RNA–Protein interactions for RNA: ENST00000264039.6

GPC1-201, Transcript of glypican 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC1, Length 3,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-201ENST00000264039 CRY1Q16526 586 aa16.11■□□□□ 0.17
GPC1-201ENST00000264039 SLC25A52Q3SY17 297 aa16.11■□□□□ 0.17
GPC1-201ENST00000264039 CCDC28AQ8IWP9 274 aa16.11■□□□□ 0.17
GPC1-201ENST00000264039 COLGALT2Q8IYK4 626 aa16.11■□□□□ 0.17
GPC1-201ENST00000264039 OR6Q1Q8NGQ2 317 aa16.11■□□□□ 0.17
GPC1-201ENST00000264039 PIK3R3Q92569 461 aa16.11■□□□□ 0.17
GPC1-201ENST00000264039 RHNO1Q9BSD3 238 aa16.11■□□□□ 0.17
GPC1-201ENST00000264039 GALPQ9UBC7 116 aa16.11■□□□□ 0.17
GPC1-201ENST00000264039 NUFIP1Q9UHK0 495 aaKnown RBP16.11■□□□□ 0.17
GPC1-201ENST00000264039 RAPGEFL1Q9UHV5 662 aa16.11■□□□□ 0.17
GPC1-201ENST00000264039 IKZF3Q9UKT9 509 aa16.11■□□□□ 0.17
GPC1-201ENST00000264039 UGT2B11O75310 529 aa16.1■□□□□ 0.17
GPC1-201ENST00000264039 SEC22BO75396 215 aa16.1■□□□□ 0.17
GPC1-201ENST00000264039 LCN8Q6JVE9 175 aa16.1■□□□□ 0.17
GPC1-201ENST00000264039 TTC29Q8NA56 475 aaPredicted RBP16.1■□□□□ 0.17
GPC1-201ENST00000264039 PCNPQ8WW12 178 aaKnown RBP16.1■□□□□ 0.17
GPC1-201ENST00000264039 AKT1S1Q96B36 256 aa16.1■□□□□ 0.17
GPC1-201ENST00000264039 CCDC120Q96HB5 630 aa16.1■□□□□ 0.17
GPC1-201ENST00000264039 ARPC5LQ9BPX5 153 aa16.1■□□□□ 0.17
GPC1-201ENST00000264039 TAS2R9Q9NYW1 312 aa16.1■□□□□ 0.17
GPC1-201ENST00000264039 CACNG4Q9UBN1 327 aa16.1■□□□□ 0.17
GPC1-201ENST00000264039 HSPB11Q9Y547 144 aa16.1■□□□□ 0.17
GPC1-201ENST00000264039 A0A1W2PP18 115 aa16.1■□□□□ 0.17
GPC1-201ENST00000264039 CDK14O94921 469 aa16.1■□□□□ 0.17
GPC1-201ENST00000264039 DDX39BQ13838 428 aaKnown RBP16.1■□□□□ 0.17
GPC1-201ENST00000264039 TIGD6Q17RP2 521 aa16.1■□□□□ 0.17
GPC1-201ENST00000264039 DCLRE1AQ6PJP8 1040 aa16.1■□□□□ 0.17
GPC1-201ENST00000264039 FAM217AQ8IXS0 508 aa16.1■□□□□ 0.17
GPC1-201ENST00000264039 NLGN1Q8N2Q7 840 aa16.1■□□□□ 0.17
GPC1-201ENST00000264039 EIF2B3Q9NR50 452 aaKnown RBP16.1■□□□□ 0.17
GPC1-201ENST00000264039 FZD10Q9ULW2 581 aa16.1■□□□□ 0.17
GPC1-201ENST00000264039 STYXL1Q9Y6J8 313 aa16.1■□□□□ 0.17
GPC1-201ENST00000264039 BTN3A3O00478 584 aa16.1■□□□□ 0.17
GPC1-201ENST00000264039 MAFO75444 373 aaPredicted RBP16.1■□□□□ 0.17
GPC1-201ENST00000264039 UPK1BO75841 260 aa16.1■□□□□ 0.17
GPC1-201ENST00000264039 SERPINA1P01009 418 aa16.1■□□□□ 0.17
GPC1-201ENST00000264039 CYP11A1P05108 521 aa16.1■□□□□ 0.17
GPC1-201ENST00000264039 ARF4P18085 180 aaPredicted RBP16.1■□□□□ 0.17
GPC1-201ENST00000264039 SMARCB1Q12824 385 aa16.1■□□□□ 0.17
GPC1-201ENST00000264039 TSNQ15631 228 aaKnown RBP16.1■□□□□ 0.17
GPC1-201ENST00000264039 CYS1Q717R9 158 aa16.1■□□□□ 0.17
GPC1-201ENST00000264039 C16orf62Q7Z3J2 963 aa16.1■□□□□ 0.17
GPC1-201ENST00000264039 LRRC20Q8TCA0 184 aa16.1■□□□□ 0.17
GPC1-201ENST00000264039 MMP28Q9H239 520 aa16.1■□□□□ 0.17
GPC1-201ENST00000264039 KCTD3Q9Y597 815 aa16.1■□□□□ 0.17
GPC1-201ENST00000264039 TYW5A2RUC4 315 aaKnown RBP16.09■□□□□ 0.17
GPC1-201ENST00000264039 FAM172BPA6NC97 362 aa16.09■□□□□ 0.17
GPC1-201ENST00000264039 I3L521 148 aa16.09■□□□□ 0.17
GPC1-201ENST00000264039 ALDH2P05091 517 aa16.09■□□□□ 0.17
GPC1-201ENST00000264039 COL6A1P12109 1028 aa16.09■□□□□ 0.17
GPC1-201ENST00000264039 CYP2B6P20813 491 aa16.09■□□□□ 0.17
GPC1-201ENST00000264039 IMPDH1P20839 514 aa16.09■□□□□ 0.17
GPC1-201ENST00000264039 LRRC74AQ0VAA2 488 aa16.09■□□□□ 0.17
GPC1-201ENST00000264039 CRY2Q49AN0 593 aa16.09■□□□□ 0.17
GPC1-201ENST00000264039 FBXO47Q5MNV8 452 aa16.09■□□□□ 0.17
GPC1-201ENST00000264039 TXNDC11Q6PKC3 985 aa16.09■□□□□ 0.17
GPC1-201ENST00000264039 AMIGO1Q86WK6 493 aa16.09■□□□□ 0.17
GPC1-201ENST00000264039 FBXO16Q8IX29 292 aaPredicted RBP16.09■□□□□ 0.17
GPC1-201ENST00000264039 NIM1KQ8IY84 436 aa16.09■□□□□ 0.17
GPC1-201ENST00000264039 DTWD1Q8N5C7 304 aa16.09■□□□□ 0.17
GPC1-201ENST00000264039 ST13P5Q8NFI4 369 aaPredicted RBP16.09■□□□□ 0.17
GPC1-201ENST00000264039 TRIM54Q9BYV2 358 aa16.09■□□□□ 0.17
GPC1-201ENST00000264039 MEAF6Q9HAF1 191 aa16.09■□□□□ 0.17
GPC1-201ENST00000264039 LATS2Q9NRM7 1088 aa16.09■□□□□ 0.17
GPC1-201ENST00000264039 ZNF224Q9NZL3 707 aa16.09■□□□□ 0.17
GPC1-201ENST00000264039 DNAJB9Q9UBS3 223 aa16.09■□□□□ 0.17
GPC1-201ENST00000264039 PIN4Q9Y237 131 aaKnown RBP16.09■□□□□ 0.17
GPC1-201ENST00000264039 H0YAE9 185 aa16.09■□□□□ 0.17
GPC1-201ENST00000264039 PSIP1O75475 530 aaKnown RBP16.09■□□□□ 0.17
GPC1-201ENST00000264039 INSRRP14616 1297 aa16.09■□□□□ 0.17
GPC1-201ENST00000264039 SPNP16150 400 aa16.09■□□□□ 0.17
GPC1-201ENST00000264039 GRIK1P39086 918 aa16.09■□□□□ 0.17
GPC1-201ENST00000264039 ZNF267Q14586 743 aaPredicted RBP16.09■□□□□ 0.17
GPC1-201ENST00000264039 ZNF648Q5T619 568 aaPredicted RBP16.09■□□□□ 0.17
GPC1-201ENST00000264039 MRNIPQ6NTE8 343 aa16.09■□□□□ 0.17
GPC1-201ENST00000264039 FAM131AQ6UXB0 335 aa16.09■□□□□ 0.17
GPC1-201ENST00000264039 RHOXF1Q8NHV9 184 aa16.09■□□□□ 0.17
GPC1-201ENST00000264039 UBE2FQ969M7 185 aa16.09■□□□□ 0.17
GPC1-201ENST00000264039 DUSP12Q9UNI6 340 aa16.09■□□□□ 0.17
GPC1-201ENST00000264039 ZNF451Q9Y4E5 1061 aa16.09■□□□□ 0.17
GPC1-201ENST00000264039 NCAM2O15394 837 aa16.09■□□□□ 0.17
GPC1-201ENST00000264039 PSMD3O43242 534 aa16.09■□□□□ 0.17
GPC1-201ENST00000264039 CCNYL3P0C7X3 344 aa16.09■□□□□ 0.17
GPC1-201ENST00000264039 SLC2A3P11169 496 aa16.09■□□□□ 0.17
GPC1-201ENST00000264039 PON2Q15165 354 aa16.09■□□□□ 0.17
GPC1-201ENST00000264039 AP5B1Q2VPB7 878 aa16.09■□□□□ 0.17
GPC1-201ENST00000264039 FAM174BQ3ZCQ3 159 aa16.09■□□□□ 0.17
GPC1-201ENST00000264039 ZRANB3Q5FWF4 1079 aa16.09■□□□□ 0.17
GPC1-201ENST00000264039 METTL4Q8N3J2 472 aa16.09■□□□□ 0.17
GPC1-201ENST00000264039 KBTBD8Q8NFY9 601 aa16.09■□□□□ 0.17
GPC1-201ENST00000264039 ZSCAN5AQ9BUG6 496 aa16.09■□□□□ 0.17
GPC1-201ENST00000264039 OR2B2Q9GZK3 357 aa16.09■□□□□ 0.17
GPC1-201ENST00000264039 AS3MTQ9HBK9 375 aa16.09■□□□□ 0.17
GPC1-201ENST00000264039 CPNE5Q9HCH3 593 aa16.09■□□□□ 0.17
GPC1-201ENST00000264039 PKP3Q9Y446 797 aa16.09■□□□□ 0.17
GPC1-201ENST00000264039 NAV1Q8NEY1 1877 aa16.09■□□□□ 0.17
GPC1-201ENST00000264039 ELOVL7A1L3X0 281 aa16.08■□□□□ 0.17
GPC1-201ENST00000264039 MAGEA6P43360 314 aa16.08■□□□□ 0.17
GPC1-201ENST00000264039 GLUD2P49448 558 aa16.08■□□□□ 0.17
GPC1-201ENST00000264039 RAD51Q06609 339 aa16.08■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms