RNA–Protein interactions for RNA: ENST00000263309.7

CLNS1A-201, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3 BASIC

Gene CLNS1A, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-201ENST00000263309 ELK3P41970 407 aa12.36□□□□□ -0.43
CLNS1A-201ENST00000263309 SKIV2L2P42285 1042 aaKnown RBP12.36□□□□□ -0.43
CLNS1A-201ENST00000263309 SLC12A2P55011 1212 aa12.36□□□□□ -0.43
CLNS1A-201ENST00000263309 SLC7A5Q01650 507 aa12.36□□□□□ -0.43
CLNS1A-201ENST00000263309 BCL7AQ4VC05 210 aa12.36□□□□□ -0.43
CLNS1A-201ENST00000263309 C14orf28Q4W4Y0 310 aa12.36□□□□□ -0.43
CLNS1A-201ENST00000263309 CCDC157Q569K6 752 aa12.36□□□□□ -0.43
CLNS1A-201ENST00000263309 KIAA0408Q6ZU52 694 aa12.36□□□□□ -0.43
CLNS1A-201ENST00000263309 C3orf62Q6ZUJ4 267 aa12.36□□□□□ -0.43
CLNS1A-201ENST00000263309 OTOAQ7RTW8 1153 aa12.36□□□□□ -0.43
CLNS1A-201ENST00000263309 ABCA7Q8IZY2 2146 aa12.36□□□□□ -0.43
CLNS1A-201ENST00000263309 RASGEF1AQ8N9B8 481 aa12.36□□□□□ -0.43
CLNS1A-201ENST00000263309 FBXO36Q8NEA4 188 aa12.36□□□□□ -0.43
CLNS1A-201ENST00000263309 OR13J1Q8NGT2 312 aa12.36□□□□□ -0.43
CLNS1A-201ENST00000263309 OR2L2Q8NH16 312 aa12.36□□□□□ -0.43
CLNS1A-201ENST00000263309 HM13Q8TCT9 377 aa12.36□□□□□ -0.43
CLNS1A-201ENST00000263309 ELMO1Q92556 727 aa12.36□□□□□ -0.43
CLNS1A-201ENST00000263309 UBXN4Q92575 508 aa12.36□□□□□ -0.43
CLNS1A-201ENST00000263309 SIGLEC10Q96LC7 697 aa12.36□□□□□ -0.43
CLNS1A-201ENST00000263309 LINC00615Q96LM1 132 aaPredicted RBP12.36□□□□□ -0.43
CLNS1A-201ENST00000263309 DPYSL5Q9BPU6 564 aa12.36□□□□□ -0.43
CLNS1A-201ENST00000263309 CCDC77Q9BR77 488 aa12.36□□□□□ -0.43
CLNS1A-201ENST00000263309 TREX1Q9NSU2 369 aa12.36□□□□□ -0.43
CLNS1A-201ENST00000263309 UCKL1Q9NWZ5 548 aa12.36□□□□□ -0.43
CLNS1A-201ENST00000263309 DNAJC16Q9Y2G8 782 aa12.36□□□□□ -0.43
CLNS1A-201ENST00000263309 TRPM6Q9BX84 2022 aa12.36□□□□□ -0.43
CLNS1A-201ENST00000263309 ANKRD36A6QL64 1941 aa12.35□□□□□ -0.43
CLNS1A-201ENST00000263309 TRBV5-4A0A0C4DH59 114 aa12.35□□□□□ -0.43
CLNS1A-201ENST00000263309 DCDC2BA2VCK2 349 aa12.35□□□□□ -0.43
CLNS1A-201ENST00000263309 CCL22O00626 93 aa12.35□□□□□ -0.43
CLNS1A-201ENST00000263309 CTIFO43310 598 aaKnown RBP12.35□□□□□ -0.43
CLNS1A-201ENST00000263309 NUDT21O43809 227 aaKnown RBP12.35□□□□□ -0.43
CLNS1A-201ENST00000263309 RFPL3O75679 317 aa12.35□□□□□ -0.43
CLNS1A-201ENST00000263309 F3P13726 295 aa12.35□□□□□ -0.43
CLNS1A-201ENST00000263309 ACP1P24666 158 aa12.35□□□□□ -0.43
CLNS1A-201ENST00000263309 IVDP26440 423 aa12.35□□□□□ -0.43
CLNS1A-201ENST00000263309 PBLDP30039 288 aaPredicted RBP12.35□□□□□ -0.43
CLNS1A-201ENST00000263309 GPR3P46089 330 aa12.35□□□□□ -0.43
CLNS1A-201ENST00000263309 DBN1Q16643 649 aa12.35□□□□□ -0.43
CLNS1A-201ENST00000263309 LGSNQ5TDP6 509 aa12.35□□□□□ -0.43
CLNS1A-201ENST00000263309 ZNF470Q6ECI4 717 aa12.35□□□□□ -0.43
CLNS1A-201ENST00000263309 LRRC8EQ6NSJ5 796 aa12.35□□□□□ -0.43
CLNS1A-201ENST00000263309 PSAPL1Q6NUJ1 521 aa12.35□□□□□ -0.43
CLNS1A-201ENST00000263309 ARMC6Q6NXE6 501 aa12.35□□□□□ -0.43
CLNS1A-201ENST00000263309 CES3Q6UWW8 571 aa12.35□□□□□ -0.43
CLNS1A-201ENST00000263309 WASH2PQ6VEQ5 465 aa12.35□□□□□ -0.43
CLNS1A-201ENST00000263309 GLRX5Q86SX6 157 aa12.35□□□□□ -0.43
CLNS1A-201ENST00000263309 PIP4P1Q86T03 277 aa12.35□□□□□ -0.43
CLNS1A-201ENST00000263309 ANKMY2Q8IV38 441 aa12.35□□□□□ -0.43
CLNS1A-201ENST00000263309 SKA2Q8WVK7 121 aaPredicted RBP12.35□□□□□ -0.43
CLNS1A-201ENST00000263309 ZFPM2Q8WW38 1151 aa12.35□□□□□ -0.43
CLNS1A-201ENST00000263309 GRAMD1AQ96CP6 724 aa12.35□□□□□ -0.43
CLNS1A-201ENST00000263309 CERS2Q96G23 380 aa12.35□□□□□ -0.43
CLNS1A-201ENST00000263309 VPS39Q96JC1 886 aa12.35□□□□□ -0.43
CLNS1A-201ENST00000263309 FMO2Q99518 471 aa12.35□□□□□ -0.43
CLNS1A-201ENST00000263309 BOCQ9BWV1 1114 aa12.35□□□□□ -0.43
CLNS1A-201ENST00000263309 EPB41L1Q9H4G0 881 aa12.35□□□□□ -0.43
CLNS1A-201ENST00000263309 WASH6PQ9NQA3 447 aa12.35□□□□□ -0.43
CLNS1A-201ENST00000263309 LRIT1Q9P2V4 623 aa12.35□□□□□ -0.43
CLNS1A-201ENST00000263309 SLC2A6Q9UGQ3 507 aa12.35□□□□□ -0.43
CLNS1A-201ENST00000263309 KLF15Q9UIH9 416 aa12.35□□□□□ -0.43
CLNS1A-201ENST00000263309 CORO1CQ9ULV4 474 aaPredicted RBP12.35□□□□□ -0.43
CLNS1A-201ENST00000263309 CHMP2BQ9UQN3 213 aa12.35□□□□□ -0.43
CLNS1A-201ENST00000263309 KCNK6Q9Y257 313 aa12.35□□□□□ -0.43
CLNS1A-201ENST00000263309 PRKAB1Q9Y478 270 aa12.35□□□□□ -0.43
CLNS1A-201ENST00000263309 OAS3Q9Y6K5 1087 aaKnown RBP12.35□□□□□ -0.43
CLNS1A-201ENST00000263309 CHD8Q9HCK8 2581 aa12.34□□□□□ -0.43
CLNS1A-201ENST00000263309 VPS26AO75436 327 aa12.34□□□□□ -0.43
CLNS1A-201ENST00000263309 RHOXF2BP0C7M4 288 aa12.34□□□□□ -0.43
CLNS1A-201ENST00000263309 JUPP14923 745 aa12.34□□□□□ -0.43
CLNS1A-201ENST00000263309 RPS3P23396 243 aaKnown RBP eCLIP12.34□□□□□ -0.437e-6■□□□□ 8.7
CLNS1A-201ENST00000263309 FOXN2P32314 431 aa12.34□□□□□ -0.43
CLNS1A-201ENST00000263309 MAGEA3P43357 314 aa12.34□□□□□ -0.43
CLNS1A-201ENST00000263309 MAGEA4P43358 317 aa12.34□□□□□ -0.43
CLNS1A-201ENST00000263309 CD151P48509 253 aa12.34□□□□□ -0.43
CLNS1A-201ENST00000263309 CARSP49589 748 aaKnown RBP12.34□□□□□ -0.43
CLNS1A-201ENST00000263309 PRLHRP49683 370 aa12.34□□□□□ -0.43
CLNS1A-201ENST00000263309 ADARP55265 1226 aaKnown RBP12.34□□□□□ -0.43
CLNS1A-201ENST00000263309 EIF3BP55884 814 aaKnown RBP12.34□□□□□ -0.43
CLNS1A-201ENST00000263309 DMPKQ09013 629 aa12.34□□□□□ -0.43
CLNS1A-201ENST00000263309 MGAT5Q09328 741 aa12.34□□□□□ -0.43
CLNS1A-201ENST00000263309 FRG1Q14331 258 aaKnown RBP12.34□□□□□ -0.43
CLNS1A-201ENST00000263309 CRYMQ14894 314 aa12.34□□□□□ -0.43
CLNS1A-201ENST00000263309 SHBQ15464 509 aa12.34□□□□□ -0.43
CLNS1A-201ENST00000263309 TCEA2Q15560 299 aa12.34□□□□□ -0.43
CLNS1A-201ENST00000263309 CLPPQ16740 277 aaPredicted RBP12.34□□□□□ -0.43
CLNS1A-201ENST00000263309 PLA2G4EQ3MJ16 856 aa12.34□□□□□ -0.43
CLNS1A-201ENST00000263309 HSP90AA5PQ58FG0 334 aa12.34□□□□□ -0.43
CLNS1A-201ENST00000263309 PPM1JQ5JR12 505 aa12.34□□□□□ -0.43
CLNS1A-201ENST00000263309 TPRG1LQ5T0D9 272 aa12.34□□□□□ -0.43
CLNS1A-201ENST00000263309 ZNF648Q5T619 568 aaPredicted RBP12.34□□□□□ -0.43
CLNS1A-201ENST00000263309 AGAP9Q5VTM2 703 aa12.34□□□□□ -0.43
CLNS1A-201ENST00000263309 OGFOD3Q6PK18 319 aa12.34□□□□□ -0.43
CLNS1A-201ENST00000263309 TAOK1Q7L7X3 1001 aa12.34□□□□□ -0.43
CLNS1A-201ENST00000263309 PELI3Q8N2H9 469 aa12.34□□□□□ -0.43
CLNS1A-201ENST00000263309 PHC3Q8NDX5 983 aa12.34□□□□□ -0.43
CLNS1A-201ENST00000263309 OR10G6Q8NH81 332 aa12.34□□□□□ -0.43
CLNS1A-201ENST00000263309 IFI44Q8TCB0 444 aa12.34□□□□□ -0.43
CLNS1A-201ENST00000263309 CNTNAP3BQ96NU0 1288 aa12.34□□□□□ -0.43
CLNS1A-201ENST00000263309 RHOXF2Q9BQY4 288 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms