RNA–Protein interactions for RNA: ENST00000248121.6

SYNGR3-201, Transcript of synaptogyrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNGR3, Length 2,051 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-201ENST00000248121 THTPAQ9BU02 230 aa23.04■■□□□ 1.28
SYNGR3-201ENST00000248121 COPG1Q9Y678 874 aaKnown RBP23.04■■□□□ 1.28
SYNGR3-201ENST00000248121 TM7SF2O76062 418 aa23.04■■□□□ 1.28
SYNGR3-201ENST00000248121 WASP42768 502 aa23.04■■□□□ 1.28
SYNGR3-201ENST00000248121 MNAT1P51948 309 aa23.04■■□□□ 1.28
SYNGR3-201ENST00000248121 PPP1R3AQ16821 1122 aa23.04■■□□□ 1.28
SYNGR3-201ENST00000248121 ATP13A5Q4VNC0 1218 aa23.04■■□□□ 1.28
SYNGR3-201ENST00000248121 LYPLAL1Q5VWZ2 237 aa23.04■■□□□ 1.28
SYNGR3-201ENST00000248121 SERPINA13PQ6UXR4 307 aa23.04■■□□□ 1.28
SYNGR3-201ENST00000248121 PARS2Q7L3T8 475 aaKnown RBP23.04■■□□□ 1.28
SYNGR3-201ENST00000248121 SUGP1Q8IWZ8 645 aaKnown RBP23.04■■□□□ 1.28
SYNGR3-201ENST00000248121 ACTRT2Q8TDY3 377 aa23.04■■□□□ 1.28
SYNGR3-201ENST00000248121 TRPC4APQ8TEL6 797 aa23.04■■□□□ 1.28
SYNGR3-201ENST00000248121 PLEKHG4BQ96PX9 1271 aa23.04■■□□□ 1.28
SYNGR3-201ENST00000248121 C1QTNF3Q9BXJ4 246 aa23.04■■□□□ 1.28
SYNGR3-201ENST00000248121 MID1IP1Q9NPA3 183 aa23.04■■□□□ 1.28
SYNGR3-201ENST00000248121 NKX1-2Q9UD57 310 aaPredicted RBP23.04■■□□□ 1.28
SYNGR3-201ENST00000248121 ITM2BQ9Y287 266 aa23.04■■□□□ 1.28
SYNGR3-201ENST00000248121 ASB1Q9Y576 335 aa23.04■■□□□ 1.28
SYNGR3-201ENST00000248121 F5P12259 2224 aa23.03■■□□□ 1.28
SYNGR3-201ENST00000248121 CKAP5Q14008 2032 aa23.03■■□□□ 1.28
SYNGR3-201ENST00000248121 STX16-NPEPL1H3BU86 382 aa23.03■■□□□ 1.28
SYNGR3-201ENST00000248121 STX16O14662 325 aa23.03■■□□□ 1.28
SYNGR3-201ENST00000248121 CHUKO15111 745 aa23.03■■□□□ 1.28
SYNGR3-201ENST00000248121 FGF4P08620 206 aa23.03■■□□□ 1.28
SYNGR3-201ENST00000248121 TIMP2P16035 220 aa23.03■■□□□ 1.28
SYNGR3-201ENST00000248121 CLCQ05315 142 aa23.03■■□□□ 1.28
SYNGR3-201ENST00000248121 KPNB1Q14974 876 aaKnown RBP23.03■■□□□ 1.28
SYNGR3-201ENST00000248121 MACC1Q6ZN28 852 aa23.03■■□□□ 1.28
SYNGR3-201ENST00000248121 CHSY3Q70JA7 882 aa23.03■■□□□ 1.28
SYNGR3-201ENST00000248121 ULK2Q8IYT8 1036 aa23.03■■□□□ 1.28
SYNGR3-201ENST00000248121 AFAP1L2Q8N4X5 818 aa23.03■■□□□ 1.28
SYNGR3-201ENST00000248121 PBXIP1Q96AQ6 731 aa23.03■■□□□ 1.28
SYNGR3-201ENST00000248121 ASB2Q96Q27 587 aa23.03■■□□□ 1.28
SYNGR3-201ENST00000248121 TTC1Q99614 292 aa23.03■■□□□ 1.28
SYNGR3-201ENST00000248121 ZBTB26Q9HCK0 441 aa23.03■■□□□ 1.28
SYNGR3-201ENST00000248121 DNAJC15Q9Y5T4 150 aa23.03■■□□□ 1.28
SYNGR3-201ENST00000248121 A0A088AWK7 358 aa23.02■■□□□ 1.28
SYNGR3-201ENST00000248121 MBTPS2O43462 519 aa23.02■■□□□ 1.28
SYNGR3-201ENST00000248121 SLC25A14O95258 325 aaPredicted RBP23.02■■□□□ 1.28
SYNGR3-201ENST00000248121 CCND1P24385 295 aa23.02■■□□□ 1.28
SYNGR3-201ENST00000248121 SPINT3P49223 89 aa23.02■■□□□ 1.28
SYNGR3-201ENST00000248121 GALK1P51570 392 aa23.02■■□□□ 1.28
SYNGR3-201ENST00000248121 B4GALNT1Q00973 533 aa23.02■■□□□ 1.28
SYNGR3-201ENST00000248121 BRAT1Q6PJG6 821 aa23.02■■□□□ 1.28
SYNGR3-201ENST00000248121 GPSM1Q86YR5 675 aa23.02■■□□□ 1.28
SYNGR3-201ENST00000248121 SCUBE1Q8IWY4 988 aa23.02■■□□□ 1.28
SYNGR3-201ENST00000248121 CLYBLQ8N0X4 340 aa23.02■■□□□ 1.28
SYNGR3-201ENST00000248121 C3orf30Q96M34 536 aa23.02■■□□□ 1.28
SYNGR3-201ENST00000248121 UBE2ZQ9H832 354 aaPredicted RBP23.02■■□□□ 1.28
SYNGR3-201ENST00000248121 PCDH12Q9NPG4 1184 aa23.02■■□□□ 1.28
SYNGR3-201ENST00000248121 THAP10Q9P2Z0 257 aaPredicted RBP23.02■■□□□ 1.28
SYNGR3-201ENST00000248121 TSR3Q9UJK0 312 aaKnown RBP23.02■■□□□ 1.28
SYNGR3-201ENST00000248121 TMPRSS11EQ9UL52 423 aa23.02■■□□□ 1.28
SYNGR3-201ENST00000248121 A0A1W2PQ67 120 aa23.02■■□□□ 1.28
SYNGR3-201ENST00000248121 TSPAN11A1L157 253 aa23.02■■□□□ 1.28
SYNGR3-201ENST00000248121 SLC22A2O15244 555 aa23.02■■□□□ 1.28
SYNGR3-201ENST00000248121 TRIM16O95361 564 aa23.02■■□□□ 1.28
SYNGR3-201ENST00000248121 ITGAXP20702 1163 aa23.02■■□□□ 1.28
SYNGR3-201ENST00000248121 EIF2DP41214 584 aaKnown RBP23.02■■□□□ 1.28
SYNGR3-201ENST00000248121 GRIA2P42262 883 aa23.02■■□□□ 1.28
SYNGR3-201ENST00000248121 SEC13P55735 322 aa23.02■■□□□ 1.28
SYNGR3-201ENST00000248121 TGFBIQ15582 683 aa23.02■■□□□ 1.28
SYNGR3-201ENST00000248121 KHDC1Q4VXA5 237 aaKnown RBP23.02■■□□□ 1.28
SYNGR3-201ENST00000248121 ZNF805Q5CZA5 627 aa23.02■■□□□ 1.28
SYNGR3-201ENST00000248121 SBSNQ6UWP8 590 aa23.02■■□□□ 1.28
SYNGR3-201ENST00000248121 ARHGAP24Q8N264 748 aa23.02■■□□□ 1.28
SYNGR3-201ENST00000248121 ESAMQ96AP7 390 aa23.02■■□□□ 1.28
SYNGR3-201ENST00000248121 KCNA7Q96RP8 456 aa23.02■■□□□ 1.28
SYNGR3-201ENST00000248121 FAM129BQ96TA1 746 aa23.02■■□□□ 1.28
SYNGR3-201ENST00000248121 ABCG8Q9H221 673 aa23.02■■□□□ 1.28
SYNGR3-201ENST00000248121 PLXNA2O75051 1894 aa23.01■■□□□ 1.27
SYNGR3-201ENST00000248121 EDDM13A0A1B0GTR0 161 aa23.01■■□□□ 1.27
SYNGR3-201ENST00000248121 C16orf96A6NNT2 1141 aa23.01■■□□□ 1.27
SYNGR3-201ENST00000248121 KPNA3O00505 521 aaPredicted RBP23.01■■□□□ 1.27
SYNGR3-201ENST00000248121 ADSLP30566 484 aaPredicted RBP23.01■■□□□ 1.27
SYNGR3-201ENST00000248121 POLR2LP62875 67 aaKnown RBP23.01■■□□□ 1.27
SYNGR3-201ENST00000248121 MLLT1Q03111 559 aaPredicted RBP23.01■■□□□ 1.27
SYNGR3-201ENST00000248121 ACSBG2Q5FVE4 666 aa23.01■■□□□ 1.27
SYNGR3-201ENST00000248121 GPRC6AQ5T6X5 926 aa23.01■■□□□ 1.27
SYNGR3-201ENST00000248121 ANKS6Q68DC2 871 aa23.01■■□□□ 1.27
SYNGR3-201ENST00000248121 SNX32Q86XE0 403 aa23.01■■□□□ 1.27
SYNGR3-201ENST00000248121 ZNF483Q8TF39 744 aaPredicted RBP23.01■■□□□ 1.27
SYNGR3-201ENST00000248121 ARRDC3Q96B67 414 aa23.01■■□□□ 1.27
SYNGR3-201ENST00000248121 SEMA4BQ9NPR2 832 aaPredicted RBP23.01■■□□□ 1.27
SYNGR3-201ENST00000248121 UTP6Q9NYH9 597 aaKnown RBP23.01■■□□□ 1.27
SYNGR3-201ENST00000248121 LIMD1Q9UGP4 676 aa23.01■■□□□ 1.27
SYNGR3-201ENST00000248121 SLC7A8Q9UHI5 535 aa23.01■■□□□ 1.27
SYNGR3-201ENST00000248121 CD84Q9UIB8 345 aa23.01■■□□□ 1.27
SYNGR3-201ENST00000248121 PCTPQ9UKL6 214 aa23.01■■□□□ 1.27
SYNGR3-201ENST00000248121 RGSL1A5PLK6 1076 aa23.01■■□□□ 1.27
SYNGR3-201ENST00000248121 UPK3BL1B0FP48 263 aa23.01■■□□□ 1.27
SYNGR3-201ENST00000248121 UPK3BL2E5RIL1 263 aa23.01■■□□□ 1.27
SYNGR3-201ENST00000248121 SPINT1O43278 529 aa23.01■■□□□ 1.27
SYNGR3-201ENST00000248121 APODP05090 189 aa23.01■■□□□ 1.27
SYNGR3-201ENST00000248121 ASGR2P07307 311 aa23.01■■□□□ 1.27
SYNGR3-201ENST00000248121 LCP2Q13094 533 aa23.01■■□□□ 1.27
SYNGR3-201ENST00000248121 CUL3Q13618 768 aa23.01■■□□□ 1.27
SYNGR3-201ENST00000248121 SKIV2LQ15477 1246 aaKnown RBP23.01■■□□□ 1.27
SYNGR3-201ENST00000248121 KANK2Q63ZY3 851 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms