RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 TCF12Q99081 682 aa12.98□□□□□ -0.33
CTNS-201ENST00000046640 NAA50Q9GZZ1 169 aaKnown RBP12.98□□□□□ -0.33
CTNS-201ENST00000046640 SMG9Q9H0W8 520 aaKnown RBP12.98□□□□□ -0.33
CTNS-201ENST00000046640 ZNF334Q9HCZ1 680 aaPredicted RBP12.98□□□□□ -0.33
CTNS-201ENST00000046640 TIMMDC1Q9NPL8 285 aa12.98□□□□□ -0.33
CTNS-201ENST00000046640 SLAMF8Q9P0V8 285 aa12.98□□□□□ -0.33
CTNS-201ENST00000046640 AFF4Q9UHB7 1163 aaKnown RBP12.98□□□□□ -0.33
CTNS-201ENST00000046640 TRIM17Q9Y577 477 aa12.98□□□□□ -0.33
CTNS-201ENST00000046640 DHRS12A0PJE2 317 aa12.98□□□□□ -0.33
CTNS-201ENST00000046640 HOXA2O43364 376 aa12.98□□□□□ -0.33
CTNS-201ENST00000046640 TSPAN12O95859 305 aa12.98□□□□□ -0.33
CTNS-201ENST00000046640 PSMD7P51665 324 aa12.98□□□□□ -0.33
CTNS-201ENST00000046640 ESRRGP62508 458 aa12.98□□□□□ -0.33
CTNS-201ENST00000046640 ZIK1Q3SY52 487 aaPredicted RBP12.98□□□□□ -0.33
CTNS-201ENST00000046640 GPSM1Q86YR5 675 aa12.98□□□□□ -0.33
CTNS-201ENST00000046640 EPHX4Q8IUS5 362 aa12.98□□□□□ -0.33
CTNS-201ENST00000046640 ERI1Q8IV48 349 aaKnown RBP12.98□□□□□ -0.33
CTNS-201ENST00000046640 NAT16Q8N8M0 369 aa12.98□□□□□ -0.33
CTNS-201ENST00000046640 PDZD8Q8NEN9 1154 aa12.98□□□□□ -0.33
CTNS-201ENST00000046640 MAGEE2Q8TD90 523 aaPredicted RBP12.98□□□□□ -0.33
CTNS-201ENST00000046640 PLD4Q96BZ4 506 aa12.98□□□□□ -0.33
CTNS-201ENST00000046640 CDK5RAP1Q96SZ6 601 aaKnown RBP12.98□□□□□ -0.33
CTNS-201ENST00000046640 TMEM175Q9BSA9 504 aa12.98□□□□□ -0.33
CTNS-201ENST00000046640 CWH43Q9H720 699 aa12.98□□□□□ -0.33
CTNS-201ENST00000046640 ZMYM5Q9UJ78 669 aa12.98□□□□□ -0.33
CTNS-201ENST00000046640 TRIM16O95361 564 aa12.97□□□□□ -0.33
CTNS-201ENST00000046640 LBPP18428 481 aa12.97□□□□□ -0.33
CTNS-201ENST00000046640 UFM1P61960 85 aa12.97□□□□□ -0.33
CTNS-201ENST00000046640 ADRM1Q16186 407 aa12.97□□□□□ -0.33
CTNS-201ENST00000046640 CYP51A1Q16850 503 aa12.97□□□□□ -0.33
CTNS-201ENST00000046640 KCTD21Q4G0X4 260 aa12.97□□□□□ -0.33
CTNS-201ENST00000046640 LRRC73Q5JTD7 316 aa12.97□□□□□ -0.33
CTNS-201ENST00000046640 XKR5Q6UX68 686 aa12.97□□□□□ -0.33
CTNS-201ENST00000046640 TMEM150AQ86TG1 271 aa12.97□□□□□ -0.33
CTNS-201ENST00000046640 PHYKPLQ8IUZ5 450 aa12.97□□□□□ -0.33
CTNS-201ENST00000046640 CMTR2Q8IYT2 770 aaKnown RBP12.97□□□□□ -0.33
CTNS-201ENST00000046640 OR2T11Q8NH01 316 aa12.97□□□□□ -0.33
CTNS-201ENST00000046640 ISOC1Q96CN7 298 aa12.97□□□□□ -0.33
CTNS-201ENST00000046640 TMEM74Q96NL1 305 aa12.97□□□□□ -0.33
CTNS-201ENST00000046640 APOL5Q9BWW9 433 aa12.97□□□□□ -0.33
CTNS-201ENST00000046640 MRPL40Q9NQ50 206 aaKnown RBP12.97□□□□□ -0.33
CTNS-201ENST00000046640 PKP3Q9Y446 797 aa12.97□□□□□ -0.33
CTNS-201ENST00000046640 CPQQ9Y646 472 aa12.97□□□□□ -0.33
CTNS-201ENST00000046640 SLC30A1Q9Y6M5 507 aa12.97□□□□□ -0.33
CTNS-201ENST00000046640 EI24O14681 340 aa12.97□□□□□ -0.33
CTNS-201ENST00000046640 CNPP09543 421 aaKnown RBP12.97□□□□□ -0.33
CTNS-201ENST00000046640 GDF5P43026 501 aa12.97□□□□□ -0.33
CTNS-201ENST00000046640 TTPAP49638 278 aa12.97□□□□□ -0.33
CTNS-201ENST00000046640 OTUD3Q5T2D3 398 aaPredicted RBP12.97□□□□□ -0.33
CTNS-201ENST00000046640 NCEH1Q6PIU2 408 aa12.97□□□□□ -0.33
CTNS-201ENST00000046640 SLC15A3Q8IY34 581 aa12.97□□□□□ -0.33
CTNS-201ENST00000046640 PCYOX1LQ8NBM8 494 aa12.97□□□□□ -0.33
CTNS-201ENST00000046640 TFAP2CQ92754 450 aa12.97□□□□□ -0.33
CTNS-201ENST00000046640 PEX13Q92968 403 aa12.97□□□□□ -0.33
CTNS-201ENST00000046640 TMEM169Q96HH4 297 aa12.97□□□□□ -0.33
CTNS-201ENST00000046640 ADI1Q9BV57 179 aa12.97□□□□□ -0.33
CTNS-201ENST00000046640 PAIP1Q9H074 479 aaKnown RBP12.97□□□□□ -0.33
CTNS-201ENST00000046640 LHX3Q9UBR4 397 aa12.97□□□□□ -0.33
CTNS-201ENST00000046640 CNOT11Q9UKZ1 510 aaKnown RBP12.97□□□□□ -0.33
CTNS-201ENST00000046640 NDUFAF1Q9Y375 327 aa12.97□□□□□ -0.33
CTNS-201ENST00000046640 ARIH1Q9Y4X5 557 aaPredicted RBP12.97□□□□□ -0.33
CTNS-201ENST00000046640 OAS3Q9Y6K5 1087 aaKnown RBP12.97□□□□□ -0.33
CTNS-201ENST00000046640 B4GAT1O43505 415 aa12.96□□□□□ -0.33
CTNS-201ENST00000046640 ATP6V1G1O75348 118 aa12.96□□□□□ -0.33
CTNS-201ENST00000046640 CAPNS1P04632 268 aa12.96□□□□□ -0.33
CTNS-201ENST00000046640 FGF4P08620 206 aa12.96□□□□□ -0.33
CTNS-201ENST00000046640 IL10P22301 178 aa12.96□□□□□ -0.33
CTNS-201ENST00000046640 ALDH3B2P48448 385 aa12.96□□□□□ -0.33
CTNS-201ENST00000046640 TRAP1Q12931 704 aaKnown RBP12.96□□□□□ -0.33
CTNS-201ENST00000046640 BTG3Q14201 252 aaPredicted RBP12.96□□□□□ -0.33
CTNS-201ENST00000046640 VEPH1Q14D04 833 aa12.96□□□□□ -0.33
CTNS-201ENST00000046640 ERMP1Q7Z2K6 904 aa12.96□□□□□ -0.33
CTNS-201ENST00000046640 TTC30BQ8N4P2 665 aa12.96□□□□□ -0.33
CTNS-201ENST00000046640 VPS50Q96JG6 964 aa12.96□□□□□ -0.33
CTNS-201ENST00000046640 CIPCQ9C0C6 399 aa12.96□□□□□ -0.33
CTNS-201ENST00000046640 TMEM165Q9HC07 324 aa12.96□□□□□ -0.33
CTNS-201ENST00000046640 COMMD8Q9NX08 183 aa12.96□□□□□ -0.33
CTNS-201ENST00000046640 CMTM6Q9NX76 183 aa12.96□□□□□ -0.33
CTNS-201ENST00000046640 PCTPQ9UKL6 214 aa12.96□□□□□ -0.33
CTNS-201ENST00000046640 SLC8A2Q9UPR5 921 aa12.96□□□□□ -0.33
CTNS-201ENST00000046640 C1orf232A0A0U1RR37 186 aa12.96□□□□□ -0.34
CTNS-201ENST00000046640 NRG2O14511 850 aaPredicted RBP12.96□□□□□ -0.34
CTNS-201ENST00000046640 CLOCKO15516 846 aa12.96□□□□□ -0.34
CTNS-201ENST00000046640 ATE1O95260 518 aa12.96□□□□□ -0.34
CTNS-201ENST00000046640 CLDN7O95471 211 aa12.96□□□□□ -0.34
CTNS-201ENST00000046640 EEF1B2P24534 225 aaKnown RBP12.96□□□□□ -0.34
CTNS-201ENST00000046640 MERTKQ12866 999 aa12.96□□□□□ -0.34
CTNS-201ENST00000046640 PMS2P3Q13401 168 aa12.96□□□□□ -0.34
CTNS-201ENST00000046640 TGFBIQ15582 683 aa12.96□□□□□ -0.34
CTNS-201ENST00000046640 PTRHD1Q6GMV3 140 aaKnown RBP12.96□□□□□ -0.34
CTNS-201ENST00000046640 PPP4R4Q6NUP7 873 aa12.96□□□□□ -0.34
CTNS-201ENST00000046640 TMEM26Q6ZUK4 368 aa12.96□□□□□ -0.34
CTNS-201ENST00000046640 FRA10AC1Q70Z53 315 aa12.96□□□□□ -0.34
CTNS-201ENST00000046640 LKAAEAR1Q8TD35 194 aa12.96□□□□□ -0.34
CTNS-201ENST00000046640 ERLEC1Q96DZ1 483 aa12.96□□□□□ -0.34
CTNS-201ENST00000046640 THAP11Q96EK4 314 aa12.96□□□□□ -0.34
CTNS-201ENST00000046640 C17orf80Q9BSJ5 609 aa12.96□□□□□ -0.34
CTNS-201ENST00000046640 ANKRD60Q9BZ19 345 aa12.96□□□□□ -0.34
CTNS-201ENST00000046640 ZNF510Q9Y2H8 683 aa12.96□□□□□ -0.34
CTNS-201ENST00000046640 ANKRD36A6QL64 1941 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms