RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 SEPHS1P49903 392 aa18.14■□□□□ 0.49
CLN6-220ENST00000637450 ADCY2Q08462 1091 aa18.14■□□□□ 0.49
CLN6-220ENST00000637450 CDC20Q12834 499 aa18.14■□□□□ 0.49
CLN6-220ENST00000637450 NOMO1Q15155 1222 aa18.14■□□□□ 0.49
CLN6-220ENST00000637450 LLGL1Q15334 1064 aa18.14■□□□□ 0.49
CLN6-220ENST00000637450 ZDHHC20Q5W0Z9 365 aa18.14■□□□□ 0.49
CLN6-220ENST00000637450 KAZNQ674X7 775 aa18.14■□□□□ 0.49
CLN6-220ENST00000637450 SPOCD1Q6ZMY3 1216 aa18.14■□□□□ 0.49
CLN6-220ENST00000637450 GDAP1Q8TB36 358 aa18.14■□□□□ 0.49
CLN6-220ENST00000637450 MRGPRX2Q96LB1 330 aa18.14■□□□□ 0.49
CLN6-220ENST00000637450 ANP32EQ9BTT0 268 aa18.14■□□□□ 0.49
CLN6-220ENST00000637450 IL17CQ9P0M4 197 aa18.14■□□□□ 0.49
CLN6-220ENST00000637450 EPHA6Q9UF33 1036 aa18.14■□□□□ 0.49
CLN6-220ENST00000637450 WDR37Q9Y2I8 494 aa18.14■□□□□ 0.49
CLN6-220ENST00000637450 ALG6Q9Y672 507 aa18.14■□□□□ 0.49
CLN6-220ENST00000637450 HECTD1Q9ULT8 2610 aa18.14■□□□□ 0.49
CLN6-220ENST00000637450 MTSS1O43312 755 aa18.13■□□□□ 0.49
CLN6-220ENST00000637450 PSTPIP1O43586 416 aa18.13■□□□□ 0.49
CLN6-220ENST00000637450 KIF1CO43896 1103 aaKnown RBP18.13■□□□□ 0.49
CLN6-220ENST00000637450 VCLP18206 1134 aa18.13■□□□□ 0.49
CLN6-220ENST00000637450 CAPZBP47756 277 aa18.13■□□□□ 0.49
CLN6-220ENST00000637450 SH3BP2P78314 561 aa18.13■□□□□ 0.49
CLN6-220ENST00000637450 MC1RQ01726 317 aa18.13■□□□□ 0.49
CLN6-220ENST00000637450 GTF2H3Q13889 308 aa18.13■□□□□ 0.49
CLN6-220ENST00000637450 GPR18Q14330 331 aa18.13■□□□□ 0.49
CLN6-220ENST00000637450 IL11RAQ14626 422 aa18.13■□□□□ 0.49
CLN6-220ENST00000637450 CRTC2Q53ET0 693 aaPredicted RBP18.13■□□□□ 0.49
CLN6-220ENST00000637450 SIRPB2Q5JXA9 342 aa18.13■□□□□ 0.49
CLN6-220ENST00000637450 PRSS42Q7Z5A4 293 aa18.13■□□□□ 0.49
CLN6-220ENST00000637450 PTRH1Q86Y79 214 aaKnown RBP18.13■□□□□ 0.49
CLN6-220ENST00000637450 TRAPPC5Q8IUR0 188 aa18.13■□□□□ 0.49
CLN6-220ENST00000637450 SLC25A41Q8N5S1 370 aa18.13■□□□□ 0.49
CLN6-220ENST00000637450 KLHL6Q8WZ60 621 aa18.13■□□□□ 0.49
CLN6-220ENST00000637450 STARD8Q92502 1023 aa18.13■□□□□ 0.49
CLN6-220ENST00000637450 RSC1A1Q92681 617 aa18.13■□□□□ 0.49
CLN6-220ENST00000637450 CXorf40BQ96DE9 158 aa18.13■□□□□ 0.49
CLN6-220ENST00000637450 TTC25Q96NG3 672 aa18.13■□□□□ 0.49
CLN6-220ENST00000637450 FCRL5Q96RD9 977 aa18.13■□□□□ 0.49
CLN6-220ENST00000637450 ULBP3Q9BZM4 244 aa18.13■□□□□ 0.49
CLN6-220ENST00000637450 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.13■□□□□ 0.49
CLN6-220ENST00000637450 TRIM10Q9UDY6 481 aa18.13■□□□□ 0.49
CLN6-220ENST00000637450 RPS6KL1Q9Y6S9 549 aa18.13■□□□□ 0.49
CLN6-220ENST00000637450 UGT1A9O60656 530 aa18.12■□□□□ 0.49
CLN6-220ENST00000637450 RASSF9O75901 435 aa18.12■□□□□ 0.49
CLN6-220ENST00000637450 ZNF28P17035 718 aa18.12■□□□□ 0.49
CLN6-220ENST00000637450 UGT1A6P19224 532 aa18.12■□□□□ 0.49
CLN6-220ENST00000637450 UGT1A1P22309 533 aa18.12■□□□□ 0.49
CLN6-220ENST00000637450 UGT1A4P22310 534 aa18.12■□□□□ 0.49
CLN6-220ENST00000637450 F8A1P23610 371 aa18.12■□□□□ 0.49
CLN6-220ENST00000637450 OAS2P29728 719 aaKnown RBP18.12■□□□□ 0.49
CLN6-220ENST00000637450 SPAM1P38567 509 aa18.12■□□□□ 0.49
CLN6-220ENST00000637450 CHRNA4P43681 627 aa18.12■□□□□ 0.49
CLN6-220ENST00000637450 HADHBP55084 474 aaKnown RBP18.12■□□□□ 0.49
CLN6-220ENST00000637450 SLC1A5Q15758 541 aa18.12■□□□□ 0.49
CLN6-220ENST00000637450 CHRNA6Q15825 494 aa18.12■□□□□ 0.49
CLN6-220ENST00000637450 TFDP3Q5H9I0 405 aa18.12■□□□□ 0.49
CLN6-220ENST00000637450 C6orf15Q6UXA7 325 aaPredicted RBP18.12■□□□□ 0.49
CLN6-220ENST00000637450 PID1Q7Z2X4 250 aa18.12■□□□□ 0.49
CLN6-220ENST00000637450 ZC3H18Q86VM9 953 aaKnown RBP18.12■□□□□ 0.49
CLN6-220ENST00000637450 CNGA4Q8IV77 575 aa18.12■□□□□ 0.49
CLN6-220ENST00000637450 ZNF567Q8N184 647 aa18.12■□□□□ 0.49
CLN6-220ENST00000637450 APOBEC4Q8WW27 367 aaKnown RBP18.12■□□□□ 0.49
CLN6-220ENST00000637450 P3H4Q92791 437 aa18.12■□□□□ 0.49
CLN6-220ENST00000637450 ZDHHC12Q96GR4 267 aa18.12■□□□□ 0.49
CLN6-220ENST00000637450 OXNAD1Q96HP4 312 aaPredicted RBP18.12■□□□□ 0.49
CLN6-220ENST00000637450 OR6C1Q96RD1 312 aa18.12■□□□□ 0.49
CLN6-220ENST00000637450 VAT1Q99536 393 aa18.12■□□□□ 0.49
CLN6-220ENST00000637450 RAB33BQ9H082 229 aa18.12■□□□□ 0.49
CLN6-220ENST00000637450 UGT1A7Q9HAW7 530 aa18.12■□□□□ 0.49
CLN6-220ENST00000637450 UGT1A10Q9HAW8 530 aa18.12■□□□□ 0.49
CLN6-220ENST00000637450 UGT1A8Q9HAW9 530 aa18.12■□□□□ 0.49
CLN6-220ENST00000637450 HACD3Q9P035 362 aa18.12■□□□□ 0.49
CLN6-220ENST00000637450 KLHL8Q9P2G9 620 aaPredicted RBP18.12■□□□□ 0.49
CLN6-220ENST00000637450 DNMT3AQ9Y6K1 912 aaPredicted RBP18.12■□□□□ 0.49
CLN6-220ENST00000637450 AKR1B15C9JRZ8 316 aaPredicted RBP18.11■□□□□ 0.49
CLN6-220ENST00000637450 ARHGAP6O43182 974 aa18.11■□□□□ 0.49
CLN6-220ENST00000637450 POP7O75817 140 aaKnown RBP18.11■□□□□ 0.49
CLN6-220ENST00000637450 ZRANB2O95218 330 aaKnown RBP eCLIP18.11■□□□□ 0.49
CLN6-220ENST00000637450 FGF5P12034 268 aa18.11■□□□□ 0.49
CLN6-220ENST00000637450 TCN2P20062 427 aa18.11■□□□□ 0.49
CLN6-220ENST00000637450 CA5AP35218 305 aa18.11■□□□□ 0.49
CLN6-220ENST00000637450 TNNT3P45378 269 aaPredicted RBP18.11■□□□□ 0.49
CLN6-220ENST00000637450 TLE1Q04724 770 aa18.11■□□□□ 0.49
CLN6-220ENST00000637450 DMPKQ09013 629 aa18.11■□□□□ 0.49
CLN6-220ENST00000637450 TBX2Q13207 712 aaPredicted RBP18.11■□□□□ 0.49
CLN6-220ENST00000637450 SKOR2Q2VWA4 1001 aaPredicted RBP18.11■□□□□ 0.49
CLN6-220ENST00000637450 DEFB109BQ30KR1 87 aa18.11■□□□□ 0.49
CLN6-220ENST00000637450 LDLRAP1Q5SW96 308 aa18.11■□□□□ 0.49
CLN6-220ENST00000637450 CACHD1Q5VU97 1274 aa18.11■□□□□ 0.49
CLN6-220ENST00000637450 TMEM220Q6QAJ8 160 aa18.11■□□□□ 0.49
CLN6-220ENST00000637450 AMZ2Q86W34 360 aa18.11■□□□□ 0.49
CLN6-220ENST00000637450 KATNAL2Q8IYT4 538 aa18.11■□□□□ 0.49
CLN6-220ENST00000637450 RCOR2Q8IZ40 523 aa18.11■□□□□ 0.49
CLN6-220ENST00000637450 RASGEF1AQ8N9B8 481 aa18.11■□□□□ 0.49
CLN6-220ENST00000637450 DDHD1Q8NEL9 900 aa18.11■□□□□ 0.49
CLN6-220ENST00000637450 SEMA5BQ9P283 1151 aa18.11■□□□□ 0.49
CLN6-220ENST00000637450 MRPS18BQ9Y676 258 aaKnown RBP18.11■□□□□ 0.49
CLN6-220ENST00000637450 hCG_1818297A0A087WSY0 165 aa18.1■□□□□ 0.49
CLN6-220ENST00000637450 GLYATL1P3A0A0U1RQE8 302 aa18.1■□□□□ 0.49
CLN6-220ENST00000637450 GOLGA6L3A6NEY3 463 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms