RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 USP17L5A8MUK1 530 aa6.68□□□□□ -1.34
PDGFRA-201ENST00000257290 VSTM5A8MXK1 200 aa6.68□□□□□ -1.34
PDGFRA-201ENST00000257290 PAK4O96013 591 aaPredicted RBP6.68□□□□□ -1.34
PDGFRA-201ENST00000257290 MLNP12872 115 aa6.68□□□□□ -1.34
PDGFRA-201ENST00000257290 PEPDP12955 493 aa6.68□□□□□ -1.34
PDGFRA-201ENST00000257290 KLRC1P26715 233 aa6.68□□□□□ -1.34
PDGFRA-201ENST00000257290 CERS1P27544 350 aa6.68□□□□□ -1.34
PDGFRA-201ENST00000257290 OPRL1P41146 370 aa6.68□□□□□ -1.34
PDGFRA-201ENST00000257290 PKNOX1P55347 436 aa6.68□□□□□ -1.34
PDGFRA-201ENST00000257290 TDGQ13569 410 aa6.68□□□□□ -1.34
PDGFRA-201ENST00000257290 PRKD1Q15139 912 aaPredicted RBP6.68□□□□□ -1.34
PDGFRA-201ENST00000257290 TUSC1Q2TAM9 212 aa6.68□□□□□ -1.34
PDGFRA-201ENST00000257290 TRABD2AQ86V40 505 aa6.68□□□□□ -1.34
PDGFRA-201ENST00000257290 C1orf54Q8WWF1 131 aa6.68□□□□□ -1.34
PDGFRA-201ENST00000257290 LARP4BQ92615 738 aaKnown RBP6.68□□□□□ -1.34
PDGFRA-201ENST00000257290 ZNF408Q9H9D4 720 aa6.68□□□□□ -1.34
PDGFRA-201ENST00000257290 RASSF1Q9NS23 344 aa6.68□□□□□ -1.34
PDGFRA-201ENST00000257290 ADAM28Q9UKQ2 775 aa6.68□□□□□ -1.34
PDGFRA-201ENST00000257290 PCDHGA6Q9Y5G7 932 aa6.68□□□□□ -1.34
PDGFRA-201ENST00000257290 E9PAM4 449 aa6.68□□□□□ -1.34
PDGFRA-201ENST00000257290 SLC22A5O76082 557 aa6.68□□□□□ -1.34
PDGFRA-201ENST00000257290 IL1BP01584 269 aa6.68□□□□□ -1.34
PDGFRA-201ENST00000257290 RLN2P04090 185 aa6.68□□□□□ -1.34
PDGFRA-201ENST00000257290 ZNF888P0CJ79 500 aaPredicted RBP6.68□□□□□ -1.34
PDGFRA-201ENST00000257290 PEX3P56589 373 aa6.68□□□□□ -1.34
PDGFRA-201ENST00000257290 ATP2C1P98194 919 aaPredicted RBP6.68□□□□□ -1.34
PDGFRA-201ENST00000257290 LIN54Q6MZP7 749 aa6.68□□□□□ -1.34
PDGFRA-201ENST00000257290 APOBEC3FQ8IUX4 373 aaKnown RBP6.68□□□□□ -1.34
PDGFRA-201ENST00000257290 MFSD2AQ8NA29 543 aa6.68□□□□□ -1.34
PDGFRA-201ENST00000257290 ZNF540Q8NDQ6 660 aa6.68□□□□□ -1.34
PDGFRA-201ENST00000257290 SCRN2Q96FV2 425 aa6.68□□□□□ -1.34
PDGFRA-201ENST00000257290 DIRAS2Q96HU8 199 aa6.68□□□□□ -1.34
PDGFRA-201ENST00000257290 ZNF341Q9BYN7 854 aa6.68□□□□□ -1.34
PDGFRA-201ENST00000257290 ADAM33Q9BZ11 813 aa6.68□□□□□ -1.34
PDGFRA-201ENST00000257290 WDR11Q9BZH6 1224 aa6.68□□□□□ -1.34
PDGFRA-201ENST00000257290 SNX15Q9NRS6 342 aa6.68□□□□□ -1.34
PDGFRA-201ENST00000257290 RIC8BQ9NVN3 520 aa6.68□□□□□ -1.34
PDGFRA-201ENST00000257290 PCDHB5Q9Y5E4 795 aa6.68□□□□□ -1.34
PDGFRA-201ENST00000257290 FAM237BA0A1B0GVD1 139 aa6.68□□□□□ -1.34
PDGFRA-201ENST00000257290 CIB4A0PJX0 185 aa6.68□□□□□ -1.34
PDGFRA-201ENST00000257290 LACTBL1A8MY62 500 aa6.68□□□□□ -1.34
PDGFRA-201ENST00000257290 EFCAB9A8MZ26 197 aa6.68□□□□□ -1.34
PDGFRA-201ENST00000257290 ADAMTS4O75173 837 aa6.68□□□□□ -1.34
PDGFRA-201ENST00000257290 BCAS1O75363 584 aaPredicted RBP6.68□□□□□ -1.34
PDGFRA-201ENST00000257290 SNAPINO95295 136 aa6.68□□□□□ -1.34
PDGFRA-201ENST00000257290 PGLSO95336 258 aa6.68□□□□□ -1.34
PDGFRA-201ENST00000257290 PRAMEF1O95521 474 aa6.68□□□□□ -1.34
PDGFRA-201ENST00000257290 CYP1A1P04798 512 aaPredicted RBP6.68□□□□□ -1.34
PDGFRA-201ENST00000257290 ODC1P11926 461 aa6.68□□□□□ -1.34
PDGFRA-201ENST00000257290 GZMAP12544 262 aa6.68□□□□□ -1.34
PDGFRA-201ENST00000257290 ITGB6P18564 788 aa6.68□□□□□ -1.34
PDGFRA-201ENST00000257290 PTPREP23469 700 aa6.68□□□□□ -1.34
PDGFRA-201ENST00000257290 ADRA1DP25100 572 aa6.68□□□□□ -1.34
PDGFRA-201ENST00000257290 MASP1P48740 699 aa6.68□□□□□ -1.34
PDGFRA-201ENST00000257290 HNRNPDQ14103 355 aaKnown RBP6.68□□□□□ -1.34
PDGFRA-201ENST00000257290 ADGRF1Q5T601 910 aa6.68□□□□□ -1.34
PDGFRA-201ENST00000257290 CYP2R1Q6VVX0 501 aa6.68□□□□□ -1.34
PDGFRA-201ENST00000257290 HIPK1Q86Z02 1210 aa6.68□□□□□ -1.34
PDGFRA-201ENST00000257290 TMEM199Q8N511 208 aa6.68□□□□□ -1.34
PDGFRA-201ENST00000257290 RNF148Q8N7C7 305 aa6.68□□□□□ -1.34
PDGFRA-201ENST00000257290 ZNF669Q96BR6 464 aaPredicted RBP6.68□□□□□ -1.34
PDGFRA-201ENST00000257290 VAT1Q99536 393 aa6.68□□□□□ -1.34
PDGFRA-201ENST00000257290 C3orf18Q9UK00 162 aa6.68□□□□□ -1.34
PDGFRA-201ENST00000257290 VPS28Q9UK41 221 aa6.68□□□□□ -1.34
PDGFRA-201ENST00000257290 RBM7Q9Y580 266 aaKnown RBP6.68□□□□□ -1.34
PDGFRA-201ENST00000257290 CACNG2Q9Y698 323 aa6.68□□□□□ -1.34
PDGFRA-201ENST00000257290 SETD1AO15047 1707 aaKnown RBP6.68□□□□□ -1.34
PDGFRA-201ENST00000257290 A0A096LPI6 279 aa6.68□□□□□ -1.34
PDGFRA-201ENST00000257290 POM121BA6NF01 834 aa6.68□□□□□ -1.34
PDGFRA-201ENST00000257290 SLCO1B7G3V0H7 640 aa6.68□□□□□ -1.34
PDGFRA-201ENST00000257290 H3BMQ9 156 aa6.68□□□□□ -1.34
PDGFRA-201ENST00000257290 PDCD5O14737 125 aa6.68□□□□□ -1.34
PDGFRA-201ENST00000257290 NKRFO15226 690 aaKnown RBP eCLIP6.68□□□□□ -1.34
PDGFRA-201ENST00000257290 ADAM11O75078 769 aa6.68□□□□□ -1.34
PDGFRA-201ENST00000257290 ENTPD3O75355 529 aa6.68□□□□□ -1.34
PDGFRA-201ENST00000257290 ERN1O75460 977 aaKnown RBP6.68□□□□□ -1.34
PDGFRA-201ENST00000257290 MAGEA3P43357 314 aa6.68□□□□□ -1.34
PDGFRA-201ENST00000257290 VSX2P58304 361 aaPredicted RBP6.68□□□□□ -1.34
PDGFRA-201ENST00000257290 TNK2Q07912 1038 aa6.68□□□□□ -1.34
PDGFRA-201ENST00000257290 BAK1Q16611 211 aa6.68□□□□□ -1.34
PDGFRA-201ENST00000257290 GPAT3Q53EU6 434 aa6.68□□□□□ -1.34
PDGFRA-201ENST00000257290 YIF1BQ5BJH7 314 aa6.68□□□□□ -1.34
PDGFRA-201ENST00000257290 CHSY3Q70JA7 882 aa6.68□□□□□ -1.34
PDGFRA-201ENST00000257290 TMEM139Q8IV31 216 aa6.68□□□□□ -1.34
PDGFRA-201ENST00000257290 UBQLNLQ8IYU4 475 aa6.68□□□□□ -1.34
PDGFRA-201ENST00000257290 PPM1KQ8N3J5 372 aa6.68□□□□□ -1.34
PDGFRA-201ENST00000257290 VCPIP1Q96JH7 1222 aa6.68□□□□□ -1.34
PDGFRA-201ENST00000257290 WDR77Q9BQA1 342 aaPredicted RBP6.68□□□□□ -1.34
PDGFRA-201ENST00000257290 RTKNQ9BST9 563 aa6.68□□□□□ -1.34
PDGFRA-201ENST00000257290 NIPAL2Q9H841 368 aa6.68□□□□□ -1.34
PDGFRA-201ENST00000257290 HSFX1Q9UBD0 423 aa6.68□□□□□ -1.34
PDGFRA-201ENST00000257290 PLAGL2Q9UPG8 496 aa6.68□□□□□ -1.34
PDGFRA-201ENST00000257290 POMPQ9Y244 141 aa6.68□□□□□ -1.34
PDGFRA-201ENST00000257290 TGOLN2O43493 480 aa6.68□□□□□ -1.34
PDGFRA-201ENST00000257290 CYTIPO60759 359 aa6.68□□□□□ -1.34
PDGFRA-201ENST00000257290 H2AFYO75367 372 aaKnown RBP6.68□□□□□ -1.34
PDGFRA-201ENST00000257290 FGF18O76093 207 aa6.68□□□□□ -1.34
PDGFRA-201ENST00000257290 RHOBTB3O94955 611 aa6.68□□□□□ -1.34
PDGFRA-201ENST00000257290 CLEC2LP0C7M8 214 aa6.68□□□□□ -1.34
PDGFRA-201ENST00000257290 PTNP21246 168 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms