RNA–Protein interactions for RNA: ENST00000226225.6

TNFAIP1-201, Transcript of TNF alpha induced protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP1, Length 3,627 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP1-201ENST00000226225 FAM110BQ8TC76 370 aa11.59□□□□□ -0.55
TNFAIP1-201ENST00000226225 PTCD2Q8WV60 388 aaKnown RBP11.59□□□□□ -0.55
TNFAIP1-201ENST00000226225 KCTD4Q8WVF5 259 aa11.59□□□□□ -0.55
TNFAIP1-201ENST00000226225 NSMCE3Q96MG7 304 aa11.59□□□□□ -0.55
TNFAIP1-201ENST00000226225 WRAP53Q9BUR4 548 aaKnown RBP11.59□□□□□ -0.55
TNFAIP1-201ENST00000226225 YIPF2Q9BWQ6 316 aa11.59□□□□□ -0.55
TNFAIP1-201ENST00000226225 LIMD1Q9UGP4 676 aa11.59□□□□□ -0.55
TNFAIP1-201ENST00000226225 CDC14AQ9UNH5 594 aa11.59□□□□□ -0.55
TNFAIP1-201ENST00000226225 CEPT1Q9Y6K0 416 aa11.59□□□□□ -0.55
TNFAIP1-201ENST00000226225 C7orf72A4D263 438 aa11.59□□□□□ -0.55
TNFAIP1-201ENST00000226225 C9JVG2 144 aa11.59□□□□□ -0.55
TNFAIP1-201ENST00000226225 TK2O00142 265 aa11.59□□□□□ -0.55
TNFAIP1-201ENST00000226225 BIRC5O15392 142 aa11.59□□□□□ -0.55
TNFAIP1-201ENST00000226225 LDB2O43679 373 aa11.59□□□□□ -0.55
TNFAIP1-201ENST00000226225 PGLSO95336 258 aa11.59□□□□□ -0.55
TNFAIP1-201ENST00000226225 LAMP2P13473 410 aa11.59□□□□□ -0.55
TNFAIP1-201ENST00000226225 HNF1BP35680 557 aa11.59□□□□□ -0.55
TNFAIP1-201ENST00000226225 HADHAP40939 763 aa11.59□□□□□ -0.55
TNFAIP1-201ENST00000226225 DPP6P42658 865 aa11.59□□□□□ -0.55
TNFAIP1-201ENST00000226225 NAGLUP54802 743 aa11.59□□□□□ -0.55
TNFAIP1-201ENST00000226225 EMP3P54852 163 aa11.59□□□□□ -0.55
TNFAIP1-201ENST00000226225 TAS2R39P59534 338 aa11.59□□□□□ -0.55
TNFAIP1-201ENST00000226225 POLR2LP62875 67 aaKnown RBP11.59□□□□□ -0.55
TNFAIP1-201ENST00000226225 LSM12Q3MHD2 195 aaKnown RBP11.59□□□□□ -0.55
TNFAIP1-201ENST00000226225 GK5Q6ZS86 529 aa11.59□□□□□ -0.55
TNFAIP1-201ENST00000226225 PATL1Q86TB9 770 aaKnown RBP11.59□□□□□ -0.55
TNFAIP1-201ENST00000226225 MMAAQ8IVH4 418 aaKnown RBP11.59□□□□□ -0.55
TNFAIP1-201ENST00000226225 SFTPA1Q8IWL2 248 aa11.59□□□□□ -0.55
TNFAIP1-201ENST00000226225 ARL10Q8N8L6 244 aa11.59□□□□□ -0.55
TNFAIP1-201ENST00000226225 SLC39A3Q9BRY0 314 aa11.59□□□□□ -0.55
TNFAIP1-201ENST00000226225 CYP4F12Q9HCS2 524 aa11.59□□□□□ -0.55
TNFAIP1-201ENST00000226225 C6orf203Q9P0P8 240 aaPredicted RBP11.59□□□□□ -0.55
TNFAIP1-201ENST00000226225 XIRP2A4UGR9 3374 aa11.58□□□□□ -0.56
TNFAIP1-201ENST00000226225 ANTXRLA6NF34 631 aa11.58□□□□□ -0.56
TNFAIP1-201ENST00000226225 PLK4O00444 970 aa11.58□□□□□ -0.56
TNFAIP1-201ENST00000226225 AKAP10O43572 662 aa11.58□□□□□ -0.56
TNFAIP1-201ENST00000226225 SYNCRIPO60506 623 aaKnown RBP11.58□□□□□ -0.56
TNFAIP1-201ENST00000226225 ALDH1A2O94788 518 aa11.58□□□□□ -0.56
TNFAIP1-201ENST00000226225 PRLP01236 227 aa11.58□□□□□ -0.56
TNFAIP1-201ENST00000226225 PLK1P53350 603 aa11.58□□□□□ -0.56
TNFAIP1-201ENST00000226225 PDGFRLQ15198 375 aa11.58□□□□□ -0.56
TNFAIP1-201ENST00000226225 TAF1AQ15573 450 aaPredicted RBP11.58□□□□□ -0.56
TNFAIP1-201ENST00000226225 TMEM215Q68D42 235 aa11.58□□□□□ -0.56
TNFAIP1-201ENST00000226225 C16orf87Q6PH81 154 aa11.58□□□□□ -0.56
TNFAIP1-201ENST00000226225 VITQ6UXI7 678 aa11.58□□□□□ -0.56
TNFAIP1-201ENST00000226225 GDPD4Q6W3E5 623 aa11.58□□□□□ -0.56
TNFAIP1-201ENST00000226225 ADIPOR2Q86V24 386 aa11.58□□□□□ -0.56
TNFAIP1-201ENST00000226225 OR13J1Q8NGT2 312 aa11.58□□□□□ -0.56
TNFAIP1-201ENST00000226225 NXPE3Q969Y0 559 aa11.58□□□□□ -0.56
TNFAIP1-201ENST00000226225 CHFRQ96EP1 664 aa11.58□□□□□ -0.56
TNFAIP1-201ENST00000226225 SH3GLB1Q9Y371 365 aa11.58□□□□□ -0.56
TNFAIP1-201ENST00000226225 PRRT4C9JH25 899 aa11.58□□□□□ -0.56
TNFAIP1-201ENST00000226225 PDLIM1O00151 329 aa11.58□□□□□ -0.56
TNFAIP1-201ENST00000226225 TIPRLO75663 272 aa11.58□□□□□ -0.56
TNFAIP1-201ENST00000226225 PRAMEF1O95521 474 aa11.58□□□□□ -0.56
TNFAIP1-201ENST00000226225 CR2P20023 1033 aa11.58□□□□□ -0.56
TNFAIP1-201ENST00000226225 NR4A1P22736 598 aa11.58□□□□□ -0.56
TNFAIP1-201ENST00000226225 PFKPQ01813 784 aa11.58□□□□□ -0.56
TNFAIP1-201ENST00000226225 PTK2BQ14289 1009 aa11.58□□□□□ -0.56
TNFAIP1-201ENST00000226225 LDLRAP1Q5SW96 308 aa11.58□□□□□ -0.56
TNFAIP1-201ENST00000226225 LRRC8EQ6NSJ5 796 aa11.58□□□□□ -0.56
TNFAIP1-201ENST00000226225 DET1Q7L5Y6 550 aa11.58□□□□□ -0.56
TNFAIP1-201ENST00000226225 ZC3HC1Q86WB0 502 aaKnown RBP11.58□□□□□ -0.56
TNFAIP1-201ENST00000226225 STK40Q8N2I9 435 aa11.58□□□□□ -0.56
TNFAIP1-201ENST00000226225 SLC29A1Q99808 456 aa11.58□□□□□ -0.56
TNFAIP1-201ENST00000226225 PLA2G2FQ9BZM2 168 aa11.58□□□□□ -0.56
TNFAIP1-201ENST00000226225 ARNT2Q9HBZ2 717 aa11.58□□□□□ -0.56
TNFAIP1-201ENST00000226225 HACD3Q9P035 362 aa11.58□□□□□ -0.56
TNFAIP1-201ENST00000226225 ANKRD12Q6UB98 2062 aa11.58□□□□□ -0.56
TNFAIP1-201ENST00000226225 SLC7A4O43246 635 aa11.58□□□□□ -0.56
TNFAIP1-201ENST00000226225 KAT7O95251 611 aa11.58□□□□□ -0.56
TNFAIP1-201ENST00000226225 ITGALP20701 1170 aa11.58□□□□□ -0.56
TNFAIP1-201ENST00000226225 GJA4P35212 333 aa11.58□□□□□ -0.56
TNFAIP1-201ENST00000226225 YAP1P46937 504 aaKnown RBP11.58□□□□□ -0.56
TNFAIP1-201ENST00000226225 ACOX1Q15067 660 aa11.58□□□□□ -0.56
TNFAIP1-201ENST00000226225 GPR107Q5VW38 600 aa11.58□□□□□ -0.56
TNFAIP1-201ENST00000226225 TRIM8Q9BZR9 551 aa11.58□□□□□ -0.56
TNFAIP1-201ENST00000226225 CDH19Q9H159 772 aa11.58□□□□□ -0.56
TNFAIP1-201ENST00000226225 UTP6Q9NYH9 597 aaKnown RBP11.58□□□□□ -0.56
TNFAIP1-201ENST00000226225 DCDC2Q9UHG0 476 aa11.58□□□□□ -0.56
TNFAIP1-201ENST00000226225 PCDHGA4Q9Y5G9 962 aa11.58□□□□□ -0.56
TNFAIP1-201ENST00000226225 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.57□□□□□ -0.56
TNFAIP1-201ENST00000226225 LZTS3O60299 673 aaPredicted RBP11.57□□□□□ -0.56
TNFAIP1-201ENST00000226225 CD72P21854 359 aa11.57□□□□□ -0.56
TNFAIP1-201ENST00000226225 ME2P23368 584 aa11.57□□□□□ -0.56
TNFAIP1-201ENST00000226225 NEDD8Q15843 81 aa11.57□□□□□ -0.56
TNFAIP1-201ENST00000226225 AAK1Q2M2I8 961 aa11.57□□□□□ -0.56
TNFAIP1-201ENST00000226225 C16orf89Q6UX73 402 aa11.57□□□□□ -0.56
TNFAIP1-201ENST00000226225 PIM3Q86V86 326 aa11.57□□□□□ -0.56
TNFAIP1-201ENST00000226225 CLDN19Q8N6F1 224 aa11.57□□□□□ -0.56
TNFAIP1-201ENST00000226225 FLCNQ8NFG4 579 aa11.57□□□□□ -0.56
TNFAIP1-201ENST00000226225 RBM38Q9H0Z9 239 aaKnown RBP11.57□□□□□ -0.56
TNFAIP1-201ENST00000226225 CCDC167Q9P0B6 97 aa11.57□□□□□ -0.56
TNFAIP1-201ENST00000226225 VWA7Q9Y334 891 aa11.57□□□□□ -0.56
TNFAIP1-201ENST00000226225 RNF11Q9Y3C5 154 aa11.57□□□□□ -0.56
TNFAIP1-201ENST00000226225 NCF1BA6NI72 391 aaPredicted RBP11.57□□□□□ -0.56
TNFAIP1-201ENST00000226225 ZNF839A8K0R7 811 aa11.57□□□□□ -0.56
TNFAIP1-201ENST00000226225 NCF1CA8MVU1 366 aaPredicted RBP11.57□□□□□ -0.56
TNFAIP1-201ENST00000226225 DENRO43583 198 aaKnown RBP11.57□□□□□ -0.56
TNFAIP1-201ENST00000226225 PCDH8O95206 1070 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms