RNA–Protein interactions for RNA: ENST00000640306.1

HNRNPU-228, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 2,917 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-228ENST00000640306 GPRIN3Q6ZVF9 776 aa16.36■□□□□ 0.21
HNRNPU-228ENST00000640306 TMBIM1Q969X1 311 aa16.36■□□□□ 0.21
HNRNPU-228ENST00000640306 SMURF2Q9HAU4 748 aa16.36■□□□□ 0.21
HNRNPU-228ENST00000640306 GPBP1L1Q9HC44 474 aaPredicted RBP16.36■□□□□ 0.21
HNRNPU-228ENST00000640306 EXD2Q9NVH0 621 aa16.36■□□□□ 0.21
HNRNPU-228ENST00000640306 HACD3Q9P035 362 aa16.36■□□□□ 0.21
HNRNPU-228ENST00000640306 LCHNA4D1U4 455 aa16.36■□□□□ 0.21
HNRNPU-228ENST00000640306 SNAP91O60641 907 aa16.36■□□□□ 0.21
HNRNPU-228ENST00000640306 UROSP10746 265 aa16.36■□□□□ 0.21
HNRNPU-228ENST00000640306 ERVPABLB-1P60509 514 aa16.36■□□□□ 0.21
HNRNPU-228ENST00000640306 NRG1Q02297 640 aaPredicted RBP16.36■□□□□ 0.21
HNRNPU-228ENST00000640306 ATP6AP1LQ52LC2 224 aa16.36■□□□□ 0.21
HNRNPU-228ENST00000640306 TRPV1Q8NER1 839 aa16.36■□□□□ 0.21
HNRNPU-228ENST00000640306 TADA1Q96BN2 335 aa16.36■□□□□ 0.21
HNRNPU-228ENST00000640306 CCDC97Q96F63 343 aaPredicted RBP16.36■□□□□ 0.21
HNRNPU-228ENST00000640306 TBCDQ9BTW9 1192 aa16.36■□□□□ 0.21
HNRNPU-228ENST00000640306 INTS10Q9NVR2 710 aaKnown RBP16.36■□□□□ 0.21
HNRNPU-228ENST00000640306 DOCK4Q8N1I0 1966 aa16.36■□□□□ 0.21
HNRNPU-228ENST00000640306 TRIM64CA6NLI5 447 aa16.35■□□□□ 0.21
HNRNPU-228ENST00000640306 PRAMEF11O60813 436 aa16.35■□□□□ 0.21
HNRNPU-228ENST00000640306 CAPN1P07384 714 aa16.35■□□□□ 0.21
HNRNPU-228ENST00000640306 RPS24P62847 133 aaKnown RBP16.35■□□□□ 0.21
HNRNPU-228ENST00000640306 GNA12Q03113 381 aa16.35■□□□□ 0.21
HNRNPU-228ENST00000640306 NR6A1Q15406 480 aa16.35■□□□□ 0.21
HNRNPU-228ENST00000640306 TAS2R42Q7RTR8 314 aa16.35■□□□□ 0.21
HNRNPU-228ENST00000640306 SPATA19Q7Z5L4 167 aa16.35■□□□□ 0.21
HNRNPU-228ENST00000640306 GPSM1Q86YR5 675 aa16.35■□□□□ 0.21
HNRNPU-228ENST00000640306 FAM126BQ8IXS8 530 aa16.35■□□□□ 0.21
HNRNPU-228ENST00000640306 SFRP1Q8N474 314 aa16.35■□□□□ 0.21
HNRNPU-228ENST00000640306 SMYD1Q8NB12 490 aa16.35■□□□□ 0.21
HNRNPU-228ENST00000640306 OR10Q1Q8NGQ4 319 aa16.35■□□□□ 0.21
HNRNPU-228ENST00000640306 GPR150Q8NGU9 434 aa16.35■□□□□ 0.21
HNRNPU-228ENST00000640306 TBC1D15Q8TC07 691 aa16.35■□□□□ 0.21
HNRNPU-228ENST00000640306 METTL6Q8TCB7 284 aa16.35■□□□□ 0.21
HNRNPU-228ENST00000640306 GIPC2Q8TF65 315 aa16.35■□□□□ 0.21
HNRNPU-228ENST00000640306 TANKQ92844 425 aa16.35■□□□□ 0.21
HNRNPU-228ENST00000640306 NTN4Q9HB63 628 aa16.35■□□□□ 0.21
HNRNPU-228ENST00000640306 TRMT6Q9UJA5 497 aaKnown RBP16.35■□□□□ 0.21
HNRNPU-228ENST00000640306 POLR3HQ9Y535 204 aaPredicted RBP16.35■□□□□ 0.21
HNRNPU-228ENST00000640306 H0Y858 1186 aa16.35■□□□□ 0.21
HNRNPU-228ENST00000640306 NDST3O95803 873 aa16.35■□□□□ 0.21
HNRNPU-228ENST00000640306 GUCA1CO95843 209 aa16.35■□□□□ 0.21
HNRNPU-228ENST00000640306 OGNP20774 298 aaKnown RBP16.35■□□□□ 0.21
HNRNPU-228ENST00000640306 HMOX2P30519 316 aa16.35■□□□□ 0.21
HNRNPU-228ENST00000640306 ERVK-8P63133 956 aa16.35■□□□□ 0.21
HNRNPU-228ENST00000640306 ZNF554Q86TJ5 538 aa16.35■□□□□ 0.21
HNRNPU-228ENST00000640306 SERINC5Q86VE9 423 aa16.35■□□□□ 0.21
HNRNPU-228ENST00000640306 BDH2Q9BUT1 245 aa16.35■□□□□ 0.21
HNRNPU-228ENST00000640306 CARS2Q9HA77 564 aaKnown RBP16.35■□□□□ 0.21
HNRNPU-228ENST00000640306 CD320Q9NPF0 282 aa16.35■□□□□ 0.21
HNRNPU-228ENST00000640306 TLR9Q9NR96 1032 aa16.35■□□□□ 0.21
HNRNPU-228ENST00000640306 E5RI56 91 aa16.35■□□□□ 0.21
HNRNPU-228ENST00000640306 MAN1A2O60476 641 aa16.35■□□□□ 0.21
HNRNPU-228ENST00000640306 ZBTB11O95625 1053 aaPredicted RBP16.35■□□□□ 0.21
HNRNPU-228ENST00000640306 MC4RP32245 332 aa16.35■□□□□ 0.21
HNRNPU-228ENST00000640306 TPD52P55327 224 aaPredicted RBP16.35■□□□□ 0.21
HNRNPU-228ENST00000640306 PRKG2Q13237 762 aa16.35■□□□□ 0.21
HNRNPU-228ENST00000640306 BFSP2Q13515 415 aa16.35■□□□□ 0.21
HNRNPU-228ENST00000640306 TYSND1Q2T9J0 566 aa16.35■□□□□ 0.21
HNRNPU-228ENST00000640306 IRAK1BP1Q5VVH5 260 aa16.35■□□□□ 0.21
HNRNPU-228ENST00000640306 C16orf87Q6PH81 154 aa16.35■□□□□ 0.21
HNRNPU-228ENST00000640306 DHRS4L2Q6PKH6 230 aa16.35■□□□□ 0.21
HNRNPU-228ENST00000640306 PTRH1Q86Y79 214 aaKnown RBP16.35■□□□□ 0.21
HNRNPU-228ENST00000640306 OR56A4Q8NGH8 313 aa16.35■□□□□ 0.21
HNRNPU-228ENST00000640306 ITFG1Q8TB96 612 aa16.35■□□□□ 0.21
HNRNPU-228ENST00000640306 ERLEC1Q96DZ1 483 aa16.35■□□□□ 0.21
HNRNPU-228ENST00000640306 IGLV3-10A0A075B6K4 115 aa16.34■□□□□ 0.21
HNRNPU-228ENST00000640306 SYCE1LA8MT33 242 aa16.34■□□□□ 0.21
HNRNPU-228ENST00000640306 FFAR3O14843 346 aa16.34■□□□□ 0.21
HNRNPU-228ENST00000640306 GPR42O15529 346 aa16.34■□□□□ 0.21
HNRNPU-228ENST00000640306 PRR35P0CG20 571 aa16.34■□□□□ 0.21
HNRNPU-228ENST00000640306 ZNF140P52738 457 aaPredicted RBP16.34■□□□□ 0.21
HNRNPU-228ENST00000640306 ARSFP54793 590 aa16.34■□□□□ 0.21
HNRNPU-228ENST00000640306 ADARB1P78563 741 aaKnown RBP16.34■□□□□ 0.21
HNRNPU-228ENST00000640306 FOXM1Q08050 763 aa16.34■□□□□ 0.21
HNRNPU-228ENST00000640306 MGAT3Q09327 533 aa16.34■□□□□ 0.21
HNRNPU-228ENST00000640306 PARP15Q460N3 678 aa16.34■□□□□ 0.21
HNRNPU-228ENST00000640306 AASDHQ4L235 1098 aaPredicted RBP16.34■□□□□ 0.21
HNRNPU-228ENST00000640306 SGO1Q5FBB7 561 aa16.34■□□□□ 0.21
HNRNPU-228ENST00000640306 XKR7Q5GH72 579 aa16.34■□□□□ 0.21
HNRNPU-228ENST00000640306 ENPP6Q6UWR7 440 aa16.34■□□□□ 0.21
HNRNPU-228ENST00000640306 ADAMTS16Q8TE57 1224 aa16.34■□□□□ 0.21
HNRNPU-228ENST00000640306 OSCP1Q8WVF1 389 aa16.34■□□□□ 0.21
HNRNPU-228ENST00000640306 C17orf80Q9BSJ5 609 aa16.34■□□□□ 0.21
HNRNPU-228ENST00000640306 DGCR6LQ9BY27 220 aa16.34■□□□□ 0.21
HNRNPU-228ENST00000640306 LRRC3Q9BY71 257 aa16.34■□□□□ 0.21
HNRNPU-228ENST00000640306 CRISPLD1Q9H336 500 aa16.34■□□□□ 0.21
HNRNPU-228ENST00000640306 FBXO44Q9H4M3 255 aa16.34■□□□□ 0.21
HNRNPU-228ENST00000640306 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.34■□□□□ 0.214e-8■□□□□ 9
HNRNPU-228ENST00000640306 PCDHGA11Q9Y5H2 935 aa16.34■□□□□ 0.21
HNRNPU-228ENST00000640306 NLRC5Q86WI3 1866 aa16.34■□□□□ 0.21
HNRNPU-228ENST00000640306 PTPRDP23468 1912 aa16.34■□□□□ 0.21
HNRNPU-228ENST00000640306 GOLGA8CPA6NN73 597 aa16.34■□□□□ 0.21
HNRNPU-228ENST00000640306 E2F3O00716 465 aa16.34■□□□□ 0.21
HNRNPU-228ENST00000640306 DFNA5O60443 496 aa16.34■□□□□ 0.21
HNRNPU-228ENST00000640306 NOL3O60936 208 aaKnown RBP16.34■□□□□ 0.21
HNRNPU-228ENST00000640306 ZNF623O75123 536 aa16.34■□□□□ 0.21
HNRNPU-228ENST00000640306 VPS4BO75351 444 aa16.34■□□□□ 0.21
HNRNPU-228ENST00000640306 TSPAN12O95859 305 aa16.34■□□□□ 0.21
HNRNPU-228ENST00000640306 AKR1A1P14550 325 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms