RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 FRRS1Q6ZNA5 592 aa13.48□□□□□ -0.25
TGFBR3-201ENST00000212355 RDH11Q8TC12 318 aa13.48□□□□□ -0.25
TGFBR3-201ENST00000212355 TTPALQ9BTX7 342 aa13.48□□□□□ -0.25
TGFBR3-201ENST00000212355 COMMD3-BMI1R4GMX3 469 aa13.48□□□□□ -0.25
TGFBR3-201ENST00000212355 ALPIP09923 528 aa13.48□□□□□ -0.25
TGFBR3-201ENST00000212355 CHST4Q8NCG5 386 aa13.48□□□□□ -0.25
TGFBR3-201ENST00000212355 PPTC7Q8NI37 304 aa13.48□□□□□ -0.25
TGFBR3-201ENST00000212355 GAL3ST4Q96RP7 486 aa13.48□□□□□ -0.25
TGFBR3-201ENST00000212355 TRMT61BQ9BVS5 477 aaKnown RBP13.48□□□□□ -0.25
TGFBR3-201ENST00000212355 SLC39A8Q9C0K1 460 aa13.48□□□□□ -0.25
TGFBR3-201ENST00000212355 ARHGEF4Q9NR80 690 aa13.48□□□□□ -0.25
TGFBR3-201ENST00000212355 CCNDBP1O95273 360 aa13.47□□□□□ -0.25
TGFBR3-201ENST00000212355 LYNP07948 512 aa13.47□□□□□ -0.25
TGFBR3-201ENST00000212355 PKMP14618 531 aaKnown RBP13.47□□□□□ -0.25
TGFBR3-201ENST00000212355 RPL9P32969 192 aaKnown RBP13.47□□□□□ -0.25
TGFBR3-201ENST00000212355 ADAM17P78536 824 aa13.47□□□□□ -0.25
TGFBR3-201ENST00000212355 HKDC1Q2TB90 917 aa13.47□□□□□ -0.25
TGFBR3-201ENST00000212355 CLEC12AQ5QGZ9 265 aa13.47□□□□□ -0.25
TGFBR3-201ENST00000212355 TMPRSS9Q7Z410 1059 aa13.47□□□□□ -0.25
TGFBR3-201ENST00000212355 JAZF1Q86VZ6 243 aa13.47□□□□□ -0.25
TGFBR3-201ENST00000212355 FBXO15Q8NCQ5 510 aaPredicted RBP13.47□□□□□ -0.25
TGFBR3-201ENST00000212355 ZNF541Q9H0D2 1346 aa13.47□□□□□ -0.25
TGFBR3-201ENST00000212355 CCNKO75909 580 aa13.47□□□□□ -0.25
TGFBR3-201ENST00000212355 CABYRO75952 493 aa13.47□□□□□ -0.25
TGFBR3-201ENST00000212355 ACRP10323 421 aa13.47□□□□□ -0.25
TGFBR3-201ENST00000212355 CYP3A5P20815 502 aa13.47□□□□□ -0.25
TGFBR3-201ENST00000212355 PGGT1BP53609 377 aa13.47□□□□□ -0.25
TGFBR3-201ENST00000212355 BNIP1Q12981 228 aa13.47□□□□□ -0.25
TGFBR3-201ENST00000212355 LAPTM4AQ15012 233 aa13.47□□□□□ -0.25
TGFBR3-201ENST00000212355 CES5AQ6NT32 575 aa13.47□□□□□ -0.25
TGFBR3-201ENST00000212355 GPR153Q6NV75 609 aa13.47□□□□□ -0.25
TGFBR3-201ENST00000212355 DQX1Q8TE96 717 aaKnown RBP13.47□□□□□ -0.25
TGFBR3-201ENST00000212355 KBTBD7Q8WVZ9 684 aa13.47□□□□□ -0.25
TGFBR3-201ENST00000212355 EBF2Q9HAK2 575 aa13.47□□□□□ -0.25
TGFBR3-201ENST00000212355 ELOVL7A1L3X0 281 aa13.47□□□□□ -0.25
TGFBR3-201ENST00000212355 SERPINB7O75635 380 aa13.47□□□□□ -0.25
TGFBR3-201ENST00000212355 PGLSO95336 258 aa13.47□□□□□ -0.25
TGFBR3-201ENST00000212355 DRG2P55039 364 aaKnown RBP13.47□□□□□ -0.25
TGFBR3-201ENST00000212355 SP3Q02447 781 aa13.47□□□□□ -0.25
TGFBR3-201ENST00000212355 TNFAIP8L2Q6P589 184 aaPredicted RBP13.47□□□□□ -0.25
TGFBR3-201ENST00000212355 ADGRD1Q6QNK2 874 aa13.47□□□□□ -0.25
TGFBR3-201ENST00000212355 CRELD2Q6UXH1 353 aaPredicted RBP13.47□□□□□ -0.25
TGFBR3-201ENST00000212355 FSTL5Q8N475 847 aaPredicted RBP13.47□□□□□ -0.25
TGFBR3-201ENST00000212355 OR8D1Q8WZ84 308 aa13.47□□□□□ -0.25
TGFBR3-201ENST00000212355 TTTY10Q9BZA0 68 aa13.47□□□□□ -0.25
TGFBR3-201ENST00000212355 DNAJC28Q9NX36 388 aa13.47□□□□□ -0.25
TGFBR3-201ENST00000212355 STX16O14662 325 aa13.47□□□□□ -0.25
TGFBR3-201ENST00000212355 CDK14O94921 469 aa13.47□□□□□ -0.25
TGFBR3-201ENST00000212355 SIX3O95343 332 aaPredicted RBP13.47□□□□□ -0.25
TGFBR3-201ENST00000212355 GNPDA1P46926 289 aa13.47□□□□□ -0.25
TGFBR3-201ENST00000212355 MTTPP55157 894 aa13.47□□□□□ -0.25
TGFBR3-201ENST00000212355 RASSF6Q6ZTQ3 369 aa13.47□□□□□ -0.25
TGFBR3-201ENST00000212355 TBC1D21Q8IYX1 336 aa13.47□□□□□ -0.25
TGFBR3-201ENST00000212355 TOP6BLQ8N6T0 577 aa13.47□□□□□ -0.25
TGFBR3-201ENST00000212355 LRRC57Q8N9N7 239 aa13.47□□□□□ -0.25
TGFBR3-201ENST00000212355 MAML3Q96JK9 1138 aa13.47□□□□□ -0.25
TGFBR3-201ENST00000212355 PRPF19Q9UMS4 504 aaKnown RBP13.47□□□□□ -0.25
TGFBR3-201ENST00000212355 SORCS3Q9UPU3 1222 aa13.47□□□□□ -0.25
TGFBR3-201ENST00000212355 CCDC85CA6NKD9 419 aa13.47□□□□□ -0.25
TGFBR3-201ENST00000212355 HCN1O60741 890 aa13.47□□□□□ -0.25
TGFBR3-201ENST00000212355 ANGPTL1O95841 491 aa13.47□□□□□ -0.25
TGFBR3-201ENST00000212355 GBAP04062 536 aa13.47□□□□□ -0.25
TGFBR3-201ENST00000212355 THRBP10828 461 aa13.47□□□□□ -0.25
TGFBR3-201ENST00000212355 CXCR2P25025 360 aa13.47□□□□□ -0.25
TGFBR3-201ENST00000212355 CCNFP41002 786 aa13.47□□□□□ -0.25
TGFBR3-201ENST00000212355 ZNF135P52742 658 aaPredicted RBP13.47□□□□□ -0.25
TGFBR3-201ENST00000212355 ACLYP53396 1101 aa13.47□□□□□ -0.25
TGFBR3-201ENST00000212355 PURAQ00577 322 aaKnown RBP13.47□□□□□ -0.25
TGFBR3-201ENST00000212355 BMT2Q1RMZ1 405 aa13.47□□□□□ -0.25
TGFBR3-201ENST00000212355 PDE12Q6L8Q7 609 aaKnown RBP13.47□□□□□ -0.25
TGFBR3-201ENST00000212355 SMPDL3BQ92485 455 aa13.47□□□□□ -0.25
TGFBR3-201ENST00000212355 KIAA1522Q9P206 1035 aaPredicted RBP13.47□□□□□ -0.25
TGFBR3-201ENST00000212355 NKX1-2Q9UD57 310 aaPredicted RBP13.47□□□□□ -0.25
TGFBR3-201ENST00000212355 PGRMC2O15173 223 aa13.46□□□□□ -0.25
TGFBR3-201ENST00000212355 SLC31A1O15431 190 aa13.46□□□□□ -0.25
TGFBR3-201ENST00000212355 OPN1SWP03999 348 aa13.46□□□□□ -0.25
TGFBR3-201ENST00000212355 UAP1L1Q3KQV9 507 aa13.46□□□□□ -0.25
TGFBR3-201ENST00000212355 MINDY4Q4G0A6 757 aa13.46□□□□□ -0.25
TGFBR3-201ENST00000212355 ZNF554Q86TJ5 538 aa13.46□□□□□ -0.25
TGFBR3-201ENST00000212355 MON1AQ86VX9 555 aa13.46□□□□□ -0.25
TGFBR3-201ENST00000212355 C17orf64Q86WR6 236 aa13.46□□□□□ -0.25
TGFBR3-201ENST00000212355 TMEM203Q969S6 136 aa13.46□□□□□ -0.25
TGFBR3-201ENST00000212355 FRMD6Q96NE9 622 aa13.46□□□□□ -0.25
TGFBR3-201ENST00000212355 HIPK3Q9H422 1215 aa13.46□□□□□ -0.25
TGFBR3-201ENST00000212355 GTF2IRD1Q9UHL9 959 aa13.46□□□□□ -0.25
TGFBR3-201ENST00000212355 TCAF1Q9Y4C2 921 aa13.46□□□□□ -0.25
TGFBR3-201ENST00000212355 LRRC72A6NJI9 287 aa13.46□□□□□ -0.25
TGFBR3-201ENST00000212355 DIRAS1O95057 198 aa13.46□□□□□ -0.25
TGFBR3-201ENST00000212355 ATP13A5Q4VNC0 1218 aa13.46□□□□□ -0.25
TGFBR3-201ENST00000212355 GCNT6Q5T4J0 391 aa13.46□□□□□ -0.25
TGFBR3-201ENST00000212355 ANXA8L1Q5VT79 327 aa13.46□□□□□ -0.25
TGFBR3-201ENST00000212355 LCLAT1Q6UWP7 414 aa13.46□□□□□ -0.25
TGFBR3-201ENST00000212355 ADAMTS15Q8TE58 950 aa13.46□□□□□ -0.25
TGFBR3-201ENST00000212355 AP2M1Q96CW1 435 aa13.46□□□□□ -0.25
TGFBR3-201ENST00000212355 FZD10Q9ULW2 581 aa13.46□□□□□ -0.25
TGFBR3-201ENST00000212355 TULP2O00295 520 aa13.46□□□□□ -0.25
TGFBR3-201ENST00000212355 LDB2O43679 373 aa13.46□□□□□ -0.25
TGFBR3-201ENST00000212355 MGRN1O60291 552 aa13.46□□□□□ -0.25
TGFBR3-201ENST00000212355 SNX4O95219 450 aa13.46□□□□□ -0.25
TGFBR3-201ENST00000212355 CLDN9O95484 217 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms