RNA–Protein interactions for RNA: ENST00000258962.4

SRSF1-201, Transcript of serine and arginine rich splicing factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-201ENST00000258962 C7P10643 843 aa17.24■□□□□ 0.35
SRSF1-201ENST00000258962 CD1DP15813 335 aa17.24■□□□□ 0.35
SRSF1-201ENST00000258962 GM2AP17900 193 aa17.24■□□□□ 0.35
SRSF1-201ENST00000258962 TFEBP19484 476 aa17.24■□□□□ 0.35
SRSF1-201ENST00000258962 GRK2P25098 689 aa17.24■□□□□ 0.35
SRSF1-201ENST00000258962 NFKBIAP25963 317 aa17.24■□□□□ 0.35
SRSF1-201ENST00000258962 PSMD8P48556 350 aa17.24■□□□□ 0.35
SRSF1-201ENST00000258962 DCDC1P59894 354 aa17.24■□□□□ 0.35
SRSF1-201ENST00000258962 SPEM2Q0P670 501 aa17.24■□□□□ 0.35
SRSF1-201ENST00000258962 ACAP2Q15057 778 aa17.24■□□□□ 0.35
SRSF1-201ENST00000258962 FAM46CQ5VWP2 391 aa17.24■□□□□ 0.35
SRSF1-201ENST00000258962 ARMCX6Q7L4S7 300 aa17.24■□□□□ 0.35
SRSF1-201ENST00000258962 CYP2U1Q7Z449 544 aa17.24■□□□□ 0.35
SRSF1-201ENST00000258962 ISCA2Q86U28 154 aa17.24■□□□□ 0.35
SRSF1-201ENST00000258962 RBFAQ8N0V3 343 aa17.24■□□□□ 0.35
SRSF1-201ENST00000258962 RFWD2Q8NHY2 731 aa17.24■□□□□ 0.35
SRSF1-201ENST00000258962 CD200R1Q8TD46 325 aa17.24■□□□□ 0.35
SRSF1-201ENST00000258962 KCNJ9Q92806 393 aa17.24■□□□□ 0.35
SRSF1-201ENST00000258962 FOXJ1Q92949 421 aa17.24■□□□□ 0.35
SRSF1-201ENST00000258962 GPR174Q9BXC1 333 aa17.24■□□□□ 0.35
SRSF1-201ENST00000258962 CD93Q9NPY3 652 aa17.24■□□□□ 0.35
SRSF1-201ENST00000258962 THAP1Q9NVV9 213 aa17.24■□□□□ 0.35
SRSF1-201ENST00000258962 FBXL12Q9NXK8 326 aa17.24■□□□□ 0.35
SRSF1-201ENST00000258962 NFKBIL1Q9UBC1 381 aaPredicted RBP17.24■□□□□ 0.35
SRSF1-201ENST00000258962 IQCF5A8MTL0 148 aa17.23■□□□□ 0.35
SRSF1-201ENST00000258962 H3BMM5 538 aa17.23■□□□□ 0.35
SRSF1-201ENST00000258962 PLK4O00444 970 aa17.23■□□□□ 0.35
SRSF1-201ENST00000258962 MID1O15344 667 aa17.23■□□□□ 0.35
SRSF1-201ENST00000258962 TRIM13O60858 407 aa17.23■□□□□ 0.35
SRSF1-201ENST00000258962 ZNF7P17097 686 aaPredicted RBP17.23■□□□□ 0.35
SRSF1-201ENST00000258962 C5AR1P21730 350 aa17.23■□□□□ 0.35
SRSF1-201ENST00000258962 PPARGP37231 505 aaPredicted RBP17.23■□□□□ 0.35
SRSF1-201ENST00000258962 SLC1A6P48664 564 aa17.23■□□□□ 0.35
SRSF1-201ENST00000258962 LIPMQ5VYY2 423 aa17.23■□□□□ 0.35
SRSF1-201ENST00000258962 LYSMD4Q5XG99 296 aa17.23■□□□□ 0.35
SRSF1-201ENST00000258962 ERAP2Q6P179 960 aa17.23■□□□□ 0.35
SRSF1-201ENST00000258962 KLC3Q6P597 504 aa17.23■□□□□ 0.35
SRSF1-201ENST00000258962 LIPIQ6XZB0 460 aa17.23■□□□□ 0.35
SRSF1-201ENST00000258962 Q6ZVL8 140 aa17.23■□□□□ 0.35
SRSF1-201ENST00000258962 USP30Q70CQ3 517 aa17.23■□□□□ 0.35
SRSF1-201ENST00000258962 TECPR1Q7Z6L1 1165 aa17.23■□□□□ 0.35
SRSF1-201ENST00000258962 SIDT2Q8NBJ9 832 aaKnown RBP17.23■□□□□ 0.35
SRSF1-201ENST00000258962 LKAAEAR1Q8TD35 194 aa17.23■□□□□ 0.35
SRSF1-201ENST00000258962 NAT14Q8WUY8 206 aa17.23■□□□□ 0.35
SRSF1-201ENST00000258962 SGF29Q96ES7 293 aa17.23■□□□□ 0.35
SRSF1-201ENST00000258962 SORT1Q99523 831 aa17.23■□□□□ 0.35
SRSF1-201ENST00000258962 GATA5Q9BWX5 397 aaPredicted RBP17.23■□□□□ 0.35
SRSF1-201ENST00000258962 CLPBQ9H078 707 aa17.23■□□□□ 0.35
SRSF1-201ENST00000258962 BTBD1Q9H0C5 482 aa17.23■□□□□ 0.35
SRSF1-201ENST00000258962 SYTL2Q9HCH5 934 aa17.23■□□□□ 0.35
SRSF1-201ENST00000258962 NEMP2A6NFY4 417 aa17.22■□□□□ 0.35
SRSF1-201ENST00000258962 C1QTNF3-AMACRE9PGA6 284 aa17.22■□□□□ 0.35
SRSF1-201ENST00000258962 AREL1O15033 823 aa17.22■□□□□ 0.35
SRSF1-201ENST00000258962 RNASEH2AO75792 299 aaKnown RBP17.22■□□□□ 0.35
SRSF1-201ENST00000258962 PYGLP06737 847 aa17.22■□□□□ 0.35
SRSF1-201ENST00000258962 RBP1P09455 135 aa17.22■□□□□ 0.35
SRSF1-201ENST00000258962 TROVE2P10155 538 aaKnown RBP eCLIP17.22■□□□□ 0.35
SRSF1-201ENST00000258962 MPLP40238 635 aa17.22■□□□□ 0.35
SRSF1-201ENST00000258962 ETV3P41162 512 aa17.22■□□□□ 0.35
SRSF1-201ENST00000258962 DPP6P42658 865 aa17.22■□□□□ 0.35
SRSF1-201ENST00000258962 KCNC1P48547 511 aa17.22■□□□□ 0.35
SRSF1-201ENST00000258962 CLCN7P51798 805 aa17.22■□□□□ 0.35
SRSF1-201ENST00000258962 ABCE1P61221 599 aaKnown RBP17.22■□□□□ 0.35
SRSF1-201ENST00000258962 IFT88Q13099 833 aa17.22■□□□□ 0.35
SRSF1-201ENST00000258962 CCDC121Q6ZUS5 278 aa17.22■□□□□ 0.35
SRSF1-201ENST00000258962 PIGKQ92643 395 aa17.22■□□□□ 0.35
SRSF1-201ENST00000258962 SCAMP4Q969E2 229 aa17.22■□□□□ 0.35
SRSF1-201ENST00000258962 RMDN2Q96LZ7 410 aa17.22■□□□□ 0.35
SRSF1-201ENST00000258962 HSPA12BQ96MM6 686 aa17.22■□□□□ 0.35
SRSF1-201ENST00000258962 TTC1Q99614 292 aa17.22■□□□□ 0.35
SRSF1-201ENST00000258962 ALG9Q9H6U8 611 aa17.22■□□□□ 0.35
SRSF1-201ENST00000258962 SGK2Q9HBY8 427 aa17.22■□□□□ 0.35
SRSF1-201ENST00000258962 SEMA4GQ9NTN9 838 aa17.22■□□□□ 0.35
SRSF1-201ENST00000258962 ZDHHC3Q9NYG2 299 aa17.22■□□□□ 0.35
SRSF1-201ENST00000258962 TRMT6Q9UJA5 497 aaKnown RBP17.22■□□□□ 0.35
SRSF1-201ENST00000258962 IKZF3Q9UKT9 509 aa17.22■□□□□ 0.35
SRSF1-201ENST00000258962 IGLV3-16A0A075B6K0 115 aa17.21■□□□□ 0.35
SRSF1-201ENST00000258962 A0A1W2PP55 124 aa17.21■□□□□ 0.35
SRSF1-201ENST00000258962 FOXD2O60548 495 aaPredicted RBP17.21■□□□□ 0.35
SRSF1-201ENST00000258962 H2AFYO75367 372 aaKnown RBP17.21■□□□□ 0.35
SRSF1-201ENST00000258962 TSPAN12O95859 305 aa17.21■□□□□ 0.35
SRSF1-201ENST00000258962 ADRB3P13945 408 aa17.21■□□□□ 0.35
SRSF1-201ENST00000258962 CHRM3P20309 590 aa17.21■□□□□ 0.35
SRSF1-201ENST00000258962 PRKAA2P54646 552 aa17.21■□□□□ 0.35
SRSF1-201ENST00000258962 B4GALNT1Q00973 533 aa17.21■□□□□ 0.35
SRSF1-201ENST00000258962 OR4D1Q15615 310 aa17.21■□□□□ 0.35
SRSF1-201ENST00000258962 CSRP2Q16527 193 aa17.21■□□□□ 0.35
SRSF1-201ENST00000258962 HENMT1Q5T8I9 393 aaKnown RBP17.21■□□□□ 0.35
SRSF1-201ENST00000258962 KIAA2013Q8IYS2 634 aa17.21■□□□□ 0.35
SRSF1-201ENST00000258962 RGL4Q8IZJ4 473 aa17.21■□□□□ 0.35
SRSF1-201ENST00000258962 HDDC3Q8N4P3 179 aa17.21■□□□□ 0.35
SRSF1-201ENST00000258962 CLDN19Q8N6F1 224 aa17.21■□□□□ 0.35
SRSF1-201ENST00000258962 CADM4Q8NFZ8 388 aa17.21■□□□□ 0.35
SRSF1-201ENST00000258962 ULK4Q96C45 1275 aa17.21■□□□□ 0.35
SRSF1-201ENST00000258962 MOCOSQ96EN8 888 aa17.21■□□□□ 0.35
SRSF1-201ENST00000258962 PPP1R16AQ96I34 528 aa17.21■□□□□ 0.35
SRSF1-201ENST00000258962 TRIM55Q9BYV6 548 aa17.21■□□□□ 0.35
SRSF1-201ENST00000258962 DERL2Q9GZP9 239 aa17.21■□□□□ 0.35
SRSF1-201ENST00000258962 FAM83DQ9H4H8 585 aa17.21■□□□□ 0.35
SRSF1-201ENST00000258962 KCNK13Q9HB14 408 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms