RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 CELA2BP08218 269 aaPredicted RBP11.11□□□□□ -0.63
SF3B6-201ENST00000233468 ACP5P13686 325 aa11.11□□□□□ -0.63
SF3B6-201ENST00000233468 ATP1B2P14415 290 aaPredicted RBP11.11□□□□□ -0.63
SF3B6-201ENST00000233468 GLB1P16278 677 aa11.11□□□□□ -0.63
SF3B6-201ENST00000233468 ZNF7P17097 686 aaPredicted RBP11.11□□□□□ -0.63
SF3B6-201ENST00000233468 IDSP22304 550 aa11.11□□□□□ -0.63
SF3B6-201ENST00000233468 NSG1P42857 185 aa11.11□□□□□ -0.63
SF3B6-201ENST00000233468 ACADVLP49748 655 aa11.11□□□□□ -0.63
SF3B6-201ENST00000233468 TCEA2Q15560 299 aa11.11□□□□□ -0.63
SF3B6-201ENST00000233468 C14orf28Q4W4Y0 310 aa11.11□□□□□ -0.63
SF3B6-201ENST00000233468 RNASEH2BQ5TBB1 312 aaKnown RBP11.11□□□□□ -0.63
SF3B6-201ENST00000233468 MRNIPQ6NTE8 343 aa11.11□□□□□ -0.63
SF3B6-201ENST00000233468 TMEM220Q6QAJ8 160 aa11.11□□□□□ -0.63
SF3B6-201ENST00000233468 CRTC3Q6UUV7 619 aa11.11□□□□□ -0.63
SF3B6-201ENST00000233468 ZNF572Q7Z3I7 529 aaPredicted RBP11.11□□□□□ -0.63
SF3B6-201ENST00000233468 AMZ2Q86W34 360 aa11.11□□□□□ -0.63
SF3B6-201ENST00000233468 SERPINA9Q86WD7 417 aa11.11□□□□□ -0.63
SF3B6-201ENST00000233468 CCNJLQ8IV13 435 aa11.11□□□□□ -0.63
SF3B6-201ENST00000233468 PDIK1LQ8N165 341 aa11.11□□□□□ -0.63
SF3B6-201ENST00000233468 MPP5Q8N3R9 675 aa11.11□□□□□ -0.63
SF3B6-201ENST00000233468 OR13J1Q8NGT2 312 aa11.11□□□□□ -0.63
SF3B6-201ENST00000233468 SH3KBP1Q96B97 665 aa11.11□□□□□ -0.63
SF3B6-201ENST00000233468 TSSK1BQ9BXA7 367 aa11.11□□□□□ -0.63
SF3B6-201ENST00000233468 RAB17Q9H0T7 212 aa11.11□□□□□ -0.63
SF3B6-201ENST00000233468 CHRAC1Q9NRG0 131 aa11.11□□□□□ -0.63
SF3B6-201ENST00000233468 KLC4Q9NSK0 619 aa11.11□□□□□ -0.63
SF3B6-201ENST00000233468 SIRPGQ9P1W8 387 aa11.11□□□□□ -0.63
SF3B6-201ENST00000233468 COL5A1P20908 1838 aaPredicted RBP11.11□□□□□ -0.63
SF3B6-201ENST00000233468 SETXQ7Z333 2677 aaKnown RBP11.11□□□□□ -0.63
SF3B6-201ENST00000233468 ATMQ13315 3056 aa11.1□□□□□ -0.63
SF3B6-201ENST00000233468 KIR2DS5A0A0G2JLQ3 304 aa11.1□□□□□ -0.63
SF3B6-201ENST00000233468 A0A0G2JNG1 304 aa11.1□□□□□ -0.63
SF3B6-201ENST00000233468 FAM237BA0A1B0GVD1 139 aa11.1□□□□□ -0.63
SF3B6-201ENST00000233468 CCDC78A2IDD5 438 aa11.1□□□□□ -0.63
SF3B6-201ENST00000233468 CCDC162PA2VCL2 907 aa11.1□□□□□ -0.63
SF3B6-201ENST00000233468 GOLGA8MH3BSY2 632 aa11.1□□□□□ -0.63
SF3B6-201ENST00000233468 KIR2DS3K7RE56 304 aa11.1□□□□□ -0.63
SF3B6-201ENST00000233468 NUDT21O43809 227 aaKnown RBP11.1□□□□□ -0.63
SF3B6-201ENST00000233468 POP7O75817 140 aaKnown RBP11.1□□□□□ -0.63
SF3B6-201ENST00000233468 TMEM63AO94886 807 aa11.1□□□□□ -0.63
SF3B6-201ENST00000233468 TTC4O95801 387 aa11.1□□□□□ -0.63
SF3B6-201ENST00000233468 GOT2P00505 430 aaKnown RBP11.1□□□□□ -0.63
SF3B6-201ENST00000233468 POLBP06746 335 aa11.1□□□□□ -0.63
SF3B6-201ENST00000233468 PNLIPP16233 465 aa11.1□□□□□ -0.63
SF3B6-201ENST00000233468 AK4P27144 223 aaPredicted RBP11.1□□□□□ -0.63
SF3B6-201ENST00000233468 HALP42357 657 aa11.1□□□□□ -0.63
SF3B6-201ENST00000233468 TTPAP49638 278 aa11.1□□□□□ -0.63
SF3B6-201ENST00000233468 DNAJC3Q13217 504 aa11.1□□□□□ -0.63
SF3B6-201ENST00000233468 KIR2DS5Q14953 304 aa11.1□□□□□ -0.63
SF3B6-201ENST00000233468 BCL7AQ4VC05 210 aa11.1□□□□□ -0.63
SF3B6-201ENST00000233468 FNBP1LQ5T0N5 605 aa11.1□□□□□ -0.63
SF3B6-201ENST00000233468 ZNF648Q5T619 568 aaPredicted RBP11.1□□□□□ -0.63
SF3B6-201ENST00000233468 RNF187Q5TA31 235 aaPredicted RBP11.1□□□□□ -0.63
SF3B6-201ENST00000233468 ANKRD22Q5VYY1 191 aa11.1□□□□□ -0.63
SF3B6-201ENST00000233468 KCTD16Q68DU8 428 aa11.1□□□□□ -0.63
SF3B6-201ENST00000233468 BLOC1S3Q6QNY0 202 aa11.1□□□□□ -0.63
SF3B6-201ENST00000233468 ZNF534Q76KX8 674 aa11.1□□□□□ -0.63
SF3B6-201ENST00000233468 EFL1Q7Z2Z2 1120 aaKnown RBP11.1□□□□□ -0.63
SF3B6-201ENST00000233468 SLC9B2Q86UD5 537 aa11.1□□□□□ -0.63
SF3B6-201ENST00000233468 CAND1Q86VP6 1230 aaKnown RBP11.1□□□□□ -0.63
SF3B6-201ENST00000233468 TMPRSS12Q86WS5 348 aa11.1□□□□□ -0.63
SF3B6-201ENST00000233468 NRROSQ86YC3 692 aa11.1□□□□□ -0.63
SF3B6-201ENST00000233468 LMNTD2Q8IXW0 634 aa11.1□□□□□ -0.63
SF3B6-201ENST00000233468 SLC35F3Q8IY50 421 aa11.1□□□□□ -0.63
SF3B6-201ENST00000233468 OTUD6BQ8N6M0 293 aa11.1□□□□□ -0.63
SF3B6-201ENST00000233468 RASGEF1AQ8N9B8 481 aa11.1□□□□□ -0.63
SF3B6-201ENST00000233468 GPR156Q8NFN8 814 aa11.1□□□□□ -0.63
SF3B6-201ENST00000233468 CCL4L1Q8NHW4 92 aa11.1□□□□□ -0.63
SF3B6-201ENST00000233468 IFI44Q8TCB0 444 aa11.1□□□□□ -0.63
SF3B6-201ENST00000233468 MAPK15Q8TD08 544 aa11.1□□□□□ -0.63
SF3B6-201ENST00000233468 LINC00615Q96LM1 132 aaPredicted RBP11.1□□□□□ -0.63
SF3B6-201ENST00000233468 ERP44Q9BS26 406 aa11.1□□□□□ -0.63
SF3B6-201ENST00000233468 OSGEPL1Q9H4B0 414 aa11.1□□□□□ -0.63
SF3B6-201ENST00000233468 FAM96AQ9H5X1 160 aa11.1□□□□□ -0.63
SF3B6-201ENST00000233468 TREX1Q9NSU2 369 aa11.1□□□□□ -0.63
SF3B6-201ENST00000233468 CATSPERZQ9NTU4 200 aa11.1□□□□□ -0.63
SF3B6-201ENST00000233468 SYBUQ9NX95 663 aa11.1□□□□□ -0.63
SF3B6-201ENST00000233468 TMPRSS11EQ9UL52 423 aa11.1□□□□□ -0.63
SF3B6-201ENST00000233468 PRKAB1Q9Y478 270 aa11.1□□□□□ -0.63
SF3B6-201ENST00000233468 MAD1L1Q9Y6D9 718 aa11.1□□□□□ -0.63
SF3B6-201ENST00000233468 IGLV3-16A0A075B6K0 115 aa11.09□□□□□ -0.63
SF3B6-201ENST00000233468 C17orf113A0A1B0GUU1 675 aa11.09□□□□□ -0.63
SF3B6-201ENST00000233468 CTAGE15A4D2H0 777 aa11.09□□□□□ -0.63
SF3B6-201ENST00000233468 MGAT4DA6NG13 374 aa11.09□□□□□ -0.63
SF3B6-201ENST00000233468 OR2AG2A6NM03 316 aa11.09□□□□□ -0.63
SF3B6-201ENST00000233468 RHPN2P1A8MT19 583 aa11.09□□□□□ -0.63
SF3B6-201ENST00000233468 PDZK1P1A8MUH7 402 aa11.09□□□□□ -0.63
SF3B6-201ENST00000233468 CCL22O00626 93 aa11.09□□□□□ -0.63
SF3B6-201ENST00000233468 CD3EAPO15446 510 aaKnown RBP11.09□□□□□ -0.63
SF3B6-201ENST00000233468 SNX2O60749 519 aa11.09□□□□□ -0.63
SF3B6-201ENST00000233468 AVILO75366 819 aa11.09□□□□□ -0.63
SF3B6-201ENST00000233468 USP1O94782 785 aa11.09□□□□□ -0.63
SF3B6-201ENST00000233468 SEC31AO94979 1220 aaKnown RBP11.09□□□□□ -0.63
SF3B6-201ENST00000233468 FTH1P02794 183 aa11.09□□□□□ -0.63
SF3B6-201ENST00000233468 OR56A5P0C7T3 313 aa11.09□□□□□ -0.63
SF3B6-201ENST00000233468 CTAGE8P0CG41 777 aa11.09□□□□□ -0.63
SF3B6-201ENST00000233468 F3P13726 295 aa11.09□□□□□ -0.63
SF3B6-201ENST00000233468 PGAM1P18669 254 aa11.09□□□□□ -0.63
SF3B6-201ENST00000233468 FOXN2P32314 431 aa11.09□□□□□ -0.63
SF3B6-201ENST00000233468 GPR3P46089 330 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms