RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 CAPRIN2Q6IMN6 1127 aaKnown RBP21.25■□□□□ 0.99
CLN6-224ENST00000638076 SBSNQ6UWP8 590 aa21.25■□□□□ 0.99
CLN6-224ENST00000638076 EFL1Q7Z2Z2 1120 aaKnown RBP21.25■□□□□ 0.99
CLN6-224ENST00000638076 ADAMTSL2Q86TH1 951 aa21.25■□□□□ 0.99
CLN6-224ENST00000638076 TSPAN33Q86UF1 283 aa21.25■□□□□ 0.99
CLN6-224ENST00000638076 OR52B6Q8NGF0 335 aa21.25■□□□□ 0.99
CLN6-224ENST00000638076 CDK15Q96Q40 435 aa21.25■□□□□ 0.99
CLN6-224ENST00000638076 ACOX2Q99424 681 aa21.25■□□□□ 0.99
CLN6-224ENST00000638076 BEGAINQ9BUH8 593 aa21.25■□□□□ 0.99
CLN6-224ENST00000638076 VCXQ9H320 206 aa21.25■□□□□ 0.99
CLN6-224ENST00000638076 CRLS1Q9UJA2 301 aa21.25■□□□□ 0.99
CLN6-224ENST00000638076 RIMS3Q9UJD0 308 aa21.25■□□□□ 0.99
CLN6-224ENST00000638076 CCL26Q9Y258 94 aa21.25■□□□□ 0.99
CLN6-224ENST00000638076 NDUFAF1Q9Y375 327 aa21.25■□□□□ 0.99
CLN6-224ENST00000638076 ANKRD12Q6UB98 2062 aa21.25■□□□□ 0.99
CLN6-224ENST00000638076 LINC00271P0C7V0 271 aa21.24■□□□□ 0.99
CLN6-224ENST00000638076 PRR35P0CG20 571 aa21.24■□□□□ 0.99
CLN6-224ENST00000638076 HLA-FP30511 346 aa21.24■□□□□ 0.99
CLN6-224ENST00000638076 SLC7A2P52569 658 aa21.24■□□□□ 0.99
CLN6-224ENST00000638076 CHRNA6Q15825 494 aa21.24■□□□□ 0.99
CLN6-224ENST00000638076 C18orf21Q32NC0 220 aaPredicted RBP21.24■□□□□ 0.99
CLN6-224ENST00000638076 SAMD4BQ5PRF9 694 aaKnown RBP21.24■□□□□ 0.99
CLN6-224ENST00000638076 OGFOD2Q6N063 350 aa21.24■□□□□ 0.99
CLN6-224ENST00000638076 LRCH3Q96II8 777 aa21.24■□□□□ 0.99
CLN6-224ENST00000638076 ZNF382Q96SR6 550 aa21.24■□□□□ 0.99
CLN6-224ENST00000638076 C19orf43Q9BQ61 176 aa21.24■□□□□ 0.99
CLN6-224ENST00000638076 MAP10Q9P2G4 905 aa21.24■□□□□ 0.99
CLN6-224ENST00000638076 DTNAQ9Y4J8 743 aa21.24■□□□□ 0.99
CLN6-224ENST00000638076 TRBV5-4A0A0C4DH59 114 aa21.24■□□□□ 0.99
CLN6-224ENST00000638076 PRSS51A0A1B0GVH4 220 aa21.24■□□□□ 0.99
CLN6-224ENST00000638076 NPIPB15A6NHN6 443 aaPredicted RBP21.24■□□□□ 0.99
CLN6-224ENST00000638076 SLC25A14O95258 325 aaPredicted RBP21.24■□□□□ 0.99
CLN6-224ENST00000638076 TRIM16O95361 564 aa21.24■□□□□ 0.99
CLN6-224ENST00000638076 UQCRBP14927 111 aa21.24■□□□□ 0.99
CLN6-224ENST00000638076 SPAM1P38567 509 aa21.24■□□□□ 0.99
CLN6-224ENST00000638076 CCR2P41597 374 aa21.24■□□□□ 0.99
CLN6-224ENST00000638076 SNRPD1P62314 119 aaKnown RBP21.24■□□□□ 0.99
CLN6-224ENST00000638076 XKR7Q5GH72 579 aa21.24■□□□□ 0.99
CLN6-224ENST00000638076 LILRA2Q8N149 483 aa21.24■□□□□ 0.99
CLN6-224ENST00000638076 CDYL2Q8N8U2 506 aa21.24■□□□□ 0.99
CLN6-224ENST00000638076 ICA1LQ8NDH6 482 aa21.24■□□□□ 0.99
CLN6-224ENST00000638076 LMLNQ96KR4 655 aa21.24■□□□□ 0.99
CLN6-224ENST00000638076 NOL11Q9H8H0 719 aaKnown RBP21.24■□□□□ 0.99
CLN6-224ENST00000638076 IL1RL2Q9HB29 575 aa21.24■□□□□ 0.99
CLN6-224ENST00000638076 HCFC1R1Q9NWW0 138 aa21.24■□□□□ 0.99
CLN6-224ENST00000638076 GPR45Q9Y5Y3 372 aa21.24■□□□□ 0.99
CLN6-224ENST00000638076 ANGPT2O15123 496 aa21.23■□□□□ 0.99
CLN6-224ENST00000638076 RARS2Q5T160 578 aaKnown RBP21.23■□□□□ 0.99
CLN6-224ENST00000638076 SPATA19Q7Z5L4 167 aa21.23■□□□□ 0.99
CLN6-224ENST00000638076 TMEM199Q8N511 208 aa21.23■□□□□ 0.99
CLN6-224ENST00000638076 VOPP1Q96AW1 172 aa21.23■□□□□ 0.99
CLN6-224ENST00000638076 SLC45A3Q96JT2 553 aa21.23■□□□□ 0.99
CLN6-224ENST00000638076 C11orf49Q9H6J7 331 aa21.23■□□□□ 0.99
CLN6-224ENST00000638076 HECAQ9UBI9 543 aaPredicted RBP21.23■□□□□ 0.99
CLN6-224ENST00000638076 ZBBXA8MT70 800 aa21.23■□□□□ 0.99
CLN6-224ENST00000638076 BAIAP3O94812 1187 aa21.23■□□□□ 0.99
CLN6-224ENST00000638076 ARL1P40616 181 aaPredicted RBP21.23■□□□□ 0.99
CLN6-224ENST00000638076 ERVPABLB-1P60509 514 aa21.23■□□□□ 0.99
CLN6-224ENST00000638076 TRAP1Q12931 704 aaKnown RBP21.23■□□□□ 0.99
CLN6-224ENST00000638076 OR2T11Q8NH01 316 aa21.23■□□□□ 0.99
CLN6-224ENST00000638076 ATP6V1E2Q96A05 226 aa21.23■□□□□ 0.99
CLN6-224ENST00000638076 PKP2Q99959 881 aa21.23■□□□□ 0.99
CLN6-224ENST00000638076 FFAR2O15552 330 aa21.22■□□□□ 0.99
CLN6-224ENST00000638076 DNAJA2O60884 412 aa21.22■□□□□ 0.99
CLN6-224ENST00000638076 LYNP07948 512 aa21.22■□□□□ 0.99
CLN6-224ENST00000638076 RGS4P49798 205 aa21.22■□□□□ 0.99
CLN6-224ENST00000638076 PCBP2Q15366 365 aaKnown RBP eCLIP21.22■□□□□ 0.99
CLN6-224ENST00000638076 MYLK3Q32MK0 819 aa21.22■□□□□ 0.99
CLN6-224ENST00000638076 FUT11Q495W5 492 aa21.22■□□□□ 0.99
CLN6-224ENST00000638076 LYPLAL1Q5VWZ2 237 aa21.22■□□□□ 0.99
CLN6-224ENST00000638076 GRAMD4Q6IC98 578 aa21.22■□□□□ 0.99
CLN6-224ENST00000638076 LETMD1Q6P1Q0 360 aa21.22■□□□□ 0.99
CLN6-224ENST00000638076 CRTC1Q6UUV9 634 aa21.22■□□□□ 0.99
CLN6-224ENST00000638076 TMEM126BQ8IUX1 230 aa21.22■□□□□ 0.99
CLN6-224ENST00000638076 MYO1HQ8N1T3 1032 aa21.22■□□□□ 0.99
CLN6-224ENST00000638076 TLR9Q9NR96 1032 aa21.22■□□□□ 0.99
CLN6-224ENST00000638076 TNPO3Q9Y5L0 923 aaKnown RBP21.22■□□□□ 0.99
CLN6-224ENST00000638076 RNASEH1O60930 286 aaKnown RBP21.22■□□□□ 0.99
CLN6-224ENST00000638076 S100BP04271 92 aaPredicted RBP21.22■□□□□ 0.99
CLN6-224ENST00000638076 CHRM1P11229 460 aaPredicted RBP21.22■□□□□ 0.99
CLN6-224ENST00000638076 MED21Q13503 144 aa21.22■□□□□ 0.99
CLN6-224ENST00000638076 C6orf10Q5SRN2 563 aa21.22■□□□□ 0.99
CLN6-224ENST00000638076 IL23RQ5VWK5 629 aa21.22■□□□□ 0.99
CLN6-224ENST00000638076 C22orf39Q6P5X5 142 aa21.22■□□□□ 0.99
CLN6-224ENST00000638076 BLOC1S3Q6QNY0 202 aa21.22■□□□□ 0.99
CLN6-224ENST00000638076 GOLGA7Q7Z5G4 137 aa21.22■□□□□ 0.99
CLN6-224ENST00000638076 CBARPQ8N350 705 aaPredicted RBP21.22■□□□□ 0.99
CLN6-224ENST00000638076 GPR26Q8NDV2 337 aa21.22■□□□□ 0.99
CLN6-224ENST00000638076 SPDL1Q96EA4 605 aa21.22■□□□□ 0.99
CLN6-224ENST00000638076 DCUN1D1Q96GG9 259 aa21.22■□□□□ 0.99
CLN6-224ENST00000638076 LYSMD1Q96S90 227 aa21.22■□□□□ 0.99
CLN6-224ENST00000638076 GPATCH1Q9BRR8 931 aaKnown RBP21.22■□□□□ 0.99
CLN6-224ENST00000638076 PFDN4Q9NQP4 134 aa21.22■□□□□ 0.99
CLN6-224ENST00000638076 AIG1Q9NVV5 245 aa21.22■□□□□ 0.99
CLN6-224ENST00000638076 HS3ST2Q9Y278 367 aa21.22■□□□□ 0.99
CLN6-224ENST00000638076 SCN8AQ9UQD0 1980 aa21.21■□□□□ 0.99
CLN6-224ENST00000638076 RAD51BO15315 384 aa21.21■□□□□ 0.99
CLN6-224ENST00000638076 GUCA1CO95843 209 aa21.21■□□□□ 0.99
CLN6-224ENST00000638076 C8BP07358 591 aa21.21■□□□□ 0.99
CLN6-224ENST00000638076 VCLP18206 1134 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms