RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 SLC39A7Q92504 469 aa5.53□□□□□ -1.52
TOPBP1-201ENST00000260810 UBXN4Q92575 508 aa5.53□□□□□ -1.52
TOPBP1-201ENST00000260810 PLD4Q96BZ4 506 aa5.53□□□□□ -1.52
TOPBP1-201ENST00000260810 CCT8L2Q96SF2 557 aa5.53□□□□□ -1.52
TOPBP1-201ENST00000260810 IQCGQ9H095 443 aaKnown RBP5.53□□□□□ -1.52
TOPBP1-201ENST00000260810 NT5MQ9NPB1 228 aa5.53□□□□□ -1.52
TOPBP1-201ENST00000260810 SLC2A4RGQ9NR83 387 aa5.53□□□□□ -1.52
TOPBP1-201ENST00000260810 GGA2Q9UJY4 613 aa5.53□□□□□ -1.52
TOPBP1-201ENST00000260810 RAI2Q9Y5P3 530 aa5.53□□□□□ -1.52
TOPBP1-201ENST00000260810 TCRBV5S2A0A599 114 aa5.53□□□□□ -1.52
TOPBP1-201ENST00000260810 ARHGEF33A8MVX0 844 aa5.53□□□□□ -1.52
TOPBP1-201ENST00000260810 PLRG1O43660 514 aaKnown RBP5.53□□□□□ -1.52
TOPBP1-201ENST00000260810 GMNNO75496 209 aa5.53□□□□□ -1.52
TOPBP1-201ENST00000260810 LATS1O95835 1130 aa5.53□□□□□ -1.52
TOPBP1-201ENST00000260810 BPGMP07738 259 aa5.53□□□□□ -1.52
TOPBP1-201ENST00000260810 GNAZP19086 355 aa5.53□□□□□ -1.52
TOPBP1-201ENST00000260810 WT1P19544 449 aaPredicted RBP5.53□□□□□ -1.52
TOPBP1-201ENST00000260810 ETFBP38117 255 aa5.53□□□□□ -1.52
TOPBP1-201ENST00000260810 SKIV2L2P42285 1042 aaKnown RBP5.53□□□□□ -1.52
TOPBP1-201ENST00000260810 ACADSBP45954 432 aa5.53□□□□□ -1.52
TOPBP1-201ENST00000260810 PDE1BQ01064 536 aa5.53□□□□□ -1.52
TOPBP1-201ENST00000260810 MGAT2Q10469 447 aa5.53□□□□□ -1.52
TOPBP1-201ENST00000260810 ILF2Q12905 390 aaKnown RBP5.53□□□□□ -1.52
TOPBP1-201ENST00000260810 RALGPS1Q5JS13 557 aa5.53□□□□□ -1.52
TOPBP1-201ENST00000260810 CFAP58Q5T655 872 aa5.53□□□□□ -1.52
TOPBP1-201ENST00000260810 MROH9Q5TGP6 573 aa5.53□□□□□ -1.52
TOPBP1-201ENST00000260810 KIAA0930Q6ICG6 404 aaPredicted RBP5.53□□□□□ -1.52
TOPBP1-201ENST00000260810 TBPL2Q6SJ96 375 aa5.53□□□□□ -1.52
TOPBP1-201ENST00000260810 RINLQ6ZS11 566 aa5.53□□□□□ -1.52
TOPBP1-201ENST00000260810 VN1R4Q7Z5H5 301 aa5.53□□□□□ -1.52
TOPBP1-201ENST00000260810 SIDT2Q8NBJ9 832 aaKnown RBP5.53□□□□□ -1.52
TOPBP1-201ENST00000260810 CREB3L4Q8TEY5 395 aa5.53□□□□□ -1.52
TOPBP1-201ENST00000260810 GAREM1Q9H706 876 aa5.53□□□□□ -1.52
TOPBP1-201ENST00000260810 ANKRA2Q9H9E1 313 aa5.53□□□□□ -1.52
TOPBP1-201ENST00000260810 DNAH6Q9C0G6 4158 aa5.53□□□□□ -1.52
TOPBP1-201ENST00000260810 MASP2O00187 686 aa5.52□□□□□ -1.53
TOPBP1-201ENST00000260810 APOL1O14791 398 aa5.52□□□□□ -1.53
TOPBP1-201ENST00000260810 P2RX6O15547 441 aa5.52□□□□□ -1.53
TOPBP1-201ENST00000260810 HRO43593 1189 aa5.52□□□□□ -1.53
TOPBP1-201ENST00000260810 S1PR1P21453 382 aa5.52□□□□□ -1.53
TOPBP1-201ENST00000260810 PXNP49023 591 aaPredicted RBP5.52□□□□□ -1.53
TOPBP1-201ENST00000260810 ZNF678Q5SXM1 525 aa5.52□□□□□ -1.53
TOPBP1-201ENST00000260810 LRIG3Q6UXM1 1119 aa5.52□□□□□ -1.53
TOPBP1-201ENST00000260810 SPATA2LQ8IUW3 424 aaPredicted RBP5.52□□□□□ -1.53
TOPBP1-201ENST00000260810 SRRM1Q8IYB3 904 aaKnown RBP5.52□□□□□ -1.53
TOPBP1-201ENST00000260810 CPNE9Q8IYJ1 553 aa5.52□□□□□ -1.53
TOPBP1-201ENST00000260810 BBOF1Q8ND07 529 aa5.52□□□□□ -1.53
TOPBP1-201ENST00000260810 AGAP11Q8TF27 550 aa5.52□□□□□ -1.53
TOPBP1-201ENST00000260810 ZNF483Q8TF39 744 aaPredicted RBP5.52□□□□□ -1.53
TOPBP1-201ENST00000260810 RUBCNQ92622 972 aa5.52□□□□□ -1.53
TOPBP1-201ENST00000260810 TIFAQ96CG3 184 aa5.52□□□□□ -1.53
TOPBP1-201ENST00000260810 ZG16BQ96DA0 208 aa5.52□□□□□ -1.53
TOPBP1-201ENST00000260810 VPS39Q96JC1 886 aa5.52□□□□□ -1.53
TOPBP1-201ENST00000260810 SLC39A3Q9BRY0 314 aa5.52□□□□□ -1.53
TOPBP1-201ENST00000260810 AARSD1Q9BTE6 412 aaKnown RBP5.52□□□□□ -1.53
TOPBP1-201ENST00000260810 MFSD1Q9H3U5 465 aa5.52□□□□□ -1.53
TOPBP1-201ENST00000260810 ATXN10Q9UBB4 475 aa5.52□□□□□ -1.53
TOPBP1-201ENST00000260810 NBEAL1Q6ZS30 2694 aa5.52□□□□□ -1.53
TOPBP1-201ENST00000260810 PLOD2O00469 737 aa5.52□□□□□ -1.53
TOPBP1-201ENST00000260810 KRT7P08729 469 aa5.52□□□□□ -1.53
TOPBP1-201ENST00000260810 MPSTP25325 297 aa5.52□□□□□ -1.53
TOPBP1-201ENST00000260810 HLTFQ14527 1009 aaKnown RBP eCLIP5.52□□□□□ -1.53
TOPBP1-201ENST00000260810 TAF1BQ53T94 588 aaPredicted RBP5.52□□□□□ -1.53
TOPBP1-201ENST00000260810 SH2D4BQ5SQS7 431 aa5.52□□□□□ -1.53
TOPBP1-201ENST00000260810 C10orf120Q5SQS8 335 aa5.52□□□□□ -1.53
TOPBP1-201ENST00000260810 NAGSQ8N159 534 aa5.52□□□□□ -1.53
TOPBP1-201ENST00000260810 DTX3LQ8TDB6 740 aa5.52□□□□□ -1.53
TOPBP1-201ENST00000260810 SMARCD2Q92925 531 aa5.52□□□□□ -1.53
TOPBP1-201ENST00000260810 USP7Q93009 1102 aa5.52□□□□□ -1.53
TOPBP1-201ENST00000260810 YME1L1Q96TA2 773 aa5.52□□□□□ -1.53
TOPBP1-201ENST00000260810 MACROD1Q9BQ69 325 aa5.52□□□□□ -1.53
TOPBP1-201ENST00000260810 ZNF649Q9BS31 505 aa5.52□□□□□ -1.53
TOPBP1-201ENST00000260810 SSU72Q9NP77 194 aaKnown RBP5.52□□□□□ -1.53
TOPBP1-201ENST00000260810 ARHGEF3Q9NR81 526 aa5.52□□□□□ -1.53
TOPBP1-201ENST00000260810 CES1P1Q9UKY3 287 aa5.52□□□□□ -1.53
TOPBP1-201ENST00000260810 OR1A2Q9Y585 309 aa5.52□□□□□ -1.53
TOPBP1-201ENST00000260810 A0A1W2PQ67 120 aa5.52□□□□□ -1.53
TOPBP1-201ENST00000260810 NEDD8-MDP1E9PL57 170 aa5.52□□□□□ -1.53
TOPBP1-201ENST00000260810 TMX2-CTNND1H3BSU7 103 aa5.52□□□□□ -1.53
TOPBP1-201ENST00000260810 PSMG1O95456 288 aa5.52□□□□□ -1.53
TOPBP1-201ENST00000260810 RB1P06400 928 aa5.52□□□□□ -1.53
TOPBP1-201ENST00000260810 PROS1P07225 676 aa5.52□□□□□ -1.53
TOPBP1-201ENST00000260810 IRF1P10914 325 aa5.52□□□□□ -1.53
TOPBP1-201ENST00000260810 STIP1P31948 543 aaKnown RBP5.52□□□□□ -1.53
TOPBP1-201ENST00000260810 PSMD8P48556 350 aa5.52□□□□□ -1.53
TOPBP1-201ENST00000260810 MAPKAPK2P49137 400 aa5.52□□□□□ -1.53
TOPBP1-201ENST00000260810 GAS1P54826 345 aa5.52□□□□□ -1.53
TOPBP1-201ENST00000260810 CLDN2P57739 230 aa5.52□□□□□ -1.53
TOPBP1-201ENST00000260810 SESN2P58004 480 aaPredicted RBP5.52□□□□□ -1.53
TOPBP1-201ENST00000260810 SARNPP82979 210 aaKnown RBP5.52□□□□□ -1.53
TOPBP1-201ENST00000260810 NEPROQ6NW34 567 aa5.52□□□□□ -1.53
TOPBP1-201ENST00000260810 EPGNQ6UW88 154 aa5.52□□□□□ -1.53
TOPBP1-201ENST00000260810 OLIG3Q7RTU3 272 aa5.52□□□□□ -1.53
TOPBP1-201ENST00000260810 TADA2BQ86TJ2 420 aa5.52□□□□□ -1.53
TOPBP1-201ENST00000260810 BBS5Q8N3I7 341 aa5.52□□□□□ -1.53
TOPBP1-201ENST00000260810 TBC1D31Q96DN5 1066 aa5.52□□□□□ -1.53
TOPBP1-201ENST00000260810 THOC1Q96FV9 657 aaKnown RBP5.52□□□□□ -1.53
TOPBP1-201ENST00000260810 RPGRIP1Q96KN7 1286 aa5.52□□□□□ -1.53
TOPBP1-201ENST00000260810 SERPINB11Q96P15 392 aa5.52□□□□□ -1.53
TOPBP1-201ENST00000260810 LENG8Q96PV6 779 aaPredicted RBP5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms