.68■□□□□ 0.9
YBX3-202ENST00000279550 K7EQS6 105 aa20.67■□□□□ 0.9
YBX3-202ENST00000279550 NARSO43776 548 aaKnown RBP20.67■□□□□ 0.9
YBX3-202ENST00000279550 CTSLP07711 333 aa20.67■□□□□ 0.9
YBX3-202ENST00000279550 GPR33Q49SQ1 333 aa20.67■□□□□ 0.9
YBX3-202ENST00000279550 ARSIQ5FYB1 569 aa20.67■□□□□ 0.9
YBX3-202ENST00000279550 UGT3A1Q6NUS8 523 aa20.67■□□□□ 0.9
YBX3-202ENST00000279550 GPSM1Q86YR5 675 aa20.67■□□□□ 0.9
YBX3-202ENST00000279550 SCUBE1Q8IWY4 988 aa20.67■□□□□ 0.9
YBX3-202ENST00000279550 ULK2Q8IYT8 1036 aa20.67■□□□□ 0.9
YBX3-202ENST00000279550 EZH1Q92800 747 aaPredicted RBP20.67■□□□□ 0.9
YBX3-202ENST00000279550 LRIG1Q96JA1 1093 aa20.67■□□□□ 0.9
YBX3-202ENST00000279550 ACOX2Q99424 681 aa20.67■□□□□ 0.9
YBX3-202ENST00000279550 MID1IP1Q9NPA3 183 aa20.67■□□□□ 0.9
YBX3-202ENST00000279550 CACNA2D2Q9NY47 1150 aa20.67■□□□□ 0.9
YBX3-202ENST00000279550 A0A088AWK7 358 aa20.67■□□□□ 0.9
YBX3-202ENST00000279550 SYCE1LA8MT33 242 aa20.67■□□□□ 0.9
YBX3-202ENST00000279550 AGAP14A8MT82 685 aa20.67■□□□□ 0.9
YBX3-202ENST00000279550 LOC730098B7Z3J9 87 aa20.67■□□□□ 0.9
YBX3-202ENST00000279550 MNAT1P51948 309 aa20.67■□□□□ 0.9
YBX3-202ENST00000279550 PTPN5P54829 565 aa20.67■□□□□ 0.9
YBX3-202ENST00000279550 FOXA1P55317 472 aa20.67■□□□□ 0.9
YBX3-202ENST00000279550 E2F5Q15329 346 aa20.67■□□□□ 0.9
YBX3-202ENST00000279550 KHDC1Q4VXA5 237 aaKnown RBP20.67■□□□□ 0.9
YBX3-202ENST00000279550 LYPLAL1Q5VWZ2 237 aa20.67■□□□□ 0.9
YBX3-202ENST00000279550 CHSY3Q70JA7 882 aa20.67■□□□□ 0.9
YBX3-202ENST00000279550 ARHGAP24Q8N264 748 aa20.67■□□□□ 0.9
YBX3-202ENST00000279550 ZNF513Q8N8E2 541 aaPredicted RBP20.67■□□□□ 0.9
YBX3-202ENST00000279550 CEP70Q8NHQ1 597 aa20.67■□□□□ 0.9
YBX3-202ENST00000279550 PBXIP1Q96AQ6 731 aa20.67■□□□□ 0.9
YBX3-202ENST00000279550 PDLIM5Q96HC4 596 aaKnown RBP20.67■□□□□ 0.9
YBX3-202ENST00000279550 C3orf30Q96M34 536 aa20.67■□□□□ 0.9
YBX3-202ENST00000279550 KCNA7Q96RP8 456 aa20.67■□□□□ 0.9
YBX3-202ENST00000279550 ABCG8Q9H221 673 aa20.67■□□□□ 0.9
YBX3-202ENST00000279550 ASB1Q9Y576 335 aa20.67■□□□□ 0.9
YBX3-202ENST00000279550 COL6A3P12111 3177 aa20.66■□□□□ 0.9
YBX3-202ENST00000279550 A0A1W2PQ67 120 aa20.66■□□□□ 0.9
YBX3-202ENST00000279550 STX16-NPEPL1H3BU86 382 aa20.66■□□□□ 0.9
YBX3-202ENST00000279550 STX16O14662 325 aa20.66■□□□□ 0.9
YBX3-202ENST00000279550 KIR2DL1P43626 348 aaPredicted RBP20.66■□□□□ 0.9
YBX3-202ENST00000279550 CLCQ05315 142 aa20.66■□□□□ 0.9
YBX3-202ENST00000279550 TDGQ13569 410 aa20.66■□□□□ 0.9
YBX3-202ENST00000279550 ENPP2Q13822 863 aa20.66■□□□□ 0.9
YBX3-202ENST00000279550 ELAVL3Q14576 367 aaKnown RBP20.66■□□□□ 0.9
YBX3-202ENST00000279550 PON2Q15165 354 aa20.66■□□□□ 0.9
YBX3-202ENST00000279550 ATP13A5Q4VNC0 1218 aa20.66■□□□□ 0.9
YBX3-202ENST00000279550 ACSBG2Q5FVE4 666 aa20.66■□□□□ 0.9
YBX3-202ENST00000279550 BRAT1Q6PJG6 821 aa20.66■□□□□ 0.9
YBX3-202ENST00000279550 MAFAQ8NHW3 353 aaPredicted RBP20.66■□□□□ 0.9
YBX3-202ENST00000279550 ZNF483Q8TF39 744 aaPredicted RBP20.66■□□□□ 0.9
YBX3-202ENST00000279550 ESAMQ96AP7 390 aa20.66■□□□□ 0.9
YBX3-202ENST00000279550 RNPEPL1Q9HAU8 725 aa20.66■□□□□ 0.9
YBX3-202ENST00000279550 PRDM6Q9NQX0 595 aa20.66■□□□□ 0.9
YBX3-202ENST00000279550 PCTPQ9UKL6 214 aa20.66■□□□□ 0.9
YBX3-202ENST00000279550 TMPRSS11EQ9UL52 423 aa20.66■□□□□ 0.9
YBX3-202ENST00000279550 PTGDR2Q9Y5Y4 395 aa20.66■□□□□ 0.9
YBX3-202ENST00000279550 SLC22A2O15244 555 aa20.65■□□□□ 0.9
YBX3-202ENST00000279550 SLC25A14O95258 325 aaPredicted RBP20.65■□□□□ 0.9
YBX3-202ENST00000279550 TRIM16O95361 564 aa20.65■□□□□ 0.9
YBX3-202ENST00000279550 SRFP11831 508 aa20.65■□□□□ 0.9
YBX3-202ENST00000279550 B4GALNT1Q00973 533 aa20.65■□□□□ 0.9
YBX3-202ENST00000279550 TMEM196Q5HYL7 178 aa20.65■□□□□ 0.9
YBX3-202ENST00000279550 IER5LQ5T953 404 aa20.65■□□□□ 0.9
YBX3-202ENST00000279550 KANK2Q63ZY3 851 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms