RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 PRSS56P0CW18 603 aa9.31□□□□□ -0.92
PHGDH-228ENST00000641847 GP1BBP13224 206 aa9.31□□□□□ -0.92
PHGDH-228ENST00000641847 ITGALP20701 1170 aa9.31□□□□□ -0.92
PHGDH-228ENST00000641847 INHBCP55103 352 aa9.31□□□□□ -0.92
PHGDH-228ENST00000641847 DCDC1P59894 354 aa9.31□□□□□ -0.92
PHGDH-228ENST00000641847 PPP2CBP62714 309 aa9.31□□□□□ -0.92
PHGDH-228ENST00000641847 RPS21P63220 83 aaKnown RBP9.31□□□□□ -0.92
PHGDH-228ENST00000641847 PPP2CAP67775 309 aa9.31□□□□□ -0.92
PHGDH-228ENST00000641847 XIAPP98170 497 aa9.31□□□□□ -0.92
PHGDH-228ENST00000641847 MGAT5Q09328 741 aa9.31□□□□□ -0.92
PHGDH-228ENST00000641847 IFFO1Q0D2I5 559 aa9.31□□□□□ -0.92
PHGDH-228ENST00000641847 NAB1Q13506 487 aa9.31□□□□□ -0.92
PHGDH-228ENST00000641847 THOC5Q13769 683 aaKnown RBP9.31□□□□□ -0.92
PHGDH-228ENST00000641847 ZNF284Q2VY69 593 aa9.31□□□□□ -0.92
PHGDH-228ENST00000641847 HSP90AA5PQ58FG0 334 aa9.31□□□□□ -0.92
PHGDH-228ENST00000641847 ZNF470Q6ECI4 717 aa9.31□□□□□ -0.92
PHGDH-228ENST00000641847 LAYNQ6UX15 382 aa9.31□□□□□ -0.92
PHGDH-228ENST00000641847 KDM7AQ6ZMT4 941 aa9.31□□□□□ -0.92
PHGDH-228ENST00000641847 Q6ZVL8 140 aa9.31□□□□□ -0.92
PHGDH-228ENST00000641847 ZNF765Q7L2R6 523 aa9.31□□□□□ -0.92
PHGDH-228ENST00000641847 PTAR1Q7Z6K3 402 aaPredicted RBP9.31□□□□□ -0.92
PHGDH-228ENST00000641847 TECPR1Q7Z6L1 1165 aa9.31□□□□□ -0.92
PHGDH-228ENST00000641847 CTAGE3PQ8IX95 158 aa9.31□□□□□ -0.92
PHGDH-228ENST00000641847 RAVER1Q8IY67 606 aaKnown RBP9.31□□□□□ -0.92
PHGDH-228ENST00000641847 NRSN1Q8IZ57 195 aa9.31□□□□□ -0.92
PHGDH-228ENST00000641847 CBARPQ8N350 705 aaPredicted RBP9.31□□□□□ -0.92
PHGDH-228ENST00000641847 PPM1NQ8N819 430 aa9.31□□□□□ -0.92
PHGDH-228ENST00000641847 OR2T34Q8NGX1 318 aa9.31□□□□□ -0.92
PHGDH-228ENST00000641847 OR4L1Q8NH43 312 aa9.31□□□□□ -0.92
PHGDH-228ENST00000641847 OR2W6PQ8NHA6 318 aa9.31□□□□□ -0.92
PHGDH-228ENST00000641847 CDKL2Q92772 493 aa9.31□□□□□ -0.92
PHGDH-228ENST00000641847 SCAMP4Q969E2 229 aa9.31□□□□□ -0.92
PHGDH-228ENST00000641847 AP2M1Q96CW1 435 aa9.31□□□□□ -0.92
PHGDH-228ENST00000641847 HIC2Q96JB3 615 aa9.31□□□□□ -0.92
PHGDH-228ENST00000641847 PLEKHG4BQ96PX9 1271 aa9.31□□□□□ -0.92
PHGDH-228ENST00000641847 CYTH2Q99418 400 aa9.31□□□□□ -0.92
PHGDH-228ENST00000641847 C19orf43Q9BQ61 176 aa9.31□□□□□ -0.92
PHGDH-228ENST00000641847 TRIM4Q9C037 500 aa9.31□□□□□ -0.92
PHGDH-228ENST00000641847 ABCG8Q9H221 673 aa9.31□□□□□ -0.92
PHGDH-228ENST00000641847 KDM4CQ9H3R0 1056 aa9.31□□□□□ -0.92
PHGDH-228ENST00000641847 ACSS3Q9H6R3 686 aa9.31□□□□□ -0.92
PHGDH-228ENST00000641847 IL26Q9NPH9 171 aa9.31□□□□□ -0.92
PHGDH-228ENST00000641847 AASDHPPTQ9NRN7 309 aa9.31□□□□□ -0.92
PHGDH-228ENST00000641847 RAD18Q9NS91 495 aa9.31□□□□□ -0.92
PHGDH-228ENST00000641847 IARS2Q9NSE4 1012 aaKnown RBP9.31□□□□□ -0.92
PHGDH-228ENST00000641847 CATSPERZQ9NTU4 200 aa9.31□□□□□ -0.92
PHGDH-228ENST00000641847 ZFATQ9P243 1243 aa9.31□□□□□ -0.92
PHGDH-228ENST00000641847 MARCH4Q9P2E8 410 aaPredicted RBP9.31□□□□□ -0.92
PHGDH-228ENST00000641847 ANKMY1Q9P2S6 941 aa9.31□□□□□ -0.92
PHGDH-228ENST00000641847 NFKBIL1Q9UBC1 381 aaPredicted RBP9.31□□□□□ -0.92
PHGDH-228ENST00000641847 RABGEF1Q9UJ41 708 aa9.31□□□□□ -0.92
PHGDH-228ENST00000641847 APPL1Q9UKG1 709 aa9.31□□□□□ -0.92
PHGDH-228ENST00000641847 ZFR2Q9UPR6 939 aaKnown RBP9.31□□□□□ -0.92
PHGDH-228ENST00000641847 PLAAQ9Y263 795 aa9.31□□□□□ -0.92
PHGDH-228ENST00000641847 SLC30A1Q9Y6M5 507 aa9.31□□□□□ -0.92
PHGDH-228ENST00000641847 AHCTF1Q8WYP5 2266 aa9.3□□□□□ -0.92
PHGDH-228ENST00000641847 TBC1D3DA0A087WVF3 549 aa9.3□□□□□ -0.92
PHGDH-228ENST00000641847 TBC1D3IA0A087WXS9 549 aa9.3□□□□□ -0.92
PHGDH-228ENST00000641847 TBC1D3EA0A087X179 549 aa9.3□□□□□ -0.92
PHGDH-228ENST00000641847 TBC1D3KA0A087X1G2 549 aa9.3□□□□□ -0.92
PHGDH-228ENST00000641847 TBC1D3FA6NER0 549 aaPredicted RBP9.3□□□□□ -0.92
PHGDH-228ENST00000641847 CXorf49A8MYA2 514 aaPredicted RBP9.3□□□□□ -0.92
PHGDH-228ENST00000641847 TBC1D3LB9A6J9 549 aa9.3□□□□□ -0.92
PHGDH-228ENST00000641847 GAPDHSO14556 408 aaPredicted RBP9.3□□□□□ -0.92
PHGDH-228ENST00000641847 GPR39O43194 453 aa9.3□□□□□ -0.92
PHGDH-228ENST00000641847 PIAS1O75925 651 aa9.3□□□□□ -0.92
PHGDH-228ENST00000641847 DXOO77932 396 aaKnown RBP9.3□□□□□ -0.92
PHGDH-228ENST00000641847 MT-CO3P00414 261 aa9.3□□□□□ -0.92
PHGDH-228ENST00000641847 PCCBP05166 539 aa9.3□□□□□ -0.92
PHGDH-228ENST00000641847 IVLP07476 585 aa9.3□□□□□ -0.92
PHGDH-228ENST00000641847 F7P08709 466 aaPredicted RBP9.3□□□□□ -0.92
PHGDH-228ENST00000641847 TBC1D3HP0C7X1 549 aa9.3□□□□□ -0.92
PHGDH-228ENST00000641847 SFTPCP11686 197 aa9.3□□□□□ -0.92
PHGDH-228ENST00000641847 RBMS1P29558 406 aaKnown RBP9.3□□□□□ -0.92
PHGDH-228ENST00000641847 MAT2AP31153 395 aaKnown RBP9.3□□□□□ -0.92
PHGDH-228ENST00000641847 FOXN2P32314 431 aa9.3□□□□□ -0.92
PHGDH-228ENST00000641847 SLC1A2P43004 574 aa9.3□□□□□ -0.92
PHGDH-228ENST00000641847 GABREP78334 506 aa9.3□□□□□ -0.92
PHGDH-228ENST00000641847 INSM1Q01101 510 aaPredicted RBP9.3□□□□□ -0.92
PHGDH-228ENST00000641847 CACNG1Q06432 222 aa9.3□□□□□ -0.92
PHGDH-228ENST00000641847 STAT4Q14765 748 aa9.3□□□□□ -0.92
PHGDH-228ENST00000641847 CHRNA6Q15825 494 aa9.3□□□□□ -0.92
PHGDH-228ENST00000641847 KBTBD12Q3ZCT8 623 aa9.3□□□□□ -0.92
PHGDH-228ENST00000641847 TMEM259Q4ZIN3 620 aa9.3□□□□□ -0.92
PHGDH-228ENST00000641847 FASTKD1Q53R41 847 aaKnown RBP9.3□□□□□ -0.92
PHGDH-228ENST00000641847 ZRANB3Q5FWF4 1079 aa9.3□□□□□ -0.92
PHGDH-228ENST00000641847 PRAMEF14Q5SWL7 426 aa9.3□□□□□ -0.92
PHGDH-228ENST00000641847 HENMT1Q5T8I9 393 aaKnown RBP9.3□□□□□ -0.92
PHGDH-228ENST00000641847 TBC1D3GQ6DHY5 549 aa9.3□□□□□ -0.92
PHGDH-228ENST00000641847 TBC1D3CQ6IPX1 549 aa9.3□□□□□ -0.92
PHGDH-228ENST00000641847 NEPROQ6NW34 567 aa9.3□□□□□ -0.92
PHGDH-228ENST00000641847 NEK5Q6P3R8 708 aa9.3□□□□□ -0.92
PHGDH-228ENST00000641847 CCDC81Q6ZN84 652 aa9.3□□□□□ -0.92
PHGDH-228ENST00000641847 MARK2Q7KZI7 788 aaKnown RBP9.3□□□□□ -0.92
PHGDH-228ENST00000641847 HDXQ7Z353 690 aa9.3□□□□□ -0.92
PHGDH-228ENST00000641847 TRIM69Q86WT6 500 aa9.3□□□□□ -0.92
PHGDH-228ENST00000641847 HORMAD1Q86X24 394 aa9.3□□□□□ -0.92
PHGDH-228ENST00000641847 CNTN4Q8IWV2 1026 aa9.3□□□□□ -0.92
PHGDH-228ENST00000641847 TBC1D3Q8IZP1 549 aaPredicted RBP9.3□□□□□ -0.92
PHGDH-228ENST00000641847 GPR26Q8NDV2 337 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms