RNA–Protein interactions for RNA: ENST00000251775.8

SNX4-201, Transcript of sorting nexin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX4, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-201ENST00000251775 TSC22D4Q9Y3Q8 395 aa18.73■□□□□ 0.59
SNX4-201ENST00000251775 H3BMM5 538 aa18.73■□□□□ 0.59
SNX4-201ENST00000251775 OXSR1O95747 527 aaPredicted RBP18.73■□□□□ 0.59
SNX4-201ENST00000251775 IGLV3-27P01718 113 aa18.73■□□□□ 0.59
SNX4-201ENST00000251775 FGF4P08620 206 aa18.73■□□□□ 0.59
SNX4-201ENST00000251775 HRH2P25021 359 aa18.73■□□□□ 0.59
SNX4-201ENST00000251775 EEF1DP29692 281 aaKnown RBP18.73■□□□□ 0.59
SNX4-201ENST00000251775 ACLYP53396 1101 aa18.73■□□□□ 0.59
SNX4-201ENST00000251775 ARSFP54793 590 aa18.73■□□□□ 0.59
SNX4-201ENST00000251775 FUT11Q495W5 492 aa18.73■□□□□ 0.59
SNX4-201ENST00000251775 NADSYN1Q6IA69 706 aa18.73■□□□□ 0.59
SNX4-201ENST00000251775 VPS33AQ96AX1 596 aa18.73■□□□□ 0.59
SNX4-201ENST00000251775 MAGED4Q96JG8 741 aa18.73■□□□□ 0.59
SNX4-201ENST00000251775 KCNA7Q96RP8 456 aa18.73■□□□□ 0.59
SNX4-201ENST00000251775 GPR62Q9BZJ7 368 aa18.73■□□□□ 0.59
SNX4-201ENST00000251775 ADNPQ9H2P0 1102 aa18.73■□□□□ 0.59
SNX4-201ENST00000251775 DNMT3BQ9UBC3 853 aaKnown RBP18.73■□□□□ 0.59
SNX4-201ENST00000251775 BRCA2P51587 3418 aa18.73■□□□□ 0.59
SNX4-201ENST00000251775 UPK1AO00322 258 aa18.72■□□□□ 0.59
SNX4-201ENST00000251775 SYN3O14994 580 aa18.72■□□□□ 0.59
SNX4-201ENST00000251775 HTR1AP08908 422 aa18.72■□□□□ 0.59
SNX4-201ENST00000251775 HGFP14210 728 aa18.72■□□□□ 0.59
SNX4-201ENST00000251775 IL7RP16871 459 aa18.72■□□□□ 0.59
SNX4-201ENST00000251775 OR1E1P30953 314 aa18.72■□□□□ 0.59
SNX4-201ENST00000251775 RAD23AP54725 363 aa18.72■□□□□ 0.59
SNX4-201ENST00000251775 MRPL58Q14197 206 aaKnown RBP18.72■□□□□ 0.59
SNX4-201ENST00000251775 PAGE3Q5JUK9 113 aa18.72■□□□□ 0.59
SNX4-201ENST00000251775 CRTC3Q6UUV7 619 aa18.72■□□□□ 0.59
SNX4-201ENST00000251775 PARP8Q8N3A8 854 aa18.72■□□□□ 0.59
SNX4-201ENST00000251775 BPIFB1Q8TDL5 484 aa18.72■□□□□ 0.59
SNX4-201ENST00000251775 PTERQ96BW5 349 aa18.72■□□□□ 0.59
SNX4-201ENST00000251775 TUBGCP3Q96CW5 907 aa18.72■□□□□ 0.59
SNX4-201ENST00000251775 TMEM74Q96NL1 305 aa18.72■□□□□ 0.59
SNX4-201ENST00000251775 MID1IP1Q9NPA3 183 aa18.72■□□□□ 0.59
SNX4-201ENST00000251775 AKIP1Q9NQ31 210 aa18.72■□□□□ 0.59
SNX4-201ENST00000251775 SACM1LQ9NTJ5 587 aa18.72■□□□□ 0.59
SNX4-201ENST00000251775 POLG2Q9UHN1 485 aa18.72■□□□□ 0.59
SNX4-201ENST00000251775 A0A1W2PP18 115 aa18.72■□□□□ 0.59
SNX4-201ENST00000251775 TCF3P15923 654 aa18.72■□□□□ 0.59
SNX4-201ENST00000251775 LBPP18428 481 aa18.72■□□□□ 0.59
SNX4-201ENST00000251775 ALDH3A2P51648 485 aa18.72■□□□□ 0.59
SNX4-201ENST00000251775 DIO3P55073 304 aa18.72■□□□□ 0.59
SNX4-201ENST00000251775 NFKB2Q00653 900 aa18.72■□□□□ 0.59
SNX4-201ENST00000251775 IFITM3Q01628 133 aa18.72■□□□□ 0.59
SNX4-201ENST00000251775 RPS6KA2Q15349 733 aa18.72■□□□□ 0.59
SNX4-201ENST00000251775 SKIV2LQ15477 1246 aaKnown RBP18.72■□□□□ 0.59
SNX4-201ENST00000251775 RBM48Q5RL73 367 aaKnown RBP18.72■□□□□ 0.59
SNX4-201ENST00000251775 KIAA2013Q8IYS2 634 aa18.72■□□□□ 0.59
SNX4-201ENST00000251775 EXT2Q93063 718 aa18.72■□□□□ 0.59
SNX4-201ENST00000251775 RNF145Q96MT1 663 aa18.72■□□□□ 0.59
SNX4-201ENST00000251775 TLR8Q9NR97 1041 aaKnown RBP18.72■□□□□ 0.59
SNX4-201ENST00000251775 WARS2Q9UGM6 360 aaKnown RBP18.72■□□□□ 0.59
SNX4-201ENST00000251775 ARL5AQ9Y689 179 aa18.72■□□□□ 0.59
SNX4-201ENST00000251775 LRRC14BA6NHZ5 514 aa18.71■□□□□ 0.59
SNX4-201ENST00000251775 AZIN1O14977 448 aa18.71■□□□□ 0.59
SNX4-201ENST00000251775 SIX3O95343 332 aaPredicted RBP18.71■□□□□ 0.59
SNX4-201ENST00000251775 VNN2O95498 520 aa18.71■□□□□ 0.59
SNX4-201ENST00000251775 SLC4A1P02730 911 aa18.71■□□□□ 0.59
SNX4-201ENST00000251775 ALPLP05186 524 aa18.71■□□□□ 0.59
SNX4-201ENST00000251775 UGT2B4P06133 528 aa18.71■□□□□ 0.59
SNX4-201ENST00000251775 HTR1BP28222 390 aa18.71■□□□□ 0.59
SNX4-201ENST00000251775 TM4SF4P48230 202 aa18.71■□□□□ 0.59
SNX4-201ENST00000251775 SEMA3AQ14563 771 aa18.71■□□□□ 0.59
SNX4-201ENST00000251775 GEN1Q17RS7 908 aa18.71■□□□□ 0.59
SNX4-201ENST00000251775 PARP15Q460N3 678 aa18.71■□□□□ 0.59
SNX4-201ENST00000251775 KANK2Q63ZY3 851 aa18.71■□□□□ 0.59
SNX4-201ENST00000251775 ZNF549Q6P9A3 640 aa18.71■□□□□ 0.59
SNX4-201ENST00000251775 RSPO2Q6UXX9 243 aaPredicted RBP18.71■□□□□ 0.59
SNX4-201ENST00000251775 THAP5Q7Z6K1 395 aa18.71■□□□□ 0.59
SNX4-201ENST00000251775 SNX29P2Q8IUI4 249 aa18.71■□□□□ 0.59
SNX4-201ENST00000251775 RIMKLAQ8IXN7 391 aa18.71■□□□□ 0.59
SNX4-201ENST00000251775 BLOC1S5Q8TDH9 187 aa18.71■□□□□ 0.59
SNX4-201ENST00000251775 TEX37Q96LM6 180 aa18.71■□□□□ 0.59
SNX4-201ENST00000251775 CCSER2Q9H7U1 834 aa18.71■□□□□ 0.59
SNX4-201ENST00000251775 RMI1Q9H9A7 625 aa18.71■□□□□ 0.59
SNX4-201ENST00000251775 HMG20AQ9NP66 347 aa18.71■□□□□ 0.59
SNX4-201ENST00000251775 OLA1Q9NTK5 396 aaKnown RBP18.71■□□□□ 0.59
SNX4-201ENST00000251775 POLR3BQ9NW08 1133 aaPredicted RBP18.71■□□□□ 0.59
SNX4-201ENST00000251775 SLAMF8Q9P0V8 285 aa18.71■□□□□ 0.59
SNX4-201ENST00000251775 MAGED1Q9Y5V3 778 aaPredicted RBP18.71■□□□□ 0.59
SNX4-201ENST00000251775 GPR45Q9Y5Y3 372 aa18.71■□□□□ 0.59
SNX4-201ENST00000251775 CCDC162PA2VCL2 907 aa18.71■□□□□ 0.59
SNX4-201ENST00000251775 KDM1AO60341 852 aa18.71■□□□□ 0.59
SNX4-201ENST00000251775 GOT2P00505 430 aaKnown RBP18.71■□□□□ 0.59
SNX4-201ENST00000251775 LINC00032P0C843 101 aa18.71■□□□□ 0.59
SNX4-201ENST00000251775 PIRTP0C851 137 aa18.71■□□□□ 0.59
SNX4-201ENST00000251775 CES1P23141 567 aa18.71■□□□□ 0.59
SNX4-201ENST00000251775 PBX3P40426 434 aa18.71■□□□□ 0.59
SNX4-201ENST00000251775 TIAL1Q01085 375 aaKnown RBP eCLIP18.71■□□□□ 0.59
SNX4-201ENST00000251775 OCA2Q04671 838 aa18.71■□□□□ 0.59
SNX4-201ENST00000251775 ACVR1Q04771 509 aa18.71■□□□□ 0.59
SNX4-201ENST00000251775 DAG1Q14118 895 aa18.71■□□□□ 0.59
SNX4-201ENST00000251775 GALNT3Q14435 633 aa18.71■□□□□ 0.59
SNX4-201ENST00000251775 PDZD8Q8NEN9 1154 aa18.71■□□□□ 0.59
SNX4-201ENST00000251775 CYP2S1Q96SQ9 504 aa18.71■□□□□ 0.59
SNX4-201ENST00000251775 SEPT5Q99719 369 aaPredicted RBP18.71■□□□□ 0.59
SNX4-201ENST00000251775 POLR1EQ9GZS1 481 aaKnown RBP18.71■□□□□ 0.59
SNX4-201ENST00000251775 BTRCQ9Y297 605 aa18.71■□□□□ 0.59
SNX4-201ENST00000251775 ACTL7AQ9Y615 435 aa18.71■□□□□ 0.59
SNX4-201ENST00000251775 CHD5Q8TDI0 1954 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms