RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 Acsl5Q8JZR0 683 aa9.63□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 RhoqQ8R527 205 aa9.63□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Olfr697Q8VFM4 317 aa9.63□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Olfr348Q8VGK3 313 aa9.63□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Tbc1d20Q9D9I4 402 aa9.63□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Ddi1Q9DAF3 408 aa9.63□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Vmn2r38G3UYA8 861 aa9.63□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Vmn2r33K7N705 861 aa9.63□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Orm2P07361 207 aa9.63□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 DbtP53395 482 aa9.63□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 AnpepP97449 966 aa9.63□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Sec31bQ3TZ89 1158 aa9.63□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Nol9Q3TZX8 714 aa9.63□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Olfml2bQ3V1G4 746 aa9.63□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Clec12aQ504P2 267 aa9.63□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Dmc1Q61880 340 aa9.63□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Fnip1Q68FD7 1165 aa9.63□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Slc39a4Q78IQ7 660 aa9.63□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Lair1Q8BG84 263 aa9.63□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 R3hcc1lQ8BJM3 775 aaKnown RBP9.63□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Slco2b1Q8BXB6 683 aa9.63□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Fam126bQ8C729 530 aa9.63□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Rpl17Q9CPR4 184 aaKnown RBP9.63□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Mfsd10Q9D2V8 456 aaKnown RBP9.63□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 PgdQ9DCD0 483 aa9.63□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Pak1ip1Q9DCE5 382 aaKnown RBP9.63□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Ndst3Q9EQH7 873 aa9.63□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Msgn1Q9JK54 188 aa9.63□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Syt5Q9R0N5 386 aa9.63□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Man1b1A2AJ15 658 aa9.63□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Ifit3bE9PV48 403 aa9.63□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Prpmp5E9PXN1 296 aa9.63□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Vmn2r46L7N282 809 aa9.63□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 TecP24604 630 aa9.63□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Apex1P28352 317 aaKnown RBP9.63□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Smpd1Q04519 627 aa9.63□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Alg6Q3TAE8 507 aa9.63□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Kctd21Q3URF8 260 aa9.63□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Arcn1Q5XJY5 511 aaKnown RBP9.63□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Fam149b1Q6NSV7 578 aa9.63□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Svs1Q6WIZ7 820 aa9.63□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Olfr1046Q7TR79 316 aa9.63□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Dsg1bQ7TSF1 1060 aa9.63□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Mrps35Q8BJZ4 320 aaKnown RBP9.63□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Rmdn2Q8BSE0 410 aa9.63□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Cacnb2Q8CC27 655 aa9.63□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Hmgcll1Q8JZS7 343 aa9.63□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Trim31Q8R0K2 507 aa9.63□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Mcoln3Q8R4F0 553 aa9.63□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Pin4Q9CWW6 131 aa9.63□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Alg13Q9D8C3 1166 aaKnown RBP9.63□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Tex22Q9D9U4 189 aa9.63□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Gm31371A0A1D5RM70 265 aa9.62□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Fam131cA2ADB2 273 aa9.62□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Xpnpep3B7ZMP1 506 aaKnown RBP9.62□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 S100zB9EJL3 99 aa9.62□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 AF366264G3X9P9 502 aa9.62□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Pik3cdO35904 1043 aa9.62□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 ThrbP37242 461 aa9.62□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Pcyt1aP49586 367 aa9.62□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 VegfbP49766 207 aa9.62□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 InhbcP55104 352 aa9.62□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Hcrtr1P58307 416 aa9.62□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Lpcat1Q3TFD2 534 aa9.62□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Brsk1Q5RJI5 778 aa9.62□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Zfp78Q5U406 512 aa9.62□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Eif2b4Q61749 524 aa9.62□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Rexo4Q6PAQ4 432 aaKnown RBP9.62□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Naa50Q6PGB6 169 aaKnown RBP9.62□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Rxfp4Q7TQP4 414 aa9.62□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Olfr366Q7TRY4 309 aa9.62□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Olfr295Q7TS08 309 aa9.62□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Ubp1Q811S7 540 aa9.62□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Gucy1b2Q8BXH3 824 aa9.62□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 RorbQ8R1B8 470 aa9.62□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Slc30a5Q8R4H9 761 aa9.62□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Cant1Q8VCF1 403 aa9.62□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Cryl1Q99KP3 319 aa9.62□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Klhl28Q9CR40 571 aa9.62□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 SgshQ9EQ08 502 aa9.62□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Rai2Q9QVY8 529 aa9.62□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Faap100A2ACJ2 879 aa9.62□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Ttll8A4Q9F1 832 aa9.62□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Eif2b3B1AUN2 452 aaKnown RBP9.62□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 4930444G20RikD3Z741 495 aa9.62□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Vmn2r17E9PYF5 849 aa9.62□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Serpine3E9Q6A2 401 aa9.62□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Zfp938E9Q9G3 579 aa9.62□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Gm8879F6R3J9 157 aa9.62□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Gm8922F6XVS9 199 aa9.62□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Gm8897L7N294 181 aa9.62□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Dmp1O55188 503 aa9.62□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Adra2bP30545 450 aa9.62□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Hrh1P70174 488 aa9.62□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 PrkczQ02956 592 aa9.62□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Pros1Q08761 675 aa9.62□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Tmem151bQ68FE7 561 aa9.62□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Slain1Q68FF7 579 aa9.62□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Trim36Q80WG7 729 aa9.62□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 SynpoQ8CC35 929 aaKnown RBP9.62□□□□□ -0.87
Retrieved 100 of 22,080 RNA–protein pairs in 34.4 ms