RNA–Protein interactions for RNA: ENST00000054666.10

VAMP3-201, Transcript of vesicle associated membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP3, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-201ENST00000054666 MRPL19P49406 292 aaKnown RBP8.15□□□□□ -1.1
VAMP3-201ENST00000054666 CCNHP51946 323 aaPredicted RBP8.15□□□□□ -1.1
VAMP3-201ENST00000054666 GTF2H2Q13888 395 aa8.15□□□□□ -1.1
VAMP3-201ENST00000054666 FUT11Q495W5 492 aa8.15□□□□□ -1.1
VAMP3-201ENST00000054666 VPS26BQ4G0F5 336 aa8.15□□□□□ -1.1
VAMP3-201ENST00000054666 PDCD4Q53EL6 469 aaKnown RBP8.15□□□□□ -1.1
VAMP3-201ENST00000054666 GTF2H2CQ6P1K8 395 aa8.15□□□□□ -1.1
VAMP3-201ENST00000054666 GOLGA7Q7Z5G4 137 aa8.15□□□□□ -1.1
VAMP3-201ENST00000054666 TSPAN33Q86UF1 283 aa8.15□□□□□ -1.1
VAMP3-201ENST00000054666 HOMEZQ8IX15 550 aa8.15□□□□□ -1.1
VAMP3-201ENST00000054666 ADCY4Q8NFM4 1077 aa8.15□□□□□ -1.1
VAMP3-201ENST00000054666 METTL6Q8TCB7 284 aa8.15□□□□□ -1.1
VAMP3-201ENST00000054666 LKAAEAR1Q8TD35 194 aa8.15□□□□□ -1.1
VAMP3-201ENST00000054666 ESAMQ96AP7 390 aa8.15□□□□□ -1.1
VAMP3-201ENST00000054666 ULK4Q96C45 1275 aa8.15□□□□□ -1.1
VAMP3-201ENST00000054666 DCUN1D1Q96GG9 259 aa8.15□□□□□ -1.1
VAMP3-201ENST00000054666 KLHL32Q96NJ5 620 aa8.15□□□□□ -1.1
VAMP3-201ENST00000054666 PLEKHG4BQ96PX9 1271 aa8.15□□□□□ -1.1
VAMP3-201ENST00000054666 C17orf80Q9BSJ5 609 aa8.15□□□□□ -1.1
VAMP3-201ENST00000054666 BBS2Q9BXC9 721 aa8.15□□□□□ -1.1
VAMP3-201ENST00000054666 SUV39H2Q9H5I1 410 aa8.15□□□□□ -1.1
VAMP3-201ENST00000054666 KCTD5Q9NXV2 234 aa8.15□□□□□ -1.1
VAMP3-201ENST00000054666 PDP2Q9P2J9 529 aa8.15□□□□□ -1.1
VAMP3-201ENST00000054666 RIMS3Q9UJD0 308 aa8.15□□□□□ -1.1
VAMP3-201ENST00000054666 INSL6Q9Y581 213 aa8.15□□□□□ -1.1
VAMP3-201ENST00000054666 PTPRSQ13332 1948 aa8.14□□□□□ -1.11
VAMP3-201ENST00000054666 PRSS51A0A1B0GVH4 220 aa8.14□□□□□ -1.11
VAMP3-201ENST00000054666 PRORSD1PA6NEY8 169 aa8.14□□□□□ -1.11
VAMP3-201ENST00000054666 A8MX80 341 aa8.14□□□□□ -1.11
VAMP3-201ENST00000054666 ZNF821O75541 412 aaPredicted RBP8.14□□□□□ -1.11
VAMP3-201ENST00000054666 POP4O95707 220 aaKnown RBP8.14□□□□□ -1.11
VAMP3-201ENST00000054666 GUCA1CO95843 209 aa8.14□□□□□ -1.11
VAMP3-201ENST00000054666 UGT2B4P06133 528 aa8.14□□□□□ -1.11
VAMP3-201ENST00000054666 CHRM1P11229 460 aaPredicted RBP8.14□□□□□ -1.11
VAMP3-201ENST00000054666 PABPC1P11940 636 aaKnown RBP8.14□□□□□ -1.11
VAMP3-201ENST00000054666 UGT1A6P19224 532 aa8.14□□□□□ -1.11
VAMP3-201ENST00000054666 CAPN3P20807 821 aa8.14□□□□□ -1.11
VAMP3-201ENST00000054666 UGT1A1P22309 533 aa8.14□□□□□ -1.11
VAMP3-201ENST00000054666 UGT1A4P22310 534 aa8.14□□□□□ -1.11
VAMP3-201ENST00000054666 CTNNB1P35222 781 aa8.14□□□□□ -1.11
VAMP3-201ENST00000054666 UGT1A3P35503 534 aa8.14□□□□□ -1.11
VAMP3-201ENST00000054666 UGT1A5P35504 534 aa8.14□□□□□ -1.11
VAMP3-201ENST00000054666 HSPA13P48723 471 aa8.14□□□□□ -1.11
VAMP3-201ENST00000054666 DIO3P55073 304 aa8.14□□□□□ -1.11
VAMP3-201ENST00000054666 HTRA4P83105 476 aaPredicted RBP8.14□□□□□ -1.11
VAMP3-201ENST00000054666 BNIP2Q12982 314 aa8.14□□□□□ -1.11
VAMP3-201ENST00000054666 NFYCQ13952 458 aa8.14□□□□□ -1.11
VAMP3-201ENST00000054666 ARHGEF7Q14155 803 aa8.14□□□□□ -1.11
VAMP3-201ENST00000054666 NR6A1Q15406 480 aa8.14□□□□□ -1.11
VAMP3-201ENST00000054666 CDKN3Q16667 212 aa8.14□□□□□ -1.11
VAMP3-201ENST00000054666 CARD16Q5EG05 197 aa8.14□□□□□ -1.11
VAMP3-201ENST00000054666 SULT1C3Q6IMI6 304 aa8.14□□□□□ -1.11
VAMP3-201ENST00000054666 C8orf82Q6P1X6 216 aaPredicted RBP8.14□□□□□ -1.11
VAMP3-201ENST00000054666 ELMSAN1Q6PJG2 1045 aa8.14□□□□□ -1.11
VAMP3-201ENST00000054666 CRTC1Q6UUV9 634 aa8.14□□□□□ -1.11
VAMP3-201ENST00000054666 IL27RAQ6UWB1 636 aa8.14□□□□□ -1.11
VAMP3-201ENST00000054666 NECAB2Q7Z6G3 386 aa8.14□□□□□ -1.11
VAMP3-201ENST00000054666 DHFR2Q86XF0 187 aa8.14□□□□□ -1.11
VAMP3-201ENST00000054666 ZSWIM9Q86XI8 627 aa8.14□□□□□ -1.11
VAMP3-201ENST00000054666 CLDN19Q8N6F1 224 aa8.14□□□□□ -1.11
VAMP3-201ENST00000054666 DCBLD1Q8N8Z6 715 aa8.14□□□□□ -1.11
VAMP3-201ENST00000054666 OR52B6Q8NGF0 335 aa8.14□□□□□ -1.11
VAMP3-201ENST00000054666 PIP4K2CQ8TBX8 421 aa8.14□□□□□ -1.11
VAMP3-201ENST00000054666 GATA6Q92908 595 aa8.14□□□□□ -1.11
VAMP3-201ENST00000054666 CLP1Q92989 425 aaKnown RBP8.14□□□□□ -1.11
VAMP3-201ENST00000054666 ECHDC3Q96DC8 303 aa8.14□□□□□ -1.11
VAMP3-201ENST00000054666 SCRN2Q96FV2 425 aa8.14□□□□□ -1.11
VAMP3-201ENST00000054666 ZNF641Q96N77 438 aaPredicted RBP8.14□□□□□ -1.11
VAMP3-201ENST00000054666 COPS8Q99627 209 aa8.14□□□□□ -1.11
VAMP3-201ENST00000054666 SLC39A3Q9BRY0 314 aa8.14□□□□□ -1.11
VAMP3-201ENST00000054666 TRIM54Q9BYV2 358 aa8.14□□□□□ -1.11
VAMP3-201ENST00000054666 CPEB1Q9BZB8 566 aaKnown RBP8.14□□□□□ -1.11
VAMP3-201ENST00000054666 BRINP2Q9C0B6 783 aa8.14□□□□□ -1.11
VAMP3-201ENST00000054666 PCDHAC1Q9H158 963 aa8.14□□□□□ -1.11
VAMP3-201ENST00000054666 IL1RL2Q9HB29 575 aa8.14□□□□□ -1.11
VAMP3-201ENST00000054666 GEMIN8Q9NWZ8 242 aaKnown RBP8.14□□□□□ -1.11
VAMP3-201ENST00000054666 ZDHHC3Q9NYG2 299 aa8.14□□□□□ -1.11
VAMP3-201ENST00000054666 ZIM2Q9NZV7 527 aa8.14□□□□□ -1.11
VAMP3-201ENST00000054666 OPTCQ9UBM4 332 aa8.14□□□□□ -1.11
VAMP3-201ENST00000054666 LEF1Q9UJU2 399 aaPredicted RBP8.14□□□□□ -1.11
VAMP3-201ENST00000054666 GPR45Q9Y5Y3 372 aa8.14□□□□□ -1.11
VAMP3-201ENST00000054666 PRSS21Q9Y6M0 314 aa8.14□□□□□ -1.11
VAMP3-201ENST00000054666 A6NHS1 94 aa8.14□□□□□ -1.11
VAMP3-201ENST00000054666 CCDC154A6NI56 674 aa8.14□□□□□ -1.11
VAMP3-201ENST00000054666 C9JVG2 144 aa8.14□□□□□ -1.11
VAMP3-201ENST00000054666 SYNCRIPO60506 623 aaKnown RBP8.14□□□□□ -1.11
VAMP3-201ENST00000054666 SLC22A3O75751 556 aa8.14□□□□□ -1.11
VAMP3-201ENST00000054666 CAPN1P07384 714 aa8.14□□□□□ -1.11
VAMP3-201ENST00000054666 LYNP07948 512 aa8.14□□□□□ -1.11
VAMP3-201ENST00000054666 OR56A5P0C7T3 313 aa8.14□□□□□ -1.11
VAMP3-201ENST00000054666 CBSLP0DN79 551 aa8.14□□□□□ -1.11
VAMP3-201ENST00000054666 CBSP35520 551 aa8.14□□□□□ -1.11
VAMP3-201ENST00000054666 PIK3CGP48736 1102 aa8.14□□□□□ -1.11
VAMP3-201ENST00000054666 HSPA7P48741 367 aa8.14□□□□□ -1.11
VAMP3-201ENST00000054666 ERVPABLB-1P60509 514 aa8.14□□□□□ -1.11
VAMP3-201ENST00000054666 POLR2LP62875 67 aaKnown RBP8.14□□□□□ -1.11
VAMP3-201ENST00000054666 RHDQ02161 417 aa8.14□□□□□ -1.11
VAMP3-201ENST00000054666 RCAN2Q14206 197 aa8.14□□□□□ -1.11
VAMP3-201ENST00000054666 DMC1Q14565 340 aa8.14□□□□□ -1.11
VAMP3-201ENST00000054666 TEAD2Q15562 447 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms