RNA–Protein interactions for RNA: ENST00000640076.1

SCARB2-220, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 1,991 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-220ENST00000640076 HTRA2O43464 458 aaPredicted RBP7.95□□□□□ -1.14
SCARB2-220ENST00000640076 PIGNO95427 931 aa7.95□□□□□ -1.14
SCARB2-220ENST00000640076 POP4O95707 220 aaKnown RBP7.95□□□□□ -1.14
SCARB2-220ENST00000640076 NDST3O95803 873 aa7.95□□□□□ -1.14
SCARB2-220ENST00000640076 EGFP01133 1207 aa7.95□□□□□ -1.14
SCARB2-220ENST00000640076 THBS1P07996 1170 aa7.95□□□□□ -1.14
SCARB2-220ENST00000640076 PDHA1P08559 390 aa7.95□□□□□ -1.14
SCARB2-220ENST00000640076 HLA-EP13747 358 aa7.95□□□□□ -1.14
SCARB2-220ENST00000640076 HNRNPLP14866 589 aaKnown RBP eCLIP7.95□□□□□ -1.14
SCARB2-220ENST00000640076 TSHRP16473 764 aa7.95□□□□□ -1.14
SCARB2-220ENST00000640076 TPH1P17752 444 aa7.95□□□□□ -1.14
SCARB2-220ENST00000640076 HLA-DPA1P20036 260 aa7.95□□□□□ -1.14
SCARB2-220ENST00000640076 DRD1P21728 446 aa7.95□□□□□ -1.14
SCARB2-220ENST00000640076 CA4P22748 312 aa7.95□□□□□ -1.14
SCARB2-220ENST00000640076 PRKCHP24723 683 aa7.95□□□□□ -1.14
SCARB2-220ENST00000640076 MGAT1P26572 445 aa7.95□□□□□ -1.14
SCARB2-220ENST00000640076 ATP6V1E1P36543 226 aa7.95□□□□□ -1.14
SCARB2-220ENST00000640076 IL12RB1P42701 662 aa7.95□□□□□ -1.14
SCARB2-220ENST00000640076 MAGEA4P43358 317 aa7.95□□□□□ -1.14
SCARB2-220ENST00000640076 TNNT3P45378 269 aaPredicted RBP7.95□□□□□ -1.14
SCARB2-220ENST00000640076 PMS2P54278 862 aa7.95□□□□□ -1.14
SCARB2-220ENST00000640076 CRADDP78560 199 aa7.95□□□□□ -1.14
SCARB2-220ENST00000640076 BCL2L1Q07817 233 aa7.95□□□□□ -1.14
SCARB2-220ENST00000640076 ENPP2Q13822 863 aa7.95□□□□□ -1.14
SCARB2-220ENST00000640076 UBAP2LQ14157 1087 aaKnown RBP7.95□□□□□ -1.14
SCARB2-220ENST00000640076 SLC44A4Q53GD3 710 aa7.95□□□□□ -1.14
SCARB2-220ENST00000640076 SIRPB2Q5JXA9 342 aa7.95□□□□□ -1.14
SCARB2-220ENST00000640076 CERCAMQ5T4B2 595 aa7.95□□□□□ -1.14
SCARB2-220ENST00000640076 TPRG1Q6ZUI0 275 aa7.95□□□□□ -1.14
SCARB2-220ENST00000640076 TRMT10CQ7L0Y3 403 aaKnown RBP7.95□□□□□ -1.14
SCARB2-220ENST00000640076 IGDCC3Q8IVU1 814 aa7.95□□□□□ -1.14
SCARB2-220ENST00000640076 ZBED8Q8IZ13 594 aa7.95□□□□□ -1.14
SCARB2-220ENST00000640076 CISD2Q8N5K1 135 aaKnown RBP7.95□□□□□ -1.14
SCARB2-220ENST00000640076 SLC25A41Q8N5S1 370 aa7.95□□□□□ -1.14
SCARB2-220ENST00000640076 SNIP1Q8TAD8 396 aaKnown RBP7.95□□□□□ -1.14
SCARB2-220ENST00000640076 LRRC39Q96DD0 335 aa7.95□□□□□ -1.14
SCARB2-220ENST00000640076 C9orf72Q96LT7 481 aa7.95□□□□□ -1.14
SCARB2-220ENST00000640076 TUBGCP5Q96RT8 1024 aa7.95□□□□□ -1.14
SCARB2-220ENST00000640076 ACOX2Q99424 681 aa7.95□□□□□ -1.14
SCARB2-220ENST00000640076 CPEB1Q9BZB8 566 aaKnown RBP7.95□□□□□ -1.14
SCARB2-220ENST00000640076 CDC42EP4Q9H3Q1 356 aaKnown RBP7.95□□□□□ -1.14
SCARB2-220ENST00000640076 SEMA4AQ9H3S1 761 aa7.95□□□□□ -1.14
SCARB2-220ENST00000640076 ZDHHC4Q9NPG8 344 aa7.95□□□□□ -1.14
SCARB2-220ENST00000640076 CAMSAP3Q9P1Y5 1249 aaPredicted RBP7.95□□□□□ -1.14
SCARB2-220ENST00000640076 SORCS3Q9UPU3 1222 aa7.95□□□□□ -1.14
SCARB2-220ENST00000640076 MYLKQ15746 1914 aa7.95□□□□□ -1.14
SCARB2-220ENST00000640076 EDDM13A0A1B0GTR0 161 aa7.95□□□□□ -1.14
SCARB2-220ENST00000640076 F5H0A9 414 aaPredicted RBP7.95□□□□□ -1.14
SCARB2-220ENST00000640076 NPC1O15118 1278 aa7.95□□□□□ -1.14
SCARB2-220ENST00000640076 GSTA4O15217 222 aa7.95□□□□□ -1.14
SCARB2-220ENST00000640076 PGLSO95336 258 aa7.95□□□□□ -1.14
SCARB2-220ENST00000640076 SLC4A1P02730 911 aa7.95□□□□□ -1.14
SCARB2-220ENST00000640076 FGF1P05230 155 aa7.95□□□□□ -1.14
SCARB2-220ENST00000640076 CTSBP07858 339 aa7.95□□□□□ -1.14
SCARB2-220ENST00000640076 BMP1P13497 986 aa7.95□□□□□ -1.14
SCARB2-220ENST00000640076 SERPINA4P29622 427 aa7.95□□□□□ -1.14
SCARB2-220ENST00000640076 HSD17B3P37058 310 aa7.95□□□□□ -1.14
SCARB2-220ENST00000640076 ELK3P41970 407 aa7.95□□□□□ -1.14
SCARB2-220ENST00000640076 NPY2RP49146 381 aa7.95□□□□□ -1.14
SCARB2-220ENST00000640076 MAN2A2P49641 1150 aa7.95□□□□□ -1.14
SCARB2-220ENST00000640076 MRPS35P82673 323 aaKnown RBP7.95□□□□□ -1.14
SCARB2-220ENST00000640076 RAD51Q06609 339 aa7.95□□□□□ -1.14
SCARB2-220ENST00000640076 GRSF1Q12849 480 aaKnown RBP eCLIP7.95□□□□□ -1.14
SCARB2-220ENST00000640076 MSLNQ13421 630 aaPredicted RBP7.95□□□□□ -1.14
SCARB2-220ENST00000640076 GALNT3Q14435 633 aa7.95□□□□□ -1.14
SCARB2-220ENST00000640076 TESK1Q15569 626 aa7.95□□□□□ -1.14
SCARB2-220ENST00000640076 MLF2Q15773 248 aaPredicted RBP7.95□□□□□ -1.14
SCARB2-220ENST00000640076 UAP1Q16222 522 aaPredicted RBP7.95□□□□□ -1.14
SCARB2-220ENST00000640076 NKG7Q16617 165 aa7.95□□□□□ -1.14
SCARB2-220ENST00000640076 KYNUQ16719 465 aa7.95□□□□□ -1.14
SCARB2-220ENST00000640076 UBAP2Q5T6F2 1119 aaKnown RBP7.95□□□□□ -1.14
SCARB2-220ENST00000640076 C9orf64Q5T6V5 341 aa7.95□□□□□ -1.14
SCARB2-220ENST00000640076 ARMC12Q5T9G4 340 aa7.95□□□□□ -1.14
SCARB2-220ENST00000640076 FAM205BPQ63HN1 556 aa7.95□□□□□ -1.14
SCARB2-220ENST00000640076 FRMD7Q6ZUT3 714 aa7.95□□□□□ -1.14
SCARB2-220ENST00000640076 FBXO36Q8NEA4 188 aa7.95□□□□□ -1.14
SCARB2-220ENST00000640076 LILRB1Q8NHL6 650 aaPredicted RBP7.95□□□□□ -1.14
SCARB2-220ENST00000640076 PYROXD1Q8WU10 500 aa7.95□□□□□ -1.14
SCARB2-220ENST00000640076 PDCD6IPQ8WUM4 868 aaKnown RBP7.95□□□□□ -1.14
SCARB2-220ENST00000640076 ECHDC3Q96DC8 303 aa7.95□□□□□ -1.14
SCARB2-220ENST00000640076 ZNF641Q96N77 438 aaPredicted RBP7.95□□□□□ -1.14
SCARB2-220ENST00000640076 ELF4Q99607 663 aaPredicted RBP7.95□□□□□ -1.14
SCARB2-220ENST00000640076 EBNA1BP2Q99848 306 aaKnown RBP7.95□□□□□ -1.14
SCARB2-220ENST00000640076 HEPHQ9BQS7 1158 aa7.95□□□□□ -1.14
SCARB2-220ENST00000640076 SORBS1Q9BX66 1292 aaKnown RBP7.95□□□□□ -1.14
SCARB2-220ENST00000640076 ADGRE3Q9BY15 652 aa7.95□□□□□ -1.14
SCARB2-220ENST00000640076 IL22Q9GZX6 179 aa7.95□□□□□ -1.14
SCARB2-220ENST00000640076 EPB41L4BQ9H329 900 aa7.95□□□□□ -1.14
SCARB2-220ENST00000640076 PABPC3Q9H361 631 aaKnown RBP7.95□□□□□ -1.14
SCARB2-220ENST00000640076 ZDHHC6Q9H6R6 413 aa7.95□□□□□ -1.14
SCARB2-220ENST00000640076 SYBUQ9NX95 663 aa7.95□□□□□ -1.14
SCARB2-220ENST00000640076 NINJ2Q9NZG7 142 aa7.95□□□□□ -1.14
SCARB2-220ENST00000640076 BFARQ9NZS9 450 aa7.95□□□□□ -1.14
SCARB2-220ENST00000640076 CHMP2BQ9UQN3 213 aa7.95□□□□□ -1.14
SCARB2-220ENST00000640076 MAD1L1Q9Y6D9 718 aa7.95□□□□□ -1.14
SCARB2-220ENST00000640076 STON1Q9Y6Q2 735 aa7.95□□□□□ -1.14
SCARB2-220ENST00000640076 A0A0C4DFX4 3053 aa7.94□□□□□ -1.14
SCARB2-220ENST00000640076 POM121BA6NF01 834 aa7.94□□□□□ -1.14
SCARB2-220ENST00000640076 ANKRD66B4E2M5 251 aa7.94□□□□□ -1.14
SCARB2-220ENST00000640076 SIN3BO75182 1162 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms