RNA–Protein interactions for RNA: ENST00000640027.1

MED17-222, Transcript of mediator complex subunit 17, human

TSL 5

Gene MED17, Length 4,569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MED17-222	ENST00000640027	ENPP3	O14638	875 aa		13.78	□□□□□ -0.2
MED17-222	ENST00000640027	TSPAN1	O60635	241 aa		13.78	□□□□□ -0.2
MED17-222	ENST00000640027	USP2	O75604	605 aa	Predicted RBP	13.78	□□□□□ -0.2
MED17-222	ENST00000640027	PGM3	O95394	542 aa		13.78	□□□□□ -0.2
MED17-222	ENST00000640027	CLDN9	O95484	217 aa		13.78	□□□□□ -0.2
MED17-222	ENST00000640027	ALOX5	P09917	674 aa		13.78	□□□□□ -0.2
MED17-222	ENST00000640027	MSX2	P35548	267 aa	Predicted RBP	13.78	□□□□□ -0.2
MED17-222	ENST00000640027	PRMT2	P55345	433 aa		13.78	□□□□□ -0.2
MED17-222	ENST00000640027	OC90	Q02509	493 aa	Predicted RBP	13.78	□□□□□ -0.2
MED17-222	ENST00000640027	TRAP1	Q12931	704 aa	Known RBP	13.78	□□□□□ -0.2
MED17-222	ENST00000640027	FBXO48	Q5FWF7	155 aa		13.78	□□□□□ -0.2
MED17-222	ENST00000640027	PPP2R2D	Q66LE6	453 aa		13.78	□□□□□ -0.2
MED17-222	ENST00000640027	TRABD2A	Q86V40	505 aa		13.78	□□□□□ -0.2
MED17-222	ENST00000640027	POC5	Q8NA72	575 aa		13.78	□□□□□ -0.2
MED17-222	ENST00000640027	IRGQ	Q8WZA9	623 aa		13.78	□□□□□ -0.2
MED17-222	ENST00000640027	KLK6	Q92876	244 aa		13.78	□□□□□ -0.2
MED17-222	ENST00000640027	MFSD3	Q96ES6	412 aa		13.78	□□□□□ -0.2
MED17-222	ENST00000640027	KLHL32	Q96NJ5	620 aa		13.78	□□□□□ -0.2
MED17-222	ENST00000640027	PDZD7	Q9H5P4	517 aa		13.78	□□□□□ -0.2
MED17-222	ENST00000640027	PNPLA8	Q9NP80	782 aa		13.78	□□□□□ -0.2
MED17-222	ENST00000640027	CCNB1IP1	Q9NPC3	277 aa		13.78	□□□□□ -0.2
MED17-222	ENST00000640027	MAGEL2	Q9UJ55	1249 aa		13.78	□□□□□ -0.2
MED17-222	ENST00000640027	HNRNPD	Q14103	355 aa	Known RBP	13.78	□□□□□ -0.2
MED17-222	ENST00000640027	IL23R	Q5VWK5	629 aa		13.78	□□□□□ -0.2
MED17-222	ENST00000640027	TMEM220	Q6QAJ8	160 aa		13.78	□□□□□ -0.2
MED17-222	ENST00000640027	ZBTB46	Q86UZ6	589 aa		13.78	□□□□□ -0.2
MED17-222	ENST00000640027	FBXW2	Q9UKT8	454 aa		13.78	□□□□□ -0.2
MED17-222	ENST00000640027	ARL5C	A6NH57	179 aa		13.78	□□□□□ -0.2
MED17-222	ENST00000640027	FPGT	O14772	594 aa		13.78	□□□□□ -0.2
MED17-222	ENST00000640027	COL6A2	P12110	1019 aa		13.78	□□□□□ -0.2
MED17-222	ENST00000640027	GNS	P15586	552 aa		13.78	□□□□□ -0.2
MED17-222	ENST00000640027	PDX1	P52945	283 aa		13.78	□□□□□ -0.2
MED17-222	ENST00000640027	CRY2	Q49AN0	593 aa		13.78	□□□□□ -0.2
MED17-222	ENST00000640027	IQCF2	Q8IXL9	164 aa		13.78	□□□□□ -0.2
MED17-222	ENST00000640027	PTCD2	Q8WV60	388 aa	Known RBP	13.78	□□□□□ -0.2
MED17-222	ENST00000640027	CKLF	Q9UBR5	152 aa		13.78	□□□□□ -0.2
MED17-222	ENST00000640027	FCF1	Q9Y324	198 aa	Known RBP	13.78	□□□□□ -0.2
MED17-222	ENST00000640027	FAM237A	A0A1B0GTK4	181 aa		13.77	□□□□□ -0.2
MED17-222	ENST00000640027	RSL1D1	O76021	490 aa	Known RBP	13.77	□□□□□ -0.2
MED17-222	ENST00000640027	NUDT17	P0C025	328 aa		13.77	□□□□□ -0.2
MED17-222	ENST00000640027	ARHGDIB	P52566	201 aa		13.77	□□□□□ -0.2
MED17-222	ENST00000640027	RBBP4	Q09028	425 aa		13.77	□□□□□ -0.2
MED17-222	ENST00000640027	MED27	Q6P2C8	311 aa		13.77	□□□□□ -0.2
MED17-222	ENST00000640027	PRSS55	Q6UWB4	352 aa	Predicted RBP	13.77	□□□□□ -0.2
MED17-222	ENST00000640027	NXNL1	Q96CM4	212 aa		13.77	□□□□□ -0.2
MED17-222	ENST00000640027	ZFP37	Q9Y6Q3	630 aa	Predicted RBP	13.77	□□□□□ -0.2
MED17-222	ENST00000640027	DYTN	A2CJ06	578 aa		13.77	□□□□□ -0.21
MED17-222	ENST00000640027	CPSF4L	A6NMK7	179 aa	Known RBP	13.77	□□□□□ -0.21
MED17-222	ENST00000640027	CA12	O43570	354 aa		13.77	□□□□□ -0.21
MED17-222	ENST00000640027	RGS20	O76081	388 aa		13.77	□□□□□ -0.21
MED17-222	ENST00000640027	BPGM	P07738	259 aa		13.77	□□□□□ -0.21
MED17-222	ENST00000640027	CCNC	P24863	283 aa		13.77	□□□□□ -0.21
MED17-222	ENST00000640027	PLA2G16	P53816	162 aa		13.77	□□□□□ -0.21
MED17-222	ENST00000640027	PRKCZ	Q05513	592 aa		13.77	□□□□□ -0.21
MED17-222	ENST00000640027	SNAPC1	Q16533	368 aa		13.77	□□□□□ -0.21
MED17-222	ENST00000640027	PYDC2	Q56P42	97 aa		13.77	□□□□□ -0.21
MED17-222	ENST00000640027	PLEKHG4	Q58EX7	1191 aa		13.77	□□□□□ -0.21
MED17-222	ENST00000640027	NET1	Q7Z628	596 aa	Predicted RBP	13.77	□□□□□ -0.21
MED17-222	ENST00000640027	TAC4	Q86UU9	113 aa		13.77	□□□□□ -0.21
MED17-222	ENST00000640027	XYLT1	Q86Y38	959 aa		13.77	□□□□□ -0.21
MED17-222	ENST00000640027	PARP8	Q8N3A8	854 aa		13.77	□□□□□ -0.21
MED17-222	ENST00000640027	SLC38A4	Q969I6	547 aa		13.77	□□□□□ -0.21
MED17-222	ENST00000640027	ART5	Q96L15	291 aa		13.77	□□□□□ -0.21
MED17-222	ENST00000640027	PCDHB18P	Q96TA0	734 aa		13.77	□□□□□ -0.21
MED17-222	ENST00000640027	NOL11	Q9H8H0	719 aa	Known RBP	13.77	□□□□□ -0.21
MED17-222	ENST00000640027	MBD2	Q9UBB5	411 aa		13.77	□□□□□ -0.21
MED17-222	ENST00000640027	PRPF19	Q9UMS4	504 aa	Known RBP	13.77	□□□□□ -0.21
MED17-222	ENST00000640027	AFDN	P55196	1824 aa	Known RBP	13.77	□□□□□ -0.21
MED17-222	ENST00000640027	BTNL10	A8MVZ5	291 aa		13.77	□□□□□ -0.21
MED17-222	ENST00000640027	CASK	O14936	926 aa		13.77	□□□□□ -0.21
MED17-222	ENST00000640027	INSIG1	O15503	277 aa		13.77	□□□□□ -0.21
MED17-222	ENST00000640027	KERA	O60938	352 aa		13.77	□□□□□ -0.21
MED17-222	ENST00000640027	TRIM3	O75382	744 aa	Predicted RBP	13.77	□□□□□ -0.21
MED17-222	ENST00000640027	HEPACAM	Q14CZ8	416 aa		13.77	□□□□□ -0.21
MED17-222	ENST00000640027	AMZ1	Q400G9	498 aa		13.77	□□□□□ -0.21
MED17-222	ENST00000640027	PIK3R6	Q5UE93	754 aa		13.77	□□□□□ -0.21
MED17-222	ENST00000640027	C11orf65	Q8NCR3	313 aa		13.77	□□□□□ -0.21
MED17-222	ENST00000640027	AP3S1	Q92572	193 aa		13.77	□□□□□ -0.21
MED17-222	ENST00000640027	CLCC1	Q96S66	551 aa		13.77	□□□□□ -0.21
MED17-222	ENST00000640027	HNRNPAB	Q99729	332 aa	Known RBP	13.77	□□□□□ -0.21
MED17-222	ENST00000640027	FAM192A	Q9GZU8	254 aa		13.77	□□□□□ -0.21
MED17-222	ENST00000640027	CDH19	Q9H159	772 aa		13.77	□□□□□ -0.21
MED17-222	ENST00000640027	SRMS	Q9H3Y6	488 aa		13.77	□□□□□ -0.21
MED17-222	ENST00000640027	TRMT13	Q9NUP7	481 aa	Known RBP	13.77	□□□□□ -0.21
MED17-222	ENST00000640027	KHDRBS3	O75525	346 aa	Known RBP	13.76	□□□□□ -0.21
MED17-222	ENST00000640027	KRT36	O76013	467 aa		13.76	□□□□□ -0.21
MED17-222	ENST00000640027	KCNA5	P22460	613 aa		13.76	□□□□□ -0.21
MED17-222	ENST00000640027	MPST	P25325	297 aa		13.76	□□□□□ -0.21
MED17-222	ENST00000640027	HTR7	P34969	479 aa		13.76	□□□□□ -0.21
MED17-222	ENST00000640027	TGFBR2	P37173	567 aa		13.76	□□□□□ -0.21
MED17-222	ENST00000640027	CCR3	P51677	355 aa		13.76	□□□□□ -0.21
MED17-222	ENST00000640027	DCTN2	Q13561	401 aa	Known RBP	13.76	□□□□□ -0.21
MED17-222	ENST00000640027	PERM1	Q5SV97	790 aa		13.76	□□□□□ -0.21
MED17-222	ENST00000640027	TMEM164	Q5U3C3	297 aa		13.76	□□□□□ -0.21
MED17-222	ENST00000640027	JAZF1	Q86VZ6	243 aa		13.76	□□□□□ -0.21
MED17-222	ENST00000640027	CIR1	Q86X95	450 aa	Predicted RBP	13.76	□□□□□ -0.21
MED17-222	ENST00000640027	TBC1D21	Q8IYX1	336 aa		13.76	□□□□□ -0.21
MED17-222	ENST00000640027	TTC29	Q8NA56	475 aa	Predicted RBP	13.76	□□□□□ -0.21
MED17-222	ENST00000640027	SMPDL3B	Q92485	455 aa		13.76	□□□□□ -0.21
MED17-222	ENST00000640027	NPAS2	Q99743	824 aa		13.76	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms