RNA–Protein interactions for RNA: ENST00000639561.1

ATRIP-208, Transcript of ATR interacting protein, humanhuman

TSL 2

Gene ATRIP, Length 2,376 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRIP-208ENST00000639561 TTPAP49638 278 aa13.72□□□□□ -0.21
ATRIP-208ENST00000639561 SH3BP2P78314 561 aa13.72□□□□□ -0.21
ATRIP-208ENST00000639561 SATB1Q01826 763 aa13.72□□□□□ -0.21
ATRIP-208ENST00000639561 MPP7Q5T2T1 576 aa13.72□□□□□ -0.21
ATRIP-208ENST00000639561 ARMC12Q5T9G4 340 aa13.72□□□□□ -0.21
ATRIP-208ENST00000639561 ASCL5Q7RTU5 278 aa13.72□□□□□ -0.21
ATRIP-208ENST00000639561 EFCAB3Q8N7B9 438 aa13.72□□□□□ -0.21
ATRIP-208ENST00000639561 CFAP61Q8NHU2 1237 aa13.72□□□□□ -0.21
ATRIP-208ENST00000639561 NRG4Q8WWG1 115 aa13.72□□□□□ -0.21
ATRIP-208ENST00000639561 VOPP1Q96AW1 172 aa13.72□□□□□ -0.21
ATRIP-208ENST00000639561 CCDC97Q96F63 343 aaPredicted RBP13.72□□□□□ -0.21
ATRIP-208ENST00000639561 NSUN5Q96P11 429 aaKnown RBP13.72□□□□□ -0.21
ATRIP-208ENST00000639561 SYTL2Q9HCH5 934 aa13.72□□□□□ -0.21
ATRIP-208ENST00000639561 STX18Q9P2W9 335 aaKnown RBP13.72□□□□□ -0.21
ATRIP-208ENST00000639561 TRAF6Q9Y4K3 522 aa13.72□□□□□ -0.21
ATRIP-208ENST00000639561 CDC7O00311 574 aa13.71□□□□□ -0.21
ATRIP-208ENST00000639561 AIM2O14862 343 aa13.71□□□□□ -0.21
ATRIP-208ENST00000639561 SLC22A2O15244 555 aa13.71□□□□□ -0.21
ATRIP-208ENST00000639561 KERAO60938 352 aa13.71□□□□□ -0.21
ATRIP-208ENST00000639561 THRAP10827 490 aa13.71□□□□□ -0.21
ATRIP-208ENST00000639561 PKMP14618 531 aaKnown RBP13.71□□□□□ -0.21
ATRIP-208ENST00000639561 HMGCLP35914 325 aa13.71□□□□□ -0.21
ATRIP-208ENST00000639561 NUDT2P50583 147 aa13.71□□□□□ -0.21
ATRIP-208ENST00000639561 TSNQ15631 228 aaKnown RBP13.71□□□□□ -0.21
ATRIP-208ENST00000639561 PLEKHG6Q3KR16 790 aa13.71□□□□□ -0.21
ATRIP-208ENST00000639561 MPPE1Q53F39 396 aa13.71□□□□□ -0.21
ATRIP-208ENST00000639561 ZNF687Q8N1G0 1237 aa13.71□□□□□ -0.21
ATRIP-208ENST00000639561 SIDT2Q8NBJ9 832 aaKnown RBP13.71□□□□□ -0.21
ATRIP-208ENST00000639561 CEP70Q8NHQ1 597 aa13.71□□□□□ -0.21
ATRIP-208ENST00000639561 ACDQ96AP0 544 aa13.71□□□□□ -0.21
ATRIP-208ENST00000639561 CCDC124Q96CT7 223 aaKnown RBP13.71□□□□□ -0.21
ATRIP-208ENST00000639561 FAR2Q96K12 515 aa13.71□□□□□ -0.21
ATRIP-208ENST00000639561 TNKS2Q9H2K2 1166 aa13.71□□□□□ -0.21
ATRIP-208ENST00000639561 MAGEE1Q9HCI5 957 aa13.71□□□□□ -0.21
ATRIP-208ENST00000639561 TDP1Q9NUW8 608 aa13.71□□□□□ -0.21
ATRIP-208ENST00000639561 SCN8AQ9UQD0 1980 aa13.71□□□□□ -0.21
ATRIP-208ENST00000639561 CACNA1IQ9P0X4 2223 aa13.71□□□□□ -0.22
ATRIP-208ENST00000639561 GAPDHSO14556 408 aaPredicted RBP13.71□□□□□ -0.22
ATRIP-208ENST00000639561 CDK14O94921 469 aa13.71□□□□□ -0.22
ATRIP-208ENST00000639561 PFKLP17858 780 aa13.71□□□□□ -0.22
ATRIP-208ENST00000639561 ADSLP30566 484 aaPredicted RBP13.71□□□□□ -0.22
ATRIP-208ENST00000639561 CA5AP35218 305 aa13.71□□□□□ -0.22
ATRIP-208ENST00000639561 INHBCP55103 352 aa13.71□□□□□ -0.22
ATRIP-208ENST00000639561 TBL3Q12788 808 aaKnown RBP13.71□□□□□ -0.22
ATRIP-208ENST00000639561 CYLC2Q14093 348 aaPredicted RBP13.71□□□□□ -0.22
ATRIP-208ENST00000639561 ITPRIPL2Q3MIP1 535 aa13.71□□□□□ -0.22
ATRIP-208ENST00000639561 UGT3A2Q3SY77 523 aa13.71□□□□□ -0.22
ATRIP-208ENST00000639561 FBXO48Q5FWF7 155 aa13.71□□□□□ -0.22
ATRIP-208ENST00000639561 MAMSTRQ6ZN01 415 aa13.71□□□□□ -0.22
ATRIP-208ENST00000639561 CHSY3Q70JA7 882 aa13.71□□□□□ -0.22
ATRIP-208ENST00000639561 MYLK4Q86YV6 388 aaPredicted RBP13.71□□□□□ -0.22
ATRIP-208ENST00000639561 HPS6Q86YV9 775 aa13.71□□□□□ -0.22
ATRIP-208ENST00000639561 RP9Q8TA86 221 aaKnown RBP13.71□□□□□ -0.22
ATRIP-208ENST00000639561 FIBINQ8TAL6 211 aa13.71□□□□□ -0.22
ATRIP-208ENST00000639561 HMGCLL1Q8TB92 370 aa13.71□□□□□ -0.22
ATRIP-208ENST00000639561 CD200R1Q8TD46 325 aa13.71□□□□□ -0.22
ATRIP-208ENST00000639561 FUBP1Q96AE4 644 aaKnown RBP13.71□□□□□ -0.22
ATRIP-208ENST00000639561 RPL10LQ96L21 214 aaKnown RBP13.71□□□□□ -0.22
ATRIP-208ENST00000639561 LRRC3BQ96PB8 259 aa13.71□□□□□ -0.22
ATRIP-208ENST00000639561 GPR63Q9BZJ6 419 aa13.71□□□□□ -0.22
ATRIP-208ENST00000639561 PRMT8Q9NR22 394 aaPredicted RBP13.71□□□□□ -0.22
ATRIP-208ENST00000639561 STOML1Q9UBI4 398 aa13.71□□□□□ -0.22
ATRIP-208ENST00000639561 VPS9D1Q9Y2B5 631 aa13.71□□□□□ -0.22
ATRIP-208ENST00000639561 A0A1B0GTL3 188 aa13.7□□□□□ -0.22
ATRIP-208ENST00000639561 NPEPPSL1A6NEC2 478 aa13.7□□□□□ -0.22
ATRIP-208ENST00000639561 IQCF5A8MTL0 148 aa13.7□□□□□ -0.22
ATRIP-208ENST00000639561 HTRA2O43464 458 aaPredicted RBP13.7□□□□□ -0.22
ATRIP-208ENST00000639561 GFAPP14136 432 aa13.7□□□□□ -0.22
ATRIP-208ENST00000639561 CTHP32929 405 aa13.7□□□□□ -0.22
ATRIP-208ENST00000639561 CTSOP43234 321 aaPredicted RBP13.7□□□□□ -0.22
ATRIP-208ENST00000639561 SLC34A1Q06495 639 aa13.7□□□□□ -0.22
ATRIP-208ENST00000639561 RAD51Q06609 339 aa13.7□□□□□ -0.22
ATRIP-208ENST00000639561 FZD5Q13467 585 aa13.7□□□□□ -0.22
ATRIP-208ENST00000639561 CCDC6Q16204 474 aa13.7□□□□□ -0.22
ATRIP-208ENST00000639561 DGKKQ5KSL6 1271 aa13.7□□□□□ -0.22
ATRIP-208ENST00000639561 ZSWIM9Q86XI8 627 aa13.7□□□□□ -0.22
ATRIP-208ENST00000639561 MAML2Q8IZL2 1156 aaPredicted RBP13.7□□□□□ -0.22
ATRIP-208ENST00000639561 STAG3L4Q8TBR4 150 aa13.7□□□□□ -0.22
ATRIP-208ENST00000639561 NAT14Q8WUY8 206 aa13.7□□□□□ -0.22
ATRIP-208ENST00000639561 USP13Q92995 863 aaPredicted RBP13.7□□□□□ -0.22
ATRIP-208ENST00000639561 RCN3Q96D15 328 aa13.7□□□□□ -0.22
ATRIP-208ENST00000639561 LMLNQ96KR4 655 aa13.7□□□□□ -0.22
ATRIP-208ENST00000639561 FAM126AQ9BYI3 521 aaPredicted RBP13.7□□□□□ -0.22
ATRIP-208ENST00000639561 LMAN1LQ9HAT1 526 aa13.7□□□□□ -0.22
ATRIP-208ENST00000639561 KIAA1522Q9P206 1035 aaPredicted RBP13.7□□□□□ -0.22
ATRIP-208ENST00000639561 RNF112Q9ULX5 631 aa13.7□□□□□ -0.22
ATRIP-208ENST00000639561 ZNF510Q9Y2H8 683 aa13.7□□□□□ -0.22
ATRIP-208ENST00000639561 PKP3Q9Y446 797 aa13.7□□□□□ -0.22
ATRIP-208ENST00000639561 R4GN57 208 aa13.7□□□□□ -0.22
ATRIP-208ENST00000639561 F5P12259 2224 aa13.7□□□□□ -0.22
ATRIP-208ENST00000639561 A0A0J9YYE9 177 aa13.69□□□□□ -0.22
ATRIP-208ENST00000639561 SUPT3HB4E1H0 165 aa13.69□□□□□ -0.22
ATRIP-208ENST00000639561 SUPT3HO75486 399 aa13.69□□□□□ -0.22
ATRIP-208ENST00000639561 TRBC1P01850 177 aa13.69□□□□□ -0.22
ATRIP-208ENST00000639561 HLA-FP30511 346 aa13.69□□□□□ -0.22
ATRIP-208ENST00000639561 STK19P49842 368 aaPredicted RBP13.69□□□□□ -0.22
ATRIP-208ENST00000639561 ADARP55265 1226 aaKnown RBP13.69□□□□□ -0.22
ATRIP-208ENST00000639561 FOXA1P55317 472 aa13.69□□□□□ -0.22
ATRIP-208ENST00000639561 ATP6V0D1P61421 351 aa13.69□□□□□ -0.22
ATRIP-208ENST00000639561 CSTF1Q05048 431 aaKnown RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms