RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 SLC15A3Q8IY34 581 aa13.59□□□□□ -0.23
NFKB1-201ENST00000226574 KDM1BQ8NB78 822 aa13.59□□□□□ -0.23
NFKB1-201ENST00000226574 PHF10Q8WUB8 498 aaKnown RBP13.59□□□□□ -0.23
NFKB1-201ENST00000226574 CENPIQ92674 756 aaPredicted RBP13.59□□□□□ -0.23
NFKB1-201ENST00000226574 DMRTB1Q96MA1 342 aa13.59□□□□□ -0.23
NFKB1-201ENST00000226574 HDHD2Q9H0R4 259 aa13.59□□□□□ -0.23
NFKB1-201ENST00000226574 CTPS2Q9NRF8 586 aa13.59□□□□□ -0.23
NFKB1-201ENST00000226574 INTS7Q9NVH2 962 aaKnown RBP13.59□□□□□ -0.23
NFKB1-201ENST00000226574 CXCR6O00574 342 aa13.58□□□□□ -0.24
NFKB1-201ENST00000226574 MTX2O75431 263 aa13.58□□□□□ -0.24
NFKB1-201ENST00000226574 LRG1P02750 347 aa13.58□□□□□ -0.24
NFKB1-201ENST00000226574 TFAP2AP05549 437 aa13.58□□□□□ -0.24
NFKB1-201ENST00000226574 KIR3DL1P43629 444 aa13.58□□□□□ -0.24
NFKB1-201ENST00000226574 CCL23P55773 120 aa13.58□□□□□ -0.24
NFKB1-201ENST00000226574 ZNF280AP59817 542 aaPredicted RBP13.58□□□□□ -0.24
NFKB1-201ENST00000226574 OGFRL1Q5TC84 451 aaPredicted RBP13.58□□□□□ -0.24
NFKB1-201ENST00000226574 C7orf57Q8NEG2 295 aa13.58□□□□□ -0.24
NFKB1-201ENST00000226574 BRSK1Q8TDC3 778 aa13.58□□□□□ -0.24
NFKB1-201ENST00000226574 SLC13A3Q8WWT9 602 aa13.58□□□□□ -0.24
NFKB1-201ENST00000226574 NTAN1Q96AB6 310 aa13.58□□□□□ -0.24
NFKB1-201ENST00000226574 ATP6V1HQ9UI12 483 aa13.58□□□□□ -0.24
NFKB1-201ENST00000226574 SNX6Q9UNH7 406 aa13.58□□□□□ -0.24
NFKB1-201ENST00000226574 HS3ST4Q9Y661 456 aa13.58□□□□□ -0.24
NFKB1-201ENST00000226574 MYH14Q7Z406 1995 aaKnown RBP13.58□□□□□ -0.24
NFKB1-201ENST00000226574 KLHL33A6NCF5 533 aa13.58□□□□□ -0.24
NFKB1-201ENST00000226574 OR2AG2A6NM03 316 aa13.58□□□□□ -0.24
NFKB1-201ENST00000226574 FAM220BPB1ANY3 271 aa13.58□□□□□ -0.24
NFKB1-201ENST00000226574 CDK14O94921 469 aa13.58□□□□□ -0.24
NFKB1-201ENST00000226574 OPN1SWP03999 348 aa13.58□□□□□ -0.24
NFKB1-201ENST00000226574 PFKMP08237 780 aa13.58□□□□□ -0.24
NFKB1-201ENST00000226574 IMPDH2P12268 514 aa13.58□□□□□ -0.24
NFKB1-201ENST00000226574 TACR2P21452 398 aa13.58□□□□□ -0.24
NFKB1-201ENST00000226574 WARSP23381 471 aaKnown RBP13.58□□□□□ -0.24
NFKB1-201ENST00000226574 CNTN1Q12860 1018 aa13.58□□□□□ -0.24
NFKB1-201ENST00000226574 GTF2H2Q13888 395 aa13.58□□□□□ -0.24
NFKB1-201ENST00000226574 DAG1Q14118 895 aa13.58□□□□□ -0.24
NFKB1-201ENST00000226574 UAP1L1Q3KQV9 507 aa13.58□□□□□ -0.24
NFKB1-201ENST00000226574 GTF2H2CQ6P1K8 395 aa13.58□□□□□ -0.24
NFKB1-201ENST00000226574 CYP20A1Q6UW02 462 aa13.58□□□□□ -0.24
NFKB1-201ENST00000226574 UBE2R2Q712K3 238 aaPredicted RBP13.58□□□□□ -0.24
NFKB1-201ENST00000226574 GPR65Q8IYL9 337 aa13.58□□□□□ -0.24
NFKB1-201ENST00000226574 ENKURQ8TC29 256 aa13.58□□□□□ -0.24
NFKB1-201ENST00000226574 GTPBP3Q969Y2 492 aaKnown RBP13.58□□□□□ -0.24
NFKB1-201ENST00000226574 NSMCE3Q96MG7 304 aa13.58□□□□□ -0.24
NFKB1-201ENST00000226574 COPS8Q99627 209 aa13.58□□□□□ -0.24
NFKB1-201ENST00000226574 KIFC1Q9BW19 673 aa13.58□□□□□ -0.24
NFKB1-201ENST00000226574 LRRC3Q9BY71 257 aa13.58□□□□□ -0.24
NFKB1-201ENST00000226574 PCDHB8Q9UN66 801 aa13.58□□□□□ -0.24
NFKB1-201ENST00000226574 ZFP37Q9Y6Q3 630 aaPredicted RBP13.58□□□□□ -0.24
NFKB1-201ENST00000226574 NUP214P35658 2090 aaPredicted RBP13.58□□□□□ -0.24
NFKB1-201ENST00000226574 RP1L1Q8IWN7 2480 aaPredicted RBP13.58□□□□□ -0.24
NFKB1-201ENST00000226574 CROCCQ5TZA2 2017 aa13.58□□□□□ -0.24
NFKB1-201ENST00000226574 AQP12BA6NM10 295 aa13.58□□□□□ -0.24
NFKB1-201ENST00000226574 LSM1O15116 133 aaKnown RBP13.58□□□□□ -0.24
NFKB1-201ENST00000226574 RGS10O43665 173 aa13.58□□□□□ -0.24
NFKB1-201ENST00000226574 ALPIP09923 528 aa13.58□□□□□ -0.24
NFKB1-201ENST00000226574 RPIAP49247 311 aa13.58□□□□□ -0.24
NFKB1-201ENST00000226574 MYBPC1Q00872 1141 aa13.58□□□□□ -0.24
NFKB1-201ENST00000226574 MAP2K5Q13163 448 aa13.58□□□□□ -0.24
NFKB1-201ENST00000226574 R3HCC1LQ7Z5L2 792 aaKnown RBP13.58□□□□□ -0.24
NFKB1-201ENST00000226574 AQP12AQ8IXF9 295 aa13.58□□□□□ -0.24
NFKB1-201ENST00000226574 FAM9CQ8IZT9 166 aa13.58□□□□□ -0.24
NFKB1-201ENST00000226574 SLC34A3Q8N130 599 aa13.58□□□□□ -0.24
NFKB1-201ENST00000226574 FAM210AQ96ND0 272 aa13.58□□□□□ -0.24
NFKB1-201ENST00000226574 ZFYVE1Q9HBF4 777 aa13.58□□□□□ -0.24
NFKB1-201ENST00000226574 CLCA2Q9UQC9 943 aa13.58□□□□□ -0.24
NFKB1-201ENST00000226574 GIT1Q9Y2X7 761 aa13.58□□□□□ -0.24
NFKB1-201ENST00000226574 DYRK1BQ9Y463 629 aa13.58□□□□□ -0.24
NFKB1-201ENST00000226574 TIAM2Q8IVF5 1701 aa13.58□□□□□ -0.24
NFKB1-201ENST00000226574 PHRF1Q9P1Y6 1649 aaKnown RBP13.57□□□□□ -0.24
NFKB1-201ENST00000226574 XYLBO75191 536 aa13.57□□□□□ -0.24
NFKB1-201ENST00000226574 MLLT6P55198 1093 aaPredicted RBP13.57□□□□□ -0.24
NFKB1-201ENST00000226574 SRP54P61011 504 aaKnown RBP13.57□□□□□ -0.24
NFKB1-201ENST00000226574 CEP78Q5JTW2 689 aa13.57□□□□□ -0.24
NFKB1-201ENST00000226574 TXNDC11Q6PKC3 985 aa13.57□□□□□ -0.24
NFKB1-201ENST00000226574 KLHL17Q6TDP4 642 aa13.57□□□□□ -0.24
NFKB1-201ENST00000226574 BTN2A2Q8WVV5 523 aa13.57□□□□□ -0.24
NFKB1-201ENST00000226574 CGREF1Q99674 301 aa13.57□□□□□ -0.24
NFKB1-201ENST00000226574 RBM4BQ9BQ04 359 aaKnown RBP13.57□□□□□ -0.24
NFKB1-201ENST00000226574 ACBD6Q9BR61 282 aa13.57□□□□□ -0.24
NFKB1-201ENST00000226574 RBM4Q9BWF3 364 aaKnown RBP13.57□□□□□ -0.24
NFKB1-201ENST00000226574 NSUN3Q9H649 340 aaKnown RBP13.57□□□□□ -0.24
NFKB1-201ENST00000226574 LOC110117498-PIK3R3F6TDL0 507 aa13.57□□□□□ -0.24
NFKB1-201ENST00000226574 CCNKO75909 580 aa13.57□□□□□ -0.24
NFKB1-201ENST00000226574 CD68P34810 354 aaPredicted RBP13.57□□□□□ -0.24
NFKB1-201ENST00000226574 AFF1P51825 1210 aaKnown RBP13.57□□□□□ -0.24
NFKB1-201ENST00000226574 KPNA1P52294 538 aaPredicted RBP13.57□□□□□ -0.24
NFKB1-201ENST00000226574 CYP4F8P98187 520 aa13.57□□□□□ -0.24
NFKB1-201ENST00000226574 TP53BP2Q13625 1128 aa13.57□□□□□ -0.24
NFKB1-201ENST00000226574 SPANXN4Q5MJ08 99 aa13.57□□□□□ -0.24
NFKB1-201ENST00000226574 VN1R5Q7Z5H4 357 aa13.57□□□□□ -0.24
NFKB1-201ENST00000226574 ADGRG6Q86SQ4 1221 aa13.57□□□□□ -0.24
NFKB1-201ENST00000226574 GALNT10Q86SR1 603 aa13.57□□□□□ -0.24
NFKB1-201ENST00000226574 CILP2Q8IUL8 1156 aa13.57□□□□□ -0.24
NFKB1-201ENST00000226574 HM13Q8TCT9 377 aa13.57□□□□□ -0.24
NFKB1-201ENST00000226574 PTCD2Q8WV60 388 aaKnown RBP13.57□□□□□ -0.24
NFKB1-201ENST00000226574 C2orf49Q9BVC5 232 aaPredicted RBP13.57□□□□□ -0.24
NFKB1-201ENST00000226574 CRISPLD1Q9H336 500 aa13.57□□□□□ -0.24
NFKB1-201ENST00000226574 KLHL1Q9NR64 748 aa13.57□□□□□ -0.24
NFKB1-201ENST00000226574 MAGED1Q9Y5V3 778 aaPredicted RBP13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 91.4 ms