RNA–Protein interactions for RNA: ENST00000233242.5

APOB-201, Transcript of apolipoprotein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOB, Length 14,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-201ENST00000233242 AIFM2Q9BRQ8 373 aa8.14□□□□□ -1.11
APOB-201ENST00000233242 MID1O15344 667 aa8.13□□□□□ -1.11
APOB-201ENST00000233242 SNX4O95219 450 aa8.13□□□□□ -1.11
APOB-201ENST00000233242 LINGO3P0C6S8 592 aa8.13□□□□□ -1.11
APOB-201ENST00000233242 IFI30P13284 250 aa8.13□□□□□ -1.11
APOB-201ENST00000233242 TUFMP49411 452 aaKnown RBP8.13□□□□□ -1.11
APOB-201ENST00000233242 IFI44LQ53G44 452 aa8.13□□□□□ -1.11
APOB-201ENST00000233242 HDAC2Q92769 488 aaKnown RBP8.13□□□□□ -1.11
APOB-201ENST00000233242 C14orf105Q9NVL8 296 aa8.13□□□□□ -1.11
APOB-201ENST00000233242 DPP7Q9UHL4 492 aa8.13□□□□□ -1.11
APOB-201ENST00000233242 CNOT11Q9UKZ1 510 aaKnown RBP8.13□□□□□ -1.11
APOB-201ENST00000233242 DERAQ9Y315 318 aa8.13□□□□□ -1.11
APOB-201ENST00000233242 ARPC2O15144 300 aa8.13□□□□□ -1.11
APOB-201ENST00000233242 SLITRK5O94991 958 aa8.13□□□□□ -1.11
APOB-201ENST00000233242 CDH8P55286 799 aa8.13□□□□□ -1.11
APOB-201ENST00000233242 S100A12P80511 92 aa8.13□□□□□ -1.11
APOB-201ENST00000233242 MYBPC1Q00872 1141 aa8.13□□□□□ -1.11
APOB-201ENST00000233242 CHSY3Q70JA7 882 aa8.13□□□□□ -1.11
APOB-201ENST00000233242 MTFMTQ96DP5 389 aaKnown RBP8.13□□□□□ -1.11
APOB-201ENST00000233242 VMP1Q96GC9 406 aa8.13□□□□□ -1.11
APOB-201ENST00000233242 PPP1R16AQ96I34 528 aa8.13□□□□□ -1.11
APOB-201ENST00000233242 CPXM1Q96SM3 734 aa8.13□□□□□ -1.11
APOB-201ENST00000233242 PHOX2BQ99453 314 aa8.13□□□□□ -1.11
APOB-201ENST00000233242 CCSER2Q9H7U1 834 aa8.13□□□□□ -1.11
APOB-201ENST00000233242 TCAF1Q9Y4C2 921 aa8.13□□□□□ -1.11
APOB-201ENST00000233242 H0Y858 1186 aa8.13□□□□□ -1.11
APOB-201ENST00000233242 TOR1BO14657 336 aa8.13□□□□□ -1.11
APOB-201ENST00000233242 PROZP22891 400 aa8.13□□□□□ -1.11
APOB-201ENST00000233242 PTPN9P43378 593 aa8.13□□□□□ -1.11
APOB-201ENST00000233242 DCLRE1AQ6PJP8 1040 aa8.13□□□□□ -1.11
APOB-201ENST00000233242 RNF44Q7L0R7 432 aa8.13□□□□□ -1.11
APOB-201ENST00000233242 KCNS3Q9BQ31 491 aa8.13□□□□□ -1.11
APOB-201ENST00000233242 DPAGT1Q9H3H5 408 aa8.13□□□□□ -1.11
APOB-201ENST00000233242 MYOZ2Q9NPC6 264 aa8.13□□□□□ -1.11
APOB-201ENST00000233242 OXSMQ9NWU1 459 aa8.13□□□□□ -1.11
APOB-201ENST00000233242 RGS17Q9UGC6 210 aaPredicted RBP8.13□□□□□ -1.11
APOB-201ENST00000233242 ATF5Q9Y2D1 282 aaPredicted RBP8.13□□□□□ -1.11
APOB-201ENST00000233242 ENTPD6O75354 484 aa8.13□□□□□ -1.11
APOB-201ENST00000233242 CLDN9O95484 217 aa8.13□□□□□ -1.11
APOB-201ENST00000233242 NUDT14O95848 222 aa8.13□□□□□ -1.11
APOB-201ENST00000233242 ARCN1P48444 511 aaKnown RBP8.13□□□□□ -1.11
APOB-201ENST00000233242 SOX10P56693 466 aa8.13□□□□□ -1.11
APOB-201ENST00000233242 ERVK-8P63133 956 aa8.13□□□□□ -1.11
APOB-201ENST00000233242 CYP4F8P98187 520 aa8.13□□□□□ -1.11
APOB-201ENST00000233242 H3BNH8 94 aa8.13□□□□□ -1.11
APOB-201ENST00000233242 EPCAMP16422 314 aa8.13□□□□□ -1.11
APOB-201ENST00000233242 MRPS5P82675 430 aaKnown RBP8.13□□□□□ -1.11
APOB-201ENST00000233242 CAPN13Q6MZZ7 669 aaPredicted RBP8.13□□□□□ -1.11
APOB-201ENST00000233242 ANKRD26P1Q6NSI1 321 aa8.13□□□□□ -1.11
APOB-201ENST00000233242 PIGZQ86VD9 579 aa8.13□□□□□ -1.11
APOB-201ENST00000233242 COPS8Q99627 209 aa8.13□□□□□ -1.11
APOB-201ENST00000233242 MAF1Q9H063 256 aa8.13□□□□□ -1.11
APOB-201ENST00000233242 HSD3B7Q9H2F3 369 aa8.13□□□□□ -1.11
APOB-201ENST00000233242 TCRBV7S2A1N4TA0A589 114 aa8.13□□□□□ -1.11
APOB-201ENST00000233242 DNTTP04053 509 aa8.13□□□□□ -1.11
APOB-201ENST00000233242 HLA-DPB1P04440 258 aa8.13□□□□□ -1.11
APOB-201ENST00000233242 TNNI3P19429 210 aa8.13□□□□□ -1.11
APOB-201ENST00000233242 NDUFA9Q16795 377 aa8.13□□□□□ -1.11
APOB-201ENST00000233242 TOP6BLQ8N6T0 577 aa8.13□□□□□ -1.11
APOB-201ENST00000233242 NIPA2Q8N8Q9 360 aa8.13□□□□□ -1.11
APOB-201ENST00000233242 ZNF548Q8NEK5 533 aaPredicted RBP8.13□□□□□ -1.11
APOB-201ENST00000233242 CNDP2Q96KP4 475 aaKnown RBP8.13□□□□□ -1.11
APOB-201ENST00000233242 ENTPD1P49961 510 aa8.13□□□□□ -1.11
APOB-201ENST00000233242 SGCGQ13326 291 aa8.13□□□□□ -1.11
APOB-201ENST00000233242 ACO2Q99798 780 aaKnown RBP8.13□□□□□ -1.11
APOB-201ENST00000233242 PRORSD1PA6NEY8 169 aa8.13□□□□□ -1.11
APOB-201ENST00000233242 ZNF432O94892 652 aa8.13□□□□□ -1.11
APOB-201ENST00000233242 ADRA1BP35368 520 aa8.13□□□□□ -1.11
APOB-201ENST00000233242 MANFP55145 182 aaKnown RBP8.13□□□□□ -1.11
APOB-201ENST00000233242 TRUB1Q8WWH5 349 aaKnown RBP8.13□□□□□ -1.11
APOB-201ENST00000233242 AP2M1Q96CW1 435 aa8.13□□□□□ -1.11
APOB-201ENST00000233242 SCGB3A2Q96PL1 93 aa8.13□□□□□ -1.11
APOB-201ENST00000233242 ZNF639Q9UID6 485 aa8.13□□□□□ -1.11
APOB-201ENST00000233242 ZNF490Q9ULM2 529 aaPredicted RBP8.13□□□□□ -1.11
APOB-201ENST00000233242 LRATO95237 230 aa8.13□□□□□ -1.11
APOB-201ENST00000233242 URODP06132 367 aa8.13□□□□□ -1.11
APOB-201ENST00000233242 GSTM3P21266 225 aa8.13□□□□□ -1.11
APOB-201ENST00000233242 FUT2Q10981 343 aa8.13□□□□□ -1.11
APOB-201ENST00000233242 LARS2Q15031 903 aaKnown RBP8.13□□□□□ -1.11
APOB-201ENST00000233242 PAOXQ6QHF9 649 aa8.13□□□□□ -1.11
APOB-201ENST00000233242 EPGNQ6UW88 154 aa8.13□□□□□ -1.11
APOB-201ENST00000233242 ALDH16A1Q8IZ83 802 aa8.13□□□□□ -1.11
APOB-201ENST00000233242 SPATA6LQ8N4H0 392 aa8.13□□□□□ -1.11
APOB-201ENST00000233242 UROC1Q96N76 676 aa8.13□□□□□ -1.11
APOB-201ENST00000233242 DEFB129Q9H1M3 183 aa8.13□□□□□ -1.11
APOB-201ENST00000233242 POFUT2Q9Y2G5 429 aa8.13□□□□□ -1.11
APOB-201ENST00000233242 HERVK_113P63132 956 aa8.13□□□□□ -1.11
APOB-201ENST00000233242 PARP15Q460N3 678 aa8.13□□□□□ -1.11
APOB-201ENST00000233242 JAZF1Q86VZ6 243 aa8.13□□□□□ -1.11
APOB-201ENST00000233242 TSPEARQ8WU66 669 aa8.13□□□□□ -1.11
APOB-201ENST00000233242 FAM129BQ96TA1 746 aa8.13□□□□□ -1.11
APOB-201ENST00000233242 ERVK-6Q9BXR3 956 aa8.13□□□□□ -1.11
APOB-201ENST00000233242 POLR2J3Q9H1A7 115 aaKnown RBP8.13□□□□□ -1.11
APOB-201ENST00000233242 NOCTQ9UK39 431 aaKnown RBP8.13□□□□□ -1.11
APOB-201ENST00000233242 ENDOD1O94919 500 aa8.13□□□□□ -1.11
APOB-201ENST00000233242 COL6A1P12109 1028 aa8.13□□□□□ -1.11
APOB-201ENST00000233242 KLRK1P26718 216 aa8.13□□□□□ -1.11
APOB-201ENST00000233242 DET1Q7L5Y6 550 aa8.13□□□□□ -1.11
APOB-201ENST00000233242 TOMM5Q8N4H5 51 aa8.13□□□□□ -1.11
APOB-201ENST00000233242 GPR156Q8NFN8 814 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms