RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 ZRSR2Q15696 482 aaKnown RBP14.1□□□□□ -0.15
RTFDC1-201ENST00000023939 TRMT5Q32P41 509 aaKnown RBP14.1□□□□□ -0.15
RTFDC1-201ENST00000023939 ERAP2Q6P179 960 aa14.1□□□□□ -0.15
RTFDC1-201ENST00000023939 TTC23LQ6PF05 361 aa14.1□□□□□ -0.15
RTFDC1-201ENST00000023939 FRA10AC1Q70Z53 315 aa14.1□□□□□ -0.15
RTFDC1-201ENST00000023939 GET4Q7L5D6 327 aaPredicted RBP14.1□□□□□ -0.15
RTFDC1-201ENST00000023939 SNX32Q86XE0 403 aa14.1□□□□□ -0.15
RTFDC1-201ENST00000023939 HOMEZQ8IX15 550 aa14.1□□□□□ -0.15
RTFDC1-201ENST00000023939 DDHD1Q8NEL9 900 aa14.1□□□□□ -0.15
RTFDC1-201ENST00000023939 ZFYVE19Q96K21 471 aa14.1□□□□□ -0.15
RTFDC1-201ENST00000023939 HGH1Q9BTY7 390 aa14.1□□□□□ -0.15
RTFDC1-201ENST00000023939 ZSCAN5AQ9BUG6 496 aa14.1□□□□□ -0.15
RTFDC1-201ENST00000023939 MTG2Q9H4K7 406 aa14.1□□□□□ -0.15
RTFDC1-201ENST00000023939 ZFP14Q9HCL3 533 aa14.1□□□□□ -0.15
RTFDC1-201ENST00000023939 NDE1Q9NXR1 346 aa14.1□□□□□ -0.15
RTFDC1-201ENST00000023939 PPM1HQ9ULR3 514 aa14.1□□□□□ -0.15
RTFDC1-201ENST00000023939 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.1□□□□□ -0.15
RTFDC1-201ENST00000023939 MUC22E2RYF6 1773 aaPredicted RBP14.1□□□□□ -0.15
RTFDC1-201ENST00000023939 NCF1BA6NI72 391 aaPredicted RBP14.1□□□□□ -0.15
RTFDC1-201ENST00000023939 CCDC85CA6NKD9 419 aa14.1□□□□□ -0.15
RTFDC1-201ENST00000023939 NCF1CA8MVU1 366 aaPredicted RBP14.1□□□□□ -0.15
RTFDC1-201ENST00000023939 MEI4A8MW99 385 aa14.1□□□□□ -0.15
RTFDC1-201ENST00000023939 H0Y858 1186 aa14.1□□□□□ -0.15
RTFDC1-201ENST00000023939 KPNA5O15131 536 aa14.1□□□□□ -0.15
RTFDC1-201ENST00000023939 NUAK1O60285 661 aa14.1□□□□□ -0.15
RTFDC1-201ENST00000023939 GPC4O75487 556 aa14.1□□□□□ -0.15
RTFDC1-201ENST00000023939 UROSP10746 265 aa14.1□□□□□ -0.15
RTFDC1-201ENST00000023939 NCF1P14598 390 aaPredicted RBP14.1□□□□□ -0.15
RTFDC1-201ENST00000023939 ITGB6P18564 788 aa14.1□□□□□ -0.15
RTFDC1-201ENST00000023939 ITGB7P26010 798 aa14.1□□□□□ -0.15
RTFDC1-201ENST00000023939 AOAHP28039 575 aa14.1□□□□□ -0.15
RTFDC1-201ENST00000023939 ACADVLP49748 655 aa14.1□□□□□ -0.15
RTFDC1-201ENST00000023939 FOXA1P55317 472 aa14.1□□□□□ -0.15
RTFDC1-201ENST00000023939 MESP2Q0VG99 397 aa14.1□□□□□ -0.15
RTFDC1-201ENST00000023939 CUL3Q13618 768 aa14.1□□□□□ -0.15
RTFDC1-201ENST00000023939 MAPRE2Q15555 327 aa14.1□□□□□ -0.15
RTFDC1-201ENST00000023939 LRRC73Q5JTD7 316 aa14.1□□□□□ -0.15
RTFDC1-201ENST00000023939 C9orf64Q5T6V5 341 aa14.1□□□□□ -0.15
RTFDC1-201ENST00000023939 ANKRD54Q6NXT1 300 aa14.1□□□□□ -0.15
RTFDC1-201ENST00000023939 SYCE2Q6PIF2 218 aa14.1□□□□□ -0.15
RTFDC1-201ENST00000023939 VITQ6UXI7 678 aa14.1□□□□□ -0.15
RTFDC1-201ENST00000023939 Q6ZVL8 140 aa14.1□□□□□ -0.15
RTFDC1-201ENST00000023939 PARS2Q7L3T8 475 aaKnown RBP14.1□□□□□ -0.15
RTFDC1-201ENST00000023939 PHYKPLQ8IUZ5 450 aa14.1□□□□□ -0.15
RTFDC1-201ENST00000023939 CPA6Q8N4T0 437 aa14.1□□□□□ -0.15
RTFDC1-201ENST00000023939 FAM161BQ96MY7 647 aa14.1□□□□□ -0.15
RTFDC1-201ENST00000023939 VPS35Q96QK1 796 aa14.1□□□□□ -0.15
RTFDC1-201ENST00000023939 SPATA16Q9BXB7 569 aa14.1□□□□□ -0.15
RTFDC1-201ENST00000023939 TMEM245Q9H330 911 aa14.1□□□□□ -0.15
RTFDC1-201ENST00000023939 DCLRE1BQ9H816 532 aa14.1□□□□□ -0.15
RTFDC1-201ENST00000023939 SEMA4BQ9NPR2 832 aaPredicted RBP14.1□□□□□ -0.15
RTFDC1-201ENST00000023939 PFDN4Q9NQP4 134 aa14.1□□□□□ -0.15
RTFDC1-201ENST00000023939 SLC7A8Q9UHI5 535 aa14.1□□□□□ -0.15
RTFDC1-201ENST00000023939 ST14Q9Y5Y6 855 aa14.1□□□□□ -0.15
RTFDC1-201ENST00000023939 PLXNA2O75051 1894 aa14.09□□□□□ -0.15
RTFDC1-201ENST00000023939 CFAP99D6REC4 459 aa14.09□□□□□ -0.15
RTFDC1-201ENST00000023939 QSOX1O00391 747 aa14.09□□□□□ -0.15
RTFDC1-201ENST00000023939 PIP5K1BO14986 540 aa14.09□□□□□ -0.15
RTFDC1-201ENST00000023939 ENTPD5O75356 428 aa14.09□□□□□ -0.15
RTFDC1-201ENST00000023939 CIB2O75838 187 aa14.09□□□□□ -0.15
RTFDC1-201ENST00000023939 ENO2P09104 434 aaPredicted RBP14.09□□□□□ -0.15
RTFDC1-201ENST00000023939 ATP1B2P14415 290 aaPredicted RBP14.09□□□□□ -0.15
RTFDC1-201ENST00000023939 VCLP18206 1134 aa14.09□□□□□ -0.15
RTFDC1-201ENST00000023939 EIF2DP41214 584 aaKnown RBP14.09□□□□□ -0.15
RTFDC1-201ENST00000023939 MRPL19P49406 292 aaKnown RBP14.09□□□□□ -0.15
RTFDC1-201ENST00000023939 ELAVL3Q14576 367 aaKnown RBP14.09□□□□□ -0.15
RTFDC1-201ENST00000023939 KPNB1Q14974 876 aaKnown RBP14.09□□□□□ -0.15
RTFDC1-201ENST00000023939 C6orf163Q5TEZ5 329 aa14.09□□□□□ -0.15
RTFDC1-201ENST00000023939 TANGO2Q6ICL3 276 aa14.09□□□□□ -0.15
RTFDC1-201ENST00000023939 SULT1C3Q6IMI6 304 aa14.09□□□□□ -0.15
RTFDC1-201ENST00000023939 OGFOD2Q6N063 350 aa14.09□□□□□ -0.15
RTFDC1-201ENST00000023939 C16orf89Q6UX73 402 aa14.09□□□□□ -0.15
RTFDC1-201ENST00000023939 LIPIQ6XZB0 460 aa14.09□□□□□ -0.15
RTFDC1-201ENST00000023939 GPRIN3Q6ZVF9 776 aa14.09□□□□□ -0.15
RTFDC1-201ENST00000023939 CYP2U1Q7Z449 544 aa14.09□□□□□ -0.15
RTFDC1-201ENST00000023939 SYVN1Q86TM6 617 aa14.09□□□□□ -0.15
RTFDC1-201ENST00000023939 TERB1Q8NA31 727 aa14.09□□□□□ -0.15
RTFDC1-201ENST00000023939 KYQ8NBH2 561 aa14.09□□□□□ -0.15
RTFDC1-201ENST00000023939 WDR60Q8WVS4 1066 aa14.09□□□□□ -0.15
RTFDC1-201ENST00000023939 OR8D1Q8WZ84 308 aa14.09□□□□□ -0.15
RTFDC1-201ENST00000023939 DCUN1D1Q96GG9 259 aa14.09□□□□□ -0.15
RTFDC1-201ENST00000023939 C3orf30Q96M34 536 aa14.09□□□□□ -0.15
RTFDC1-201ENST00000023939 TUBB1Q9H4B7 451 aa14.09□□□□□ -0.15
RTFDC1-201ENST00000023939 AKTIPQ9H8T0 292 aa14.09□□□□□ -0.15
RTFDC1-201ENST00000023939 SLC28A3Q9HAS3 691 aa14.09□□□□□ -0.15
RTFDC1-201ENST00000023939 EIF2B4Q9UI10 523 aaKnown RBP14.09□□□□□ -0.15
RTFDC1-201ENST00000023939 ZNF225Q9UK10 706 aa14.09□□□□□ -0.15
RTFDC1-201ENST00000023939 PRPF19Q9UMS4 504 aaKnown RBP14.09□□□□□ -0.15
RTFDC1-201ENST00000023939 A0A1B0GTL3 188 aa14.08□□□□□ -0.16
RTFDC1-201ENST00000023939 PSMD12O00232 456 aaPredicted RBP14.08□□□□□ -0.16
RTFDC1-201ENST00000023939 PRR35P0CG20 571 aa14.08□□□□□ -0.16
RTFDC1-201ENST00000023939 MPC1LP0DKB6 136 aa14.08□□□□□ -0.16
RTFDC1-201ENST00000023939 CCR7P32248 378 aa14.08□□□□□ -0.16
RTFDC1-201ENST00000023939 OPRD1P41143 372 aa14.08□□□□□ -0.16
RTFDC1-201ENST00000023939 ETV3P41162 512 aa14.08□□□□□ -0.16
RTFDC1-201ENST00000023939 ACTR3P61158 418 aa14.08□□□□□ -0.16
RTFDC1-201ENST00000023939 CDKL1Q00532 357 aa14.08□□□□□ -0.16
RTFDC1-201ENST00000023939 ZNF284Q2VY69 593 aa14.08□□□□□ -0.16
RTFDC1-201ENST00000023939 KHDC1Q4VXA5 237 aaKnown RBP14.08□□□□□ -0.16
RTFDC1-201ENST00000023939 FNDC3BQ53EP0 1204 aaKnown RBP14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 108.6 ms