RNA–Protein interactions for RNA: ENST00000263741.11

SDF4-201, Transcript of stromal cell derived factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDF4, Length 2,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-201ENST00000263741 LRRC39Q96DD0 335 aa18.06■□□□□ 0.48
SDF4-201ENST00000263741 IARS2Q9NSE4 1012 aaKnown RBP18.06■□□□□ 0.48
SDF4-201ENST00000263741 KLC4Q9NSK0 619 aa18.06■□□□□ 0.48
SDF4-201ENST00000263741 SPATS2LQ9NUQ6 558 aaKnown RBP18.06■□□□□ 0.48
SDF4-201ENST00000263741 SLC30A4O14863 429 aa18.05■□□□□ 0.48
SDF4-201ENST00000263741 ATP1B2P14415 290 aaPredicted RBP18.05■□□□□ 0.48
SDF4-201ENST00000263741 SSTR1P30872 391 aa18.05■□□□□ 0.48
SDF4-201ENST00000263741 THOC5Q13769 683 aaKnown RBP18.05■□□□□ 0.48
SDF4-201ENST00000263741 SUZ12Q15022 739 aaKnown RBP18.05■□□□□ 0.48
SDF4-201ENST00000263741 SEPT7Q16181 437 aaKnown RBP18.05■□□□□ 0.48
SDF4-201ENST00000263741 FAM46DQ8NEK8 389 aa18.05■□□□□ 0.48
SDF4-201ENST00000263741 AENQ8WTP8 325 aaKnown RBP18.05■□□□□ 0.48
SDF4-201ENST00000263741 PYROXD1Q8WU10 500 aa18.05■□□□□ 0.48
SDF4-201ENST00000263741 SGSM3Q96HU1 749 aa18.05■□□□□ 0.48
SDF4-201ENST00000263741 GSDMCQ9BYG8 508 aa18.05■□□□□ 0.48
SDF4-201ENST00000263741 TAAR2Q9P1P5 351 aa18.05■□□□□ 0.48
SDF4-201ENST00000263741 PCOLCE2Q9UKZ9 415 aa18.05■□□□□ 0.48
SDF4-201ENST00000263741 NFU1Q9UMS0 254 aa18.05■□□□□ 0.48
SDF4-201ENST00000263741 UBA6A0AVT1 1052 aaPredicted RBP18.05■□□□□ 0.48
SDF4-201ENST00000263741 CFAP99D6REC4 459 aa18.05■□□□□ 0.48
SDF4-201ENST00000263741 KMOO15229 486 aa18.05■□□□□ 0.48
SDF4-201ENST00000263741 SNX2O60749 519 aa18.05■□□□□ 0.48
SDF4-201ENST00000263741 RALBP11234 206 aa18.05■□□□□ 0.48
SDF4-201ENST00000263741 ZNF7P17097 686 aaPredicted RBP18.05■□□□□ 0.48
SDF4-201ENST00000263741 TNFRSF8P28908 595 aa18.05■□□□□ 0.48
SDF4-201ENST00000263741 PMLP29590 882 aa18.05■□□□□ 0.48
SDF4-201ENST00000263741 SLC1A2P43004 574 aa18.05■□□□□ 0.48
SDF4-201ENST00000263741 MPP1Q00013 466 aa18.05■□□□□ 0.48
SDF4-201ENST00000263741 ARMC3Q5W041 872 aa18.05■□□□□ 0.48
SDF4-201ENST00000263741 STEAP4Q687X5 459 aa18.05■□□□□ 0.48
SDF4-201ENST00000263741 EMBQ6PCB8 327 aa18.05■□□□□ 0.48
SDF4-201ENST00000263741 DBX2Q6ZNG2 339 aa18.05■□□□□ 0.48
SDF4-201ENST00000263741 GKN2Q86XP6 184 aa18.05■□□□□ 0.48
SDF4-201ENST00000263741 LILRA3Q8N6C8 439 aaPredicted RBP18.05■□□□□ 0.48
SDF4-201ENST00000263741 OR4C6Q8NH72 309 aa18.05■□□□□ 0.48
SDF4-201ENST00000263741 CERS2Q96G23 380 aa18.05■□□□□ 0.48
SDF4-201ENST00000263741 NAT9Q9BTE0 207 aa18.05■□□□□ 0.48
SDF4-201ENST00000263741 PPANQ9NQ55 473 aaKnown RBP18.05■□□□□ 0.48
SDF4-201ENST00000263741 FBXO6Q9NRD1 293 aaPredicted RBP18.05■□□□□ 0.48
SDF4-201ENST00000263741 NEMP2A6NFY4 417 aa18.04■□□□□ 0.48
SDF4-201ENST00000263741 GPR89AB7ZAQ6 455 aa18.04■□□□□ 0.48
SDF4-201ENST00000263741 GIPC1O14908 333 aa18.04■□□□□ 0.48
SDF4-201ENST00000263741 POP7O75817 140 aaKnown RBP18.04■□□□□ 0.48
SDF4-201ENST00000263741 TTC4O95801 387 aa18.04■□□□□ 0.48
SDF4-201ENST00000263741 GPR89BP0CG08 455 aa18.04■□□□□ 0.48
SDF4-201ENST00000263741 ITGB6P18564 788 aa18.04■□□□□ 0.48
SDF4-201ENST00000263741 ABCG1P45844 678 aa18.04■□□□□ 0.48
SDF4-201ENST00000263741 ITIH4Q14624 930 aa18.04■□□□□ 0.48
SDF4-201ENST00000263741 AARS2Q5JTZ9 985 aaKnown RBP18.04■□□□□ 0.48
SDF4-201ENST00000263741 MRNIPQ6NTE8 343 aa18.04■□□□□ 0.48
SDF4-201ENST00000263741 NAPRTQ6XQN6 538 aa18.04■□□□□ 0.48
SDF4-201ENST00000263741 FAM83HQ6ZRV2 1179 aaPredicted RBP18.04■□□□□ 0.48
SDF4-201ENST00000263741 PIP4P1Q86T03 277 aa18.04■□□□□ 0.48
SDF4-201ENST00000263741 CILP2Q8IUL8 1156 aa18.04■□□□□ 0.48
SDF4-201ENST00000263741 SPNS2Q8IVW8 549 aa18.04■□□□□ 0.48
SDF4-201ENST00000263741 KYQ8NBH2 561 aa18.04■□□□□ 0.48
SDF4-201ENST00000263741 LKAAEAR1Q8TD35 194 aa18.04■□□□□ 0.48
SDF4-201ENST00000263741 RUFY1Q96T51 708 aa18.04■□□□□ 0.48
SDF4-201ENST00000263741 DPEP2Q9H4A9 486 aa18.04■□□□□ 0.48
SDF4-201ENST00000263741 NLGN3Q9NZ94 848 aa18.04■□□□□ 0.48
SDF4-201ENST00000263741 GULP1Q9UBP9 304 aa18.04■□□□□ 0.48
SDF4-201ENST00000263741 TBC1D29Q9UFV1 150 aa18.04■□□□□ 0.48
SDF4-201ENST00000263741 CRYL1Q9Y2S2 319 aa18.04■□□□□ 0.48
SDF4-201ENST00000263741 CSNK1G3Q9Y6M4 447 aa18.04■□□□□ 0.48
SDF4-201ENST00000263741 IQCF5A8MTL0 148 aa18.03■□□□□ 0.48
SDF4-201ENST00000263741 TM4SF5O14894 197 aa18.03■□□□□ 0.48
SDF4-201ENST00000263741 SYF2O95926 243 aaKnown RBP18.03■□□□□ 0.48
SDF4-201ENST00000263741 TTPAP49638 278 aa18.03■□□□□ 0.48
SDF4-201ENST00000263741 PRLHRP49683 370 aa18.03■□□□□ 0.48
SDF4-201ENST00000263741 EIF3BP55884 814 aaKnown RBP18.03■□□□□ 0.48
SDF4-201ENST00000263741 NFE2L1Q14494 772 aa18.03■□□□□ 0.48
SDF4-201ENST00000263741 TYSND1Q2T9J0 566 aa18.03■□□□□ 0.48
SDF4-201ENST00000263741 PACS1Q6VY07 963 aa18.03■□□□□ 0.48
SDF4-201ENST00000263741 CERS6Q6ZMG9 384 aa18.03■□□□□ 0.48
SDF4-201ENST00000263741 FAM76AQ8TAV0 307 aa18.03■□□□□ 0.48
SDF4-201ENST00000263741 FMO2Q99518 471 aa18.03■□□□□ 0.48
SDF4-201ENST00000263741 GPR34Q9UPC5 381 aa18.03■□□□□ 0.48
SDF4-201ENST00000263741 DCDC2BA2VCK2 349 aa18.03■□□□□ 0.48
SDF4-201ENST00000263741 EIF3HO15372 352 aaKnown RBP eCLIP18.03■□□□□ 0.48
SDF4-201ENST00000263741 OPA1O60313 960 aa18.03■□□□□ 0.48
SDF4-201ENST00000263741 CBFA2T3O75081 653 aa18.03■□□□□ 0.48
SDF4-201ENST00000263741 NDUFS3O75489 264 aa18.03■□□□□ 0.48
SDF4-201ENST00000263741 RPL10P27635 214 aaKnown RBP18.03■□□□□ 0.48
SDF4-201ENST00000263741 NSG1P42857 185 aa18.03■□□□□ 0.48
SDF4-201ENST00000263741 MAGEA4P43358 317 aa18.03■□□□□ 0.48
SDF4-201ENST00000263741 DNAJC3Q13217 504 aa18.03■□□□□ 0.48
SDF4-201ENST00000263741 BCL7AQ4VC05 210 aa18.03■□□□□ 0.48
SDF4-201ENST00000263741 C6orf132Q5T0Z8 1188 aa18.03■□□□□ 0.48
SDF4-201ENST00000263741 IFT20Q8IY31 132 aa18.03■□□□□ 0.48
SDF4-201ENST00000263741 SLC35F3Q8IY50 421 aa18.03■□□□□ 0.48
SDF4-201ENST00000263741 FAM136AQ96C01 138 aa18.03■□□□□ 0.48
SDF4-201ENST00000263741 APOLD1Q96LR9 279 aa18.03■□□□□ 0.48
SDF4-201ENST00000263741 PRDM8Q9NQV8 689 aa18.03■□□□□ 0.48
SDF4-201ENST00000263741 MTRF1LQ9UGC7 380 aaKnown RBP18.03■□□□□ 0.48
SDF4-201ENST00000263741 TRBV23OR9-2A0A075B6M9 112 aa18.02■□□□□ 0.48
SDF4-201ENST00000263741 OGNP20774 298 aaKnown RBP18.02■□□□□ 0.48
SDF4-201ENST00000263741 GPX6P59796 221 aa18.02■□□□□ 0.48
SDF4-201ENST00000263741 LRP8Q14114 963 aa18.02■□□□□ 0.48
SDF4-201ENST00000263741 INAVAQ3KP66 663 aa18.02■□□□□ 0.48
SDF4-201ENST00000263741 LYPLAL1Q5VWZ2 237 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms