RNA–Protein interactions for RNA: ENST00000637038.1

SCN1A-214, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 4,268 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-214ENST00000637038 I6L893 689 aaPredicted RBP3.94□□□□□ -1.78
SCN1A-214ENST00000637038 STX16O14662 325 aa3.94□□□□□ -1.78
SCN1A-214ENST00000637038 HCRTO43612 131 aa3.94□□□□□ -1.78
SCN1A-214ENST00000637038 KERAO60938 352 aa3.94□□□□□ -1.78
SCN1A-214ENST00000637038 E2F6O75461 281 aa3.94□□□□□ -1.78
SCN1A-214ENST00000637038 B3GAT3O94766 335 aa3.94□□□□□ -1.78
SCN1A-214ENST00000637038 HPRP00739 348 aa3.94□□□□□ -1.78
SCN1A-214ENST00000637038 EPOP01588 193 aa3.94□□□□□ -1.78
SCN1A-214ENST00000637038 ANXA6P08133 673 aa3.94□□□□□ -1.78
SCN1A-214ENST00000637038 OCM2P0CE71 109 aa3.94□□□□□ -1.78
SCN1A-214ENST00000637038 OCMP0CE72 109 aaPredicted RBP3.94□□□□□ -1.78
SCN1A-214ENST00000637038 CDH1P12830 882 aa3.94□□□□□ -1.78
SCN1A-214ENST00000637038 HOXC13P31276 330 aa3.94□□□□□ -1.78
SCN1A-214ENST00000637038 CTNNB1P35222 781 aa3.94□□□□□ -1.78
SCN1A-214ENST00000637038 ADRA1AP35348 466 aa3.94□□□□□ -1.78
SCN1A-214ENST00000637038 PBX3P40426 434 aa3.94□□□□□ -1.78
SCN1A-214ENST00000637038 ARCN1P48444 511 aaKnown RBP3.94□□□□□ -1.78
SCN1A-214ENST00000637038 MAPKAPK2P49137 400 aa3.94□□□□□ -1.78
SCN1A-214ENST00000637038 RGS4P49798 205 aa3.94□□□□□ -1.78
SCN1A-214ENST00000637038 LIPEQ05469 1076 aa3.94□□□□□ -1.78
SCN1A-214ENST00000637038 IL10RBQ08334 325 aa3.94□□□□□ -1.78
SCN1A-214ENST00000637038 ZNF460Q14592 562 aa3.94□□□□□ -1.78
SCN1A-214ENST00000637038 ANGPT1Q15389 498 aa3.94□□□□□ -1.78
SCN1A-214ENST00000637038 ATP6AP1Q15904 470 aa3.94□□□□□ -1.78
SCN1A-214ENST00000637038 ZNF829Q3KNS6 432 aaPredicted RBP3.94□□□□□ -1.78
SCN1A-214ENST00000637038 PDCD4Q53EL6 469 aaKnown RBP3.94□□□□□ -1.78
SCN1A-214ENST00000637038 MARCH8Q5T0T0 291 aa3.94□□□□□ -1.78
SCN1A-214ENST00000637038 GPR158Q5T848 1215 aa3.94□□□□□ -1.78
SCN1A-214ENST00000637038 ZCCHC8Q6NZY4 707 aaKnown RBP3.94□□□□□ -1.78
SCN1A-214ENST00000637038 NEK10Q6ZWH5 1172 aa3.94□□□□□ -1.78
SCN1A-214ENST00000637038 MON1AQ86VX9 555 aa3.94□□□□□ -1.78
SCN1A-214ENST00000637038 GALNT13Q8IUC8 556 aa3.94□□□□□ -1.78
SCN1A-214ENST00000637038 ZDHHC13Q8IUH4 622 aa3.94□□□□□ -1.78
SCN1A-214ENST00000637038 SVOPLQ8N434 492 aa3.94□□□□□ -1.78
SCN1A-214ENST00000637038 SPATA6LQ8N4H0 392 aa3.94□□□□□ -1.78
SCN1A-214ENST00000637038 SNX31Q8N9S9 440 aa3.94□□□□□ -1.78
SCN1A-214ENST00000637038 MINDY2Q8NBR6 621 aa3.94□□□□□ -1.78
SCN1A-214ENST00000637038 DNAJB8Q8NHS0 232 aa3.94□□□□□ -1.78
SCN1A-214ENST00000637038 ITFG1Q8TB96 612 aa3.94□□□□□ -1.78
SCN1A-214ENST00000637038 BLOC1S5Q8TDH9 187 aa3.94□□□□□ -1.78
SCN1A-214ENST00000637038 CANT1Q8WVQ1 401 aa3.94□□□□□ -1.78
SCN1A-214ENST00000637038 GAB3Q8WWW8 586 aa3.94□□□□□ -1.78
SCN1A-214ENST00000637038 S100ZQ8WXG8 99 aa3.94□□□□□ -1.78
SCN1A-214ENST00000637038 ISOC1Q96CN7 298 aa3.94□□□□□ -1.78
SCN1A-214ENST00000637038 LRRC58Q96CX6 371 aa3.94□□□□□ -1.78
SCN1A-214ENST00000637038 IMP4Q96G21 291 aaKnown RBP3.94□□□□□ -1.78
SCN1A-214ENST00000637038 DNAJC1Q96KC8 554 aaKnown RBP3.94□□□□□ -1.78
SCN1A-214ENST00000637038 MYRFLQ96LU7 910 aa3.94□□□□□ -1.78
SCN1A-214ENST00000637038 ZNF599Q96NL3 588 aa3.94□□□□□ -1.78
SCN1A-214ENST00000637038 GPR78Q96P69 363 aa3.94□□□□□ -1.78
SCN1A-214ENST00000637038 FAM193BQ96PV7 902 aaPredicted RBP3.94□□□□□ -1.78
SCN1A-214ENST00000637038 RBM38Q9H0Z9 239 aaKnown RBP3.94□□□□□ -1.78
SCN1A-214ENST00000637038 ADNPQ9H2P0 1102 aa3.94□□□□□ -1.78
SCN1A-214ENST00000637038 EPS8L2Q9H6S3 715 aa3.94□□□□□ -1.78
SCN1A-214ENST00000637038 AKTIPQ9H8T0 292 aa3.94□□□□□ -1.78
SCN1A-214ENST00000637038 HMG20AQ9NP66 347 aa3.94□□□□□ -1.78
SCN1A-214ENST00000637038 FAM105AQ9NUU6 356 aa3.94□□□□□ -1.78
SCN1A-214ENST00000637038 CD300AQ9UGN4 299 aa3.94□□□□□ -1.78
SCN1A-214ENST00000637038 GNPTGQ9UJJ9 305 aa3.94□□□□□ -1.78
SCN1A-214ENST00000637038 ZNF711Q9Y462 761 aa3.94□□□□□ -1.78
SCN1A-214ENST00000637038 UNC80Q8N2C7 3258 aa3.94□□□□□ -1.78
SCN1A-214ENST00000637038 KIF26AQ9ULI4 1882 aaPredicted RBP3.94□□□□□ -1.78
SCN1A-214ENST00000637038 A0A0J9YVX5 310 aa3.94□□□□□ -1.78
SCN1A-214ENST00000637038 PRORSD1PA6NEY8 169 aa3.94□□□□□ -1.78
SCN1A-214ENST00000637038 LOC730098B7Z3J9 87 aa3.94□□□□□ -1.78
SCN1A-214ENST00000637038 CFAP99D6REC4 459 aa3.94□□□□□ -1.78
SCN1A-214ENST00000637038 PIP5K1BO14986 540 aa3.94□□□□□ -1.78
SCN1A-214ENST00000637038 MAFKO60675 156 aa3.94□□□□□ -1.78
SCN1A-214ENST00000637038 SBK3P0C264 359 aa3.94□□□□□ -1.78
SCN1A-214ENST00000637038 LAG3P18627 525 aa3.94□□□□□ -1.78
SCN1A-214ENST00000637038 ETFBP38117 255 aa3.94□□□□□ -1.78
SCN1A-214ENST00000637038 CCR10P46092 362 aa3.94□□□□□ -1.78
SCN1A-214ENST00000637038 TTPAP49638 278 aa3.94□□□□□ -1.78
SCN1A-214ENST00000637038 TMBIM6P55061 237 aa3.94□□□□□ -1.78
SCN1A-214ENST00000637038 CLCQ05315 142 aa3.94□□□□□ -1.78
SCN1A-214ENST00000637038 LMAN2Q12907 356 aa3.94□□□□□ -1.78
SCN1A-214ENST00000637038 POLD3Q15054 466 aaPredicted RBP3.94□□□□□ -1.78
SCN1A-214ENST00000637038 SLC14A2Q15849 920 aa3.94□□□□□ -1.78
SCN1A-214ENST00000637038 CSRP2Q16527 193 aa3.94□□□□□ -1.78
SCN1A-214ENST00000637038 MOGQ16653 247 aa3.94□□□□□ -1.78
SCN1A-214ENST00000637038 RGS21Q2M5E4 152 aa3.94□□□□□ -1.78
SCN1A-214ENST00000637038 RBM20Q5T481 1227 aaKnown RBP3.94□□□□□ -1.78
SCN1A-214ENST00000637038 ZNF618Q5T7W0 954 aa3.94□□□□□ -1.78
SCN1A-214ENST00000637038 CACHD1Q5VU97 1274 aa3.94□□□□□ -1.78
SCN1A-214ENST00000637038 KANK2Q63ZY3 851 aa3.94□□□□□ -1.78
SCN1A-214ENST00000637038 OGFOD2Q6N063 350 aa3.94□□□□□ -1.78
SCN1A-214ENST00000637038 DHRS4L2Q6PKH6 230 aa3.94□□□□□ -1.78
SCN1A-214ENST00000637038 GPRIN3Q6ZVF9 776 aa3.94□□□□□ -1.78
SCN1A-214ENST00000637038 THAP5Q7Z6K1 395 aa3.94□□□□□ -1.78
SCN1A-214ENST00000637038 SPPL2CQ8IUH8 684 aa3.94□□□□□ -1.78
SCN1A-214ENST00000637038 CMTR2Q8IYT2 770 aaKnown RBP3.94□□□□□ -1.78
SCN1A-214ENST00000637038 UMODL1-AS1Q8N2C9 162 aa3.94□□□□□ -1.78
SCN1A-214ENST00000637038 SMYD1Q8NB12 490 aa3.94□□□□□ -1.78
SCN1A-214ENST00000637038 OR4L1Q8NH43 312 aa3.94□□□□□ -1.78
SCN1A-214ENST00000637038 BHMTQ93088 406 aa3.94□□□□□ -1.78
SCN1A-214ENST00000637038 NCLNQ969V3 563 aa3.94□□□□□ -1.78
SCN1A-214ENST00000637038 MRGPRX2Q96LB1 330 aa3.94□□□□□ -1.78
SCN1A-214ENST00000637038 PPP3R2Q96LZ3 170 aa3.94□□□□□ -1.78
SCN1A-214ENST00000637038 GAD1Q99259 594 aa3.94□□□□□ -1.78
SCN1A-214ENST00000637038 C17orf80Q9BSJ5 609 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms