RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 C7P10643 843 aa13.86□□□□□ -0.19
USH1C-201ENST00000005226 UROSP10746 265 aa13.86□□□□□ -0.19
USH1C-201ENST00000005226 RPL9P32969 192 aaKnown RBP13.86□□□□□ -0.19
USH1C-201ENST00000005226 IDUAP35475 653 aa13.86□□□□□ -0.19
USH1C-201ENST00000005226 ERVK-8P63133 956 aa13.86□□□□□ -0.19
USH1C-201ENST00000005226 ACVR1Q04771 509 aa13.86□□□□□ -0.19
USH1C-201ENST00000005226 ZNF235Q14590 738 aa13.86□□□□□ -0.19
USH1C-201ENST00000005226 DPY19L1Q2PZI1 675 aa13.86□□□□□ -0.19
USH1C-201ENST00000005226 ATP6AP1LQ52LC2 224 aa13.86□□□□□ -0.19
USH1C-201ENST00000005226 COQ5Q5HYK3 327 aa13.86□□□□□ -0.19
USH1C-201ENST00000005226 IL27RAQ6UWB1 636 aa13.86□□□□□ -0.19
USH1C-201ENST00000005226 GPRIN3Q6ZVF9 776 aa13.86□□□□□ -0.19
USH1C-201ENST00000005226 THAP5Q7Z6K1 395 aa13.86□□□□□ -0.19
USH1C-201ENST00000005226 LRRC49Q8IUZ0 686 aa13.86□□□□□ -0.19
USH1C-201ENST00000005226 TMCO5AQ8N6Q1 288 aa13.86□□□□□ -0.19
USH1C-201ENST00000005226 BRSK1Q8TDC3 778 aa13.86□□□□□ -0.19
USH1C-201ENST00000005226 ISG20Q96AZ6 181 aaKnown RBP13.86□□□□□ -0.19
USH1C-201ENST00000005226 C17orf80Q9BSJ5 609 aa13.86□□□□□ -0.19
USH1C-201ENST00000005226 BEGAINQ9BUH8 593 aa13.86□□□□□ -0.19
USH1C-201ENST00000005226 DERL2Q9GZP9 239 aa13.86□□□□□ -0.19
USH1C-201ENST00000005226 IKZF5Q9H5V7 419 aa13.86□□□□□ -0.19
USH1C-201ENST00000005226 TMEM248Q9NWD8 314 aa13.86□□□□□ -0.19
USH1C-201ENST00000005226 GPR182O15218 404 aa13.86□□□□□ -0.19
USH1C-201ENST00000005226 B4GALT3O60512 393 aa13.86□□□□□ -0.19
USH1C-201ENST00000005226 BCAS1O75363 584 aaPredicted RBP13.86□□□□□ -0.19
USH1C-201ENST00000005226 CLPXO76031 633 aa13.86□□□□□ -0.19
USH1C-201ENST00000005226 CHEK2O96017 543 aa13.86□□□□□ -0.19
USH1C-201ENST00000005226 CAPN1P07384 714 aa13.86□□□□□ -0.19
USH1C-201ENST00000005226 ENO2P09104 434 aaPredicted RBP13.86□□□□□ -0.19
USH1C-201ENST00000005226 ZNF12P17014 697 aa13.86□□□□□ -0.19
USH1C-201ENST00000005226 HTR1BP28222 390 aa13.86□□□□□ -0.19
USH1C-201ENST00000005226 RAD23AP54725 363 aa13.86□□□□□ -0.19
USH1C-201ENST00000005226 TMBIM6P55061 237 aa13.86□□□□□ -0.19
USH1C-201ENST00000005226 SFSWAPQ12872 951 aaKnown RBP13.86□□□□□ -0.19
USH1C-201ENST00000005226 PRKG2Q13237 762 aa13.86□□□□□ -0.19
USH1C-201ENST00000005226 RFTN2Q52LD8 501 aaPredicted RBP13.86□□□□□ -0.19
USH1C-201ENST00000005226 LAIR2Q6ISS4 152 aa13.86□□□□□ -0.19
USH1C-201ENST00000005226 PSAPL1Q6NUJ1 521 aa13.86□□□□□ -0.19
USH1C-201ENST00000005226 TMEM179BQ7Z7N9 219 aa13.86□□□□□ -0.19
USH1C-201ENST00000005226 ZFAND4Q86XD8 727 aa13.86□□□□□ -0.19
USH1C-201ENST00000005226 PROSER1Q86XN7 944 aa13.86□□□□□ -0.19
USH1C-201ENST00000005226 FAM126BQ8IXS8 530 aa13.86□□□□□ -0.19
USH1C-201ENST00000005226 THEM5Q8N1Q8 247 aa13.86□□□□□ -0.19
USH1C-201ENST00000005226 MDGA1Q8NFP4 955 aa13.86□□□□□ -0.19
USH1C-201ENST00000005226 ABHD11Q8NFV4 315 aa13.86□□□□□ -0.19
USH1C-201ENST00000005226 GPR150Q8NGU9 434 aa13.86□□□□□ -0.19
USH1C-201ENST00000005226 OR10A6Q8NH74 314 aa13.86□□□□□ -0.19
USH1C-201ENST00000005226 ZC3H15Q8WU90 426 aaKnown RBP13.86□□□□□ -0.19
USH1C-201ENST00000005226 TADA1Q96BN2 335 aa13.86□□□□□ -0.19
USH1C-201ENST00000005226 C1orf74Q96LT6 269 aa13.86□□□□□ -0.19
USH1C-201ENST00000005226 MBOAT4Q96T53 435 aa13.86□□□□□ -0.19
USH1C-201ENST00000005226 BRINP2Q9C0B6 783 aa13.86□□□□□ -0.19
USH1C-201ENST00000005226 SYTL2Q9HCH5 934 aa13.86□□□□□ -0.19
USH1C-201ENST00000005226 RIC8BQ9NVN3 520 aa13.86□□□□□ -0.19
USH1C-201ENST00000005226 FAM118AQ9NWS6 357 aa13.86□□□□□ -0.19
USH1C-201ENST00000005226 VAPAQ9P0L0 249 aa13.86□□□□□ -0.19
USH1C-201ENST00000005226 LIMD1Q9UGP4 676 aa13.86□□□□□ -0.19
USH1C-201ENST00000005226 TLR6Q9Y2C9 796 aa13.86□□□□□ -0.19
USH1C-201ENST00000005226 POLR3HQ9Y535 204 aaPredicted RBP13.86□□□□□ -0.19
USH1C-201ENST00000005226 LCHNA4D1U4 455 aa13.85□□□□□ -0.19
USH1C-201ENST00000005226 TMEM221A6NGB7 291 aa13.85□□□□□ -0.19
USH1C-201ENST00000005226 G3V2T6 193 aa13.85□□□□□ -0.19
USH1C-201ENST00000005226 H0YAE9 185 aa13.85□□□□□ -0.19
USH1C-201ENST00000005226 M0QZ92 97 aa13.85□□□□□ -0.19
USH1C-201ENST00000005226 ABCB7O75027 752 aa13.85□□□□□ -0.19
USH1C-201ENST00000005226 VPS4BO75351 444 aa13.85□□□□□ -0.19
USH1C-201ENST00000005226 DEAF1O75398 565 aaPredicted RBP13.85□□□□□ -0.19
USH1C-201ENST00000005226 ANXA6P08133 673 aa13.85□□□□□ -0.19
USH1C-201ENST00000005226 HTR7P34969 479 aa13.85□□□□□ -0.19
USH1C-201ENST00000005226 MAGEA8P43361 318 aa13.85□□□□□ -0.19
USH1C-201ENST00000005226 CHRNB3Q05901 458 aa13.85□□□□□ -0.19
USH1C-201ENST00000005226 SERINC3Q13530 473 aa13.85□□□□□ -0.19
USH1C-201ENST00000005226 LDLRAD1Q5T700 205 aa13.85□□□□□ -0.19
USH1C-201ENST00000005226 SULT1C3Q6IMI6 304 aa13.85□□□□□ -0.19
USH1C-201ENST00000005226 CRTC3Q6UUV7 619 aa13.85□□□□□ -0.19
USH1C-201ENST00000005226 OR7D4Q8NG98 312 aa13.85□□□□□ -0.19
USH1C-201ENST00000005226 METTL6Q8TCB7 284 aa13.85□□□□□ -0.19
USH1C-201ENST00000005226 CHPT1Q8WUD6 406 aa13.85□□□□□ -0.19
USH1C-201ENST00000005226 LINGO1Q96FE5 620 aa13.85□□□□□ -0.19
USH1C-201ENST00000005226 CCDC138Q96M89 665 aa13.85□□□□□ -0.19
USH1C-201ENST00000005226 ZNF583Q96ND8 569 aa13.85□□□□□ -0.19
USH1C-201ENST00000005226 CGREF1Q99674 301 aa13.85□□□□□ -0.19
USH1C-201ENST00000005226 SPON2Q9BUD6 331 aa13.85□□□□□ -0.19
USH1C-201ENST00000005226 POLR1EQ9GZS1 481 aaKnown RBP13.85□□□□□ -0.19
USH1C-201ENST00000005226 PAIP2BQ9ULR5 123 aaKnown RBP13.85□□□□□ -0.19
USH1C-201ENST00000005226 CD47Q08722 323 aa13.85□□□□□ -0.19
USH1C-201ENST00000005226 PTGR1Q14914 329 aa13.85□□□□□ -0.19
USH1C-201ENST00000005226 LAPTM4AQ15012 233 aa13.85□□□□□ -0.19
USH1C-201ENST00000005226 RGS21Q2M5E4 152 aa13.85□□□□□ -0.19
USH1C-201ENST00000005226 SPESP1Q6UW49 350 aa13.85□□□□□ -0.19
USH1C-201ENST00000005226 CXCL17Q6UXB2 119 aa13.85□□□□□ -0.19
USH1C-201ENST00000005226 BEND5Q7L4P6 421 aa13.85□□□□□ -0.19
USH1C-201ENST00000005226 ZDHHC13Q8IUH4 622 aa13.85□□□□□ -0.19
USH1C-201ENST00000005226 C8orf59Q8N0T1 100 aaPredicted RBP13.85□□□□□ -0.19
USH1C-201ENST00000005226 SCML4Q8N228 414 aa13.85□□□□□ -0.19
USH1C-201ENST00000005226 CHDHQ8NE62 594 aaPredicted RBP13.85□□□□□ -0.19
USH1C-201ENST00000005226 CCDC97Q96F63 343 aaPredicted RBP13.85□□□□□ -0.19
USH1C-201ENST00000005226 TUBA1CQ9BQE3 449 aa13.85□□□□□ -0.19
USH1C-201ENST00000005226 THUMPD3Q9BV44 507 aaKnown RBP13.85□□□□□ -0.19
USH1C-201ENST00000005226 TRIM62Q9BVG3 475 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms