RNA–Protein interactions for RNA: ENST00000264010.8

CTCF-201, Transcript of CCCTC-binding factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTCF, Length 3,939 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-201ENST00000264010 HOXD9P28356 352 aaPredicted RBP16.1■□□□□ 0.17
CTCF-201ENST00000264010 TRAP1Q12931 704 aaKnown RBP16.1■□□□□ 0.17
CTCF-201ENST00000264010 PRKG2Q13237 762 aa16.1■□□□□ 0.17
CTCF-201ENST00000264010 GPR107Q5VW38 600 aa16.1■□□□□ 0.17
CTCF-201ENST00000264010 PTERQ96BW5 349 aa16.1■□□□□ 0.17
CTCF-201ENST00000264010 CRISPLD1Q9H336 500 aa16.1■□□□□ 0.17
CTCF-201ENST00000264010 FBRSL1Q9HCM7 1045 aaKnown RBP16.1■□□□□ 0.17
CTCF-201ENST00000264010 AP4B1Q9Y6B7 739 aa16.1■□□□□ 0.17
CTCF-201ENST00000264010 GOLGA4Q13439 2230 aaKnown RBP16.1■□□□□ 0.17
CTCF-201ENST00000264010 MYOCOSA0A1B0GUC4 107 aa16.1■□□□□ 0.17
CTCF-201ENST00000264010 SAC3D1A6NKF1 404 aa16.1■□□□□ 0.17
CTCF-201ENST00000264010 WBP4O75554 376 aaKnown RBP16.1■□□□□ 0.17
CTCF-201ENST00000264010 ACADVLP49748 655 aa16.1■□□□□ 0.17
CTCF-201ENST00000264010 LSM3P62310 102 aaKnown RBP16.1■□□□□ 0.17
CTCF-201ENST00000264010 MAD2L1Q13257 205 aaPredicted RBP16.1■□□□□ 0.17
CTCF-201ENST00000264010 OR4D1Q15615 310 aa16.1■□□□□ 0.17
CTCF-201ENST00000264010 SLC14A2Q15849 920 aa16.1■□□□□ 0.17
CTCF-201ENST00000264010 SERPINA9Q86WD7 417 aa16.1■□□□□ 0.17
CTCF-201ENST00000264010 OR9I1Q8NGQ6 314 aa16.1■□□□□ 0.17
CTCF-201ENST00000264010 ACTR8Q9H981 624 aa16.1■□□□□ 0.17
CTCF-201ENST00000264010 ADAMTS6Q9UKP5 1117 aa16.1■□□□□ 0.17
CTCF-201ENST00000264010 BAG5Q9UL15 447 aa16.1■□□□□ 0.17
CTCF-201ENST00000264010 GJB3O75712 270 aa16.1■□□□□ 0.17
CTCF-201ENST00000264010 ZBTB11O95625 1053 aaPredicted RBP16.1■□□□□ 0.17
CTCF-201ENST00000264010 IGLV3-27P01718 113 aa16.1■□□□□ 0.17
CTCF-201ENST00000264010 SBK3P0C264 359 aa16.1■□□□□ 0.17
CTCF-201ENST00000264010 C1QTNF8P60827 252 aa16.1■□□□□ 0.17
CTCF-201ENST00000264010 TSTA3Q13630 321 aaPredicted RBP16.1■□□□□ 0.17
CTCF-201ENST00000264010 INO80DQ53TQ3 878 aaPredicted RBP16.1■□□□□ 0.17
CTCF-201ENST00000264010 PIGGQ5H8A4 983 aa16.1■□□□□ 0.17
CTCF-201ENST00000264010 KBTBD6Q86V97 674 aa16.1■□□□□ 0.17
CTCF-201ENST00000264010 CAMK1DQ8IU85 385 aa16.1■□□□□ 0.17
CTCF-201ENST00000264010 FAM126BQ8IXS8 530 aa16.1■□□□□ 0.17
CTCF-201ENST00000264010 DNAJB14Q8TBM8 379 aa16.1■□□□□ 0.17
CTCF-201ENST00000264010 ELMO1Q92556 727 aa16.1■□□□□ 0.17
CTCF-201ENST00000264010 MARCH7Q9H992 704 aa16.1■□□□□ 0.17
CTCF-201ENST00000264010 FAM8A1Q9UBU6 413 aa16.1■□□□□ 0.17
CTCF-201ENST00000264010 PRKAG2Q9UGJ0 569 aa16.1■□□□□ 0.17
CTCF-201ENST00000264010 ITGB1BP2Q9UKP3 347 aa16.1■□□□□ 0.17
CTCF-201ENST00000264010 SCN10AQ9Y5Y9 1956 aa16.1■□□□□ 0.17
CTCF-201ENST00000264010 J3QRK9 145 aa16.09■□□□□ 0.17
CTCF-201ENST00000264010 STX16O14662 325 aa16.09■□□□□ 0.17
CTCF-201ENST00000264010 RGS14O43566 566 aa16.09■□□□□ 0.17
CTCF-201ENST00000264010 PLIN5Q00G26 463 aa16.09■□□□□ 0.17
CTCF-201ENST00000264010 ZNF423Q2M1K9 1284 aa16.09■□□□□ 0.17
CTCF-201ENST00000264010 SFT2D3Q587I9 215 aa16.09■□□□□ 0.17
CTCF-201ENST00000264010 TXNDC8Q6A555 127 aa16.09■□□□□ 0.17
CTCF-201ENST00000264010 CNKSR3Q6P9H4 555 aa16.09■□□□□ 0.17
CTCF-201ENST00000264010 RSPO2Q6UXX9 243 aaPredicted RBP16.09■□□□□ 0.17
CTCF-201ENST00000264010 MICU2Q8IYU8 434 aa16.09■□□□□ 0.17
CTCF-201ENST00000264010 TOP1MTQ969P6 601 aa16.09■□□□□ 0.17
CTCF-201ENST00000264010 ESAMQ96AP7 390 aa16.09■□□□□ 0.17
CTCF-201ENST00000264010 FBXL8Q96CD0 374 aa16.09■□□□□ 0.17
CTCF-201ENST00000264010 GPATCH1Q9BRR8 931 aaKnown RBP16.09■□□□□ 0.17
CTCF-201ENST00000264010 PCDHAC1Q9H158 963 aa16.09■□□□□ 0.17
CTCF-201ENST00000264010 OCEL1Q9H607 264 aa16.09■□□□□ 0.17
CTCF-201ENST00000264010 C2orf78A6NCI8 922 aa16.09■□□□□ 0.17
CTCF-201ENST00000264010 TARM1B6A8C7 271 aa16.09■□□□□ 0.17
CTCF-201ENST00000264010 SLC25A14O95258 325 aaPredicted RBP16.09■□□□□ 0.17
CTCF-201ENST00000264010 KRT6AP02538 564 aa16.09■□□□□ 0.17
CTCF-201ENST00000264010 KRT6BP04259 564 aa16.09■□□□□ 0.17
CTCF-201ENST00000264010 KRT6CP48668 564 aa16.09■□□□□ 0.17
CTCF-201ENST00000264010 PIK3CGP48736 1102 aa16.09■□□□□ 0.17
CTCF-201ENST00000264010 LYSMD3Q7Z3D4 306 aa16.09■□□□□ 0.17
CTCF-201ENST00000264010 TSPAN14Q8NG11 270 aa16.09■□□□□ 0.17
CTCF-201ENST00000264010 CDC26Q8NHZ8 85 aa16.09■□□□□ 0.17
CTCF-201ENST00000264010 KCNJ9Q92806 393 aa16.09■□□□□ 0.17
CTCF-201ENST00000264010 ACDQ96AP0 544 aa16.09■□□□□ 0.17
CTCF-201ENST00000264010 RMND5BQ96G75 393 aaPredicted RBP16.09■□□□□ 0.17
CTCF-201ENST00000264010 CIPCQ9C0C6 399 aa16.09■□□□□ 0.17
CTCF-201ENST00000264010 RAB26Q9ULW5 256 aa16.09■□□□□ 0.17
CTCF-201ENST00000264010 MICAL3Q7RTP6 2002 aa16.09■□□□□ 0.17
CTCF-201ENST00000264010 GLYATL1P3A0A0U1RQE8 302 aa16.09■□□□□ 0.17
CTCF-201ENST00000264010 OR4F21O95013 312 aa16.09■□□□□ 0.17
CTCF-201ENST00000264010 OR56A5P0C7T3 313 aa16.09■□□□□ 0.17
CTCF-201ENST00000264010 PRSS56P0CW18 603 aa16.09■□□□□ 0.17
CTCF-201ENST00000264010 MZF1P28698 734 aaPredicted RBP16.09■□□□□ 0.17
CTCF-201ENST00000264010 INHBCP55103 352 aa16.09■□□□□ 0.17
CTCF-201ENST00000264010 CYP51A1Q16850 503 aa16.09■□□□□ 0.17
CTCF-201ENST00000264010 TJAP1Q5JTD0 557 aa16.09■□□□□ 0.17
CTCF-201ENST00000264010 DCAF4L2Q8NA75 395 aa16.09■□□□□ 0.17
CTCF-201ENST00000264010 OR2T34Q8NGX1 318 aa16.09■□□□□ 0.17
CTCF-201ENST00000264010 OR2T3Q8NH03 318 aa16.09■□□□□ 0.17
CTCF-201ENST00000264010 EEF1AKMT1Q8WVE0 214 aa16.09■□□□□ 0.17
CTCF-201ENST00000264010 PPP3R2Q96LZ3 170 aa16.09■□□□□ 0.17
CTCF-201ENST00000264010 THUMPD3Q9BV44 507 aaKnown RBP16.09■□□□□ 0.17
CTCF-201ENST00000264010 DPY30Q9C005 99 aa16.09■□□□□ 0.17
CTCF-201ENST00000264010 NOL11Q9H8H0 719 aaKnown RBP16.09■□□□□ 0.17
CTCF-201ENST00000264010 ASAH2Q9NR71 780 aa16.09■□□□□ 0.17
CTCF-201ENST00000264010 VPS51Q9UID3 782 aa16.09■□□□□ 0.17
CTCF-201ENST00000264010 C9JVG2 144 aa16.08■□□□□ 0.17
CTCF-201ENST00000264010 ZDHHC11BP0C7U3 371 aa16.08■□□□□ 0.17
CTCF-201ENST00000264010 HPCAP84074 193 aa16.08■□□□□ 0.17
CTCF-201ENST00000264010 NFKB2Q00653 900 aa16.08■□□□□ 0.17
CTCF-201ENST00000264010 ADRM1Q16186 407 aa16.08■□□□□ 0.17
CTCF-201ENST00000264010 CORO1BQ9BR76 489 aa16.08■□□□□ 0.17
CTCF-201ENST00000264010 ASB3Q9Y575 518 aa16.08■□□□□ 0.17
CTCF-201ENST00000264010 ASLP04424 464 aa16.08■□□□□ 0.16
CTCF-201ENST00000264010 ZNF140P52738 457 aaPredicted RBP16.08■□□□□ 0.16
CTCF-201ENST00000264010 TIGD2Q4W5G0 525 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms