RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 Q6ZNX1 250 aa13.14□□□□□ -0.31
SRP54-201ENST00000216774 SLC24A5Q71RS6 500 aa13.14□□□□□ -0.31
SRP54-201ENST00000216774 FKBP9P1Q75LS8 142 aa13.14□□□□□ -0.31
SRP54-201ENST00000216774 SFRP1Q8N474 314 aa13.14□□□□□ -0.31
SRP54-201ENST00000216774 DTWD1Q8N5C7 304 aa13.14□□□□□ -0.31
SRP54-201ENST00000216774 PDPRQ8NCN5 879 aa13.14□□□□□ -0.31
SRP54-201ENST00000216774 OR52B6Q8NGF0 335 aa13.14□□□□□ -0.31
SRP54-201ENST00000216774 OR13F1Q8NGS4 319 aa13.14□□□□□ -0.31
SRP54-201ENST00000216774 PDLIM5Q96HC4 596 aaKnown RBP13.14□□□□□ -0.31
SRP54-201ENST00000216774 FAM210AQ96ND0 272 aa13.14□□□□□ -0.31
SRP54-201ENST00000216774 CGREF1Q99674 301 aa13.14□□□□□ -0.31
SRP54-201ENST00000216774 ADGRE3Q9BY15 652 aa13.14□□□□□ -0.31
SRP54-201ENST00000216774 CCSER2Q9H7U1 834 aa13.14□□□□□ -0.31
SRP54-201ENST00000216774 PRG3Q9Y2Y8 225 aaPredicted RBP13.14□□□□□ -0.31
SRP54-201ENST00000216774 ASB1Q9Y576 335 aa13.14□□□□□ -0.31
SRP54-201ENST00000216774 H0Y858 1186 aa13.13□□□□□ -0.31
SRP54-201ENST00000216774 H7C0S8 307 aa13.13□□□□□ -0.31
SRP54-201ENST00000216774 OR1I1O60431 355 aa13.13□□□□□ -0.31
SRP54-201ENST00000216774 ACSL4O60488 711 aa13.13□□□□□ -0.31
SRP54-201ENST00000216774 ALPLP05186 524 aa13.13□□□□□ -0.31
SRP54-201ENST00000216774 ASGR1P07306 291 aa13.13□□□□□ -0.31
SRP54-201ENST00000216774 ANXA6P08133 673 aa13.13□□□□□ -0.31
SRP54-201ENST00000216774 MBL2P11226 248 aaPredicted RBP13.13□□□□□ -0.31
SRP54-201ENST00000216774 GGT1P19440 569 aa13.13□□□□□ -0.31
SRP54-201ENST00000216774 JAK1P23458 1154 aa13.13□□□□□ -0.31
SRP54-201ENST00000216774 TMBIM6P55061 237 aa13.13□□□□□ -0.31
SRP54-201ENST00000216774 PWP1Q13610 501 aa13.13□□□□□ -0.31
SRP54-201ENST00000216774 TUBA3CQ13748 450 aa13.13□□□□□ -0.31
SRP54-201ENST00000216774 DAG1Q14118 895 aa13.13□□□□□ -0.31
SRP54-201ENST00000216774 PLCL1Q15111 1095 aa13.13□□□□□ -0.31
SRP54-201ENST00000216774 TRIM71Q2Q1W2 868 aaKnown RBP13.13□□□□□ -0.31
SRP54-201ENST00000216774 ZNF829Q3KNS6 432 aaPredicted RBP13.13□□□□□ -0.31
SRP54-201ENST00000216774 CYP20A1Q6UW02 462 aa13.13□□□□□ -0.31
SRP54-201ENST00000216774 TMEM26Q6ZUK4 368 aa13.13□□□□□ -0.31
SRP54-201ENST00000216774 FAM126BQ8IXS8 530 aa13.13□□□□□ -0.31
SRP54-201ENST00000216774 CPNE9Q8IYJ1 553 aa13.13□□□□□ -0.31
SRP54-201ENST00000216774 STK40Q8N2I9 435 aa13.13□□□□□ -0.31
SRP54-201ENST00000216774 SMYD1Q8NB12 490 aa13.13□□□□□ -0.31
SRP54-201ENST00000216774 ITFG1Q8TB96 612 aa13.13□□□□□ -0.31
SRP54-201ENST00000216774 METTL6Q8TCB7 284 aa13.13□□□□□ -0.31
SRP54-201ENST00000216774 BORCS5Q969J3 196 aa13.13□□□□□ -0.31
SRP54-201ENST00000216774 ABTB1Q969K4 478 aaPredicted RBP13.13□□□□□ -0.31
SRP54-201ENST00000216774 CDK5RAP1Q96SZ6 601 aaKnown RBP13.13□□□□□ -0.31
SRP54-201ENST00000216774 ZBED2Q9BTP6 218 aa13.13□□□□□ -0.31
SRP54-201ENST00000216774 TLR9Q9NR96 1032 aa13.13□□□□□ -0.31
SRP54-201ENST00000216774 TBC1D23Q9NUY8 699 aa13.13□□□□□ -0.31
SRP54-201ENST00000216774 FAIMQ9NVQ4 179 aa13.13□□□□□ -0.31
SRP54-201ENST00000216774 FKBPLQ9UIM3 349 aa13.13□□□□□ -0.31
SRP54-201ENST00000216774 AGO1Q9UL18 857 aaKnown RBP13.13□□□□□ -0.31
SRP54-201ENST00000216774 ACTL7AQ9Y615 435 aa13.13□□□□□ -0.31
SRP54-201ENST00000216774 E5RI56 91 aa13.13□□□□□ -0.31
SRP54-201ENST00000216774 H3BNC9 293 aa13.13□□□□□ -0.31
SRP54-201ENST00000216774 ANKRD28O15084 1053 aa13.13□□□□□ -0.31
SRP54-201ENST00000216774 LSM1O15116 133 aaKnown RBP13.13□□□□□ -0.31
SRP54-201ENST00000216774 ADAMTS4O75173 837 aa13.13□□□□□ -0.31
SRP54-201ENST00000216774 GMNNO75496 209 aa13.13□□□□□ -0.31
SRP54-201ENST00000216774 CAPN1P07384 714 aa13.13□□□□□ -0.31
SRP54-201ENST00000216774 SLC6A4P31645 630 aa13.13□□□□□ -0.31
SRP54-201ENST00000216774 SOX11P35716 441 aa13.13□□□□□ -0.31
SRP54-201ENST00000216774 KCNQ1P51787 676 aa13.13□□□□□ -0.31
SRP54-201ENST00000216774 CHRNB3Q05901 458 aa13.13□□□□□ -0.31
SRP54-201ENST00000216774 OTUD3Q5T2D3 398 aaPredicted RBP13.13□□□□□ -0.31
SRP54-201ENST00000216774 MFSD14CQ5VZR4 134 aa13.13□□□□□ -0.31
SRP54-201ENST00000216774 ZNF554Q86TJ5 538 aa13.13□□□□□ -0.31
SRP54-201ENST00000216774 RALGPS2Q86X27 583 aaPredicted RBP13.13□□□□□ -0.31
SRP54-201ENST00000216774 LPCAT1Q8NF37 534 aa13.13□□□□□ -0.31
SRP54-201ENST00000216774 TMBIM1Q969X1 311 aa13.13□□□□□ -0.31
SRP54-201ENST00000216774 ESAMQ96AP7 390 aa13.13□□□□□ -0.31
SRP54-201ENST00000216774 AURKBQ96GD4 344 aaPredicted RBP13.13□□□□□ -0.31
SRP54-201ENST00000216774 PPM1MQ96MI6 270 aa13.13□□□□□ -0.31
SRP54-201ENST00000216774 MUS81Q96NY9 551 aa13.13□□□□□ -0.31
SRP54-201ENST00000216774 SPON2Q9BUD6 331 aa13.13□□□□□ -0.31
SRP54-201ENST00000216774 ACTL8Q9H568 366 aa13.13□□□□□ -0.31
SRP54-201ENST00000216774 PIF1Q9H611 641 aa13.13□□□□□ -0.31
SRP54-201ENST00000216774 SOX17Q9H6I2 414 aaPredicted RBP13.13□□□□□ -0.31
SRP54-201ENST00000216774 GORASP2Q9H8Y8 452 aa13.13□□□□□ -0.31
SRP54-201ENST00000216774 V9GYQ6 96 aa13.13□□□□□ -0.31
SRP54-201ENST00000216774 A0A1W2PPW3 197 aa13.12□□□□□ -0.31
SRP54-201ENST00000216774 ANKRD66B4E2M5 251 aa13.12□□□□□ -0.31
SRP54-201ENST00000216774 STX7O15400 261 aaKnown RBP13.12□□□□□ -0.31
SRP54-201ENST00000216774 CLDN11O75508 207 aa13.12□□□□□ -0.31
SRP54-201ENST00000216774 SEC14L2O76054 403 aa13.12□□□□□ -0.31
SRP54-201ENST00000216774 THRBP10828 461 aa13.12□□□□□ -0.31
SRP54-201ENST00000216774 G6PDP11413 515 aa13.12□□□□□ -0.31
SRP54-201ENST00000216774 SLC11A2P49281 568 aa13.12□□□□□ -0.31
SRP54-201ENST00000216774 CLCN7P51798 805 aa13.12□□□□□ -0.31
SRP54-201ENST00000216774 EPS8Q12929 822 aa13.12□□□□□ -0.31
SRP54-201ENST00000216774 NEDD8Q15843 81 aa13.12□□□□□ -0.31
SRP54-201ENST00000216774 ZRANB3Q5FWF4 1079 aa13.12□□□□□ -0.31
SRP54-201ENST00000216774 FGD3Q5JSP0 725 aa13.12□□□□□ -0.31
SRP54-201ENST00000216774 RBM48Q5RL73 367 aaKnown RBP13.12□□□□□ -0.31
SRP54-201ENST00000216774 BROXQ5VW32 411 aa13.12□□□□□ -0.31
SRP54-201ENST00000216774 TMEM214Q6NUQ4 689 aaKnown RBP13.12□□□□□ -0.31
SRP54-201ENST00000216774 IL27RAQ6UWB1 636 aa13.12□□□□□ -0.31
SRP54-201ENST00000216774 ADAMTSL2Q86TH1 951 aa13.12□□□□□ -0.31
SRP54-201ENST00000216774 GALNT13Q8IUC8 556 aa13.12□□□□□ -0.31
SRP54-201ENST00000216774 TBC1D15Q8TC07 691 aa13.12□□□□□ -0.31
SRP54-201ENST00000216774 NRBF2Q96F24 287 aa13.12□□□□□ -0.31
SRP54-201ENST00000216774 EXOC2Q96KP1 924 aa13.12□□□□□ -0.31
SRP54-201ENST00000216774 FAM193BQ96PV7 902 aaPredicted RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms