RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 TMIGD2Q96BF3 282 aa11.41□□□□□ -0.58
CLN6-217ENST00000636964 CCDC124Q96CT7 223 aaKnown RBP11.41□□□□□ -0.58
CLN6-217ENST00000636964 PHF21BQ96EK2 531 aa11.41□□□□□ -0.58
CLN6-217ENST00000636964 UQCC2Q9BRT2 126 aa11.41□□□□□ -0.58
CLN6-217ENST00000636964 BBS2Q9BXC9 721 aa11.41□□□□□ -0.58
CLN6-217ENST00000636964 GPR63Q9BZJ6 419 aa11.41□□□□□ -0.58
CLN6-217ENST00000636964 ALG9Q9H6U8 611 aa11.41□□□□□ -0.58
CLN6-217ENST00000636964 DMTF1Q9Y222 760 aa11.41□□□□□ -0.58
CLN6-217ENST00000636964 WNT6Q9Y6F9 365 aa11.41□□□□□ -0.58
CLN6-217ENST00000636964 KANSL1LA0AUZ9 987 aa11.41□□□□□ -0.58
CLN6-217ENST00000636964 DENRO43583 198 aaKnown RBP11.41□□□□□ -0.58
CLN6-217ENST00000636964 SNX2O60749 519 aa11.41□□□□□ -0.58
CLN6-217ENST00000636964 CLASP2O75122 1294 aaKnown RBP11.41□□□□□ -0.58
CLN6-217ENST00000636964 TRMUO75648 421 aaKnown RBP11.41□□□□□ -0.58
CLN6-217ENST00000636964 APOA4P06727 396 aa11.41□□□□□ -0.58
CLN6-217ENST00000636964 LTA4HP09960 611 aaKnown RBP11.41□□□□□ -0.58
CLN6-217ENST00000636964 TFPTP0C1Z6 253 aa11.41□□□□□ -0.58
CLN6-217ENST00000636964 CCR3P51677 355 aa11.41□□□□□ -0.58
CLN6-217ENST00000636964 TIAL1Q01085 375 aaKnown RBP eCLIP11.41□□□□□ -0.58
CLN6-217ENST00000636964 DNAL1Q4LDG9 190 aa11.41□□□□□ -0.58
CLN6-217ENST00000636964 PITRM1Q5JRX3 1037 aa11.41□□□□□ -0.58
CLN6-217ENST00000636964 ARMC12Q5T9G4 340 aa11.41□□□□□ -0.58
CLN6-217ENST00000636964 GLMNQ92990 594 aa11.41□□□□□ -0.58
CLN6-217ENST00000636964 POMKQ9H5K3 350 aa11.41□□□□□ -0.58
CLN6-217ENST00000636964 TAS2R42Q7RTR8 314 aa11.4□□□□□ -0.58
CLN6-217ENST00000636964 HPS6Q86YV9 775 aa11.4□□□□□ -0.58
CLN6-217ENST00000636964 PHOSPHO2Q8TCD6 241 aa11.4□□□□□ -0.58
CLN6-217ENST00000636964 MAPK15Q8TD08 544 aa11.4□□□□□ -0.58
CLN6-217ENST00000636964 ACDQ96AP0 544 aa11.4□□□□□ -0.58
CLN6-217ENST00000636964 TSPAN17Q96FV3 270 aa11.4□□□□□ -0.58
CLN6-217ENST00000636964 DCUN1D1Q96GG9 259 aa11.4□□□□□ -0.58
CLN6-217ENST00000636964 MYO19Q96H55 970 aa11.4□□□□□ -0.58
CLN6-217ENST00000636964 FERD3LQ96RJ6 166 aa11.4□□□□□ -0.58
CLN6-217ENST00000636964 MRPL57Q9BQC6 102 aaKnown RBP11.4□□□□□ -0.58
CLN6-217ENST00000636964 CEP44Q9C0F1 390 aa11.4□□□□□ -0.58
CLN6-217ENST00000636964 FKBP14Q9NWM8 211 aa11.4□□□□□ -0.58
CLN6-217ENST00000636964 GALPQ9UBC7 116 aa11.4□□□□□ -0.58
CLN6-217ENST00000636964 SLCO3A1Q9UIG8 710 aa11.4□□□□□ -0.58
CLN6-217ENST00000636964 MOSPD1Q9UJG1 213 aa11.4□□□□□ -0.58
CLN6-217ENST00000636964 NOTCH4Q99466 2003 aa11.4□□□□□ -0.58
CLN6-217ENST00000636964 MTCL1Q9Y4B5 1905 aaKnown RBP11.4□□□□□ -0.58
CLN6-217ENST00000636964 ZBTB14O43829 449 aa11.4□□□□□ -0.58
CLN6-217ENST00000636964 NDUFS3O75489 264 aa11.4□□□□□ -0.58
CLN6-217ENST00000636964 ZNF821O75541 412 aaPredicted RBP11.4□□□□□ -0.58
CLN6-217ENST00000636964 HNRNPLP14866 589 aaKnown RBP eCLIP11.4□□□□□ -0.58
CLN6-217ENST00000636964 GLULP15104 373 aa11.4□□□□□ -0.58
CLN6-217ENST00000636964 TFEBP19484 476 aa11.4□□□□□ -0.58
CLN6-217ENST00000636964 PRKACBP22694 351 aa11.4□□□□□ -0.58
CLN6-217ENST00000636964 IDH3AP50213 366 aa11.4□□□□□ -0.58
CLN6-217ENST00000636964 CDKL1Q00532 357 aa11.4□□□□□ -0.58
CLN6-217ENST00000636964 BCL2L1Q07817 233 aa11.4□□□□□ -0.58
CLN6-217ENST00000636964 MRPL28Q13084 256 aaKnown RBP11.4□□□□□ -0.58
CLN6-217ENST00000636964 FUT11Q495W5 492 aa11.4□□□□□ -0.58
CLN6-217ENST00000636964 ARHGAP15Q53QZ3 475 aa11.4□□□□□ -0.58
CLN6-217ENST00000636964 TCHHL1Q5QJ38 904 aaPredicted RBP11.4□□□□□ -0.58
CLN6-217ENST00000636964 TMEM214Q6NUQ4 689 aaKnown RBP11.4□□□□□ -0.58
CLN6-217ENST00000636964 IYDQ6PHW0 289 aa11.4□□□□□ -0.58
CLN6-217ENST00000636964 ADGRD2Q7Z7M1 963 aa11.4□□□□□ -0.58
CLN6-217ENST00000636964 CPNE9Q8IYJ1 553 aa11.4□□□□□ -0.58
CLN6-217ENST00000636964 GPR150Q8NGU9 434 aa11.4□□□□□ -0.58
CLN6-217ENST00000636964 GRIN3AQ8TCU5 1115 aa11.4□□□□□ -0.58
CLN6-217ENST00000636964 TPK1Q9H3S4 243 aa11.4□□□□□ -0.58
CLN6-217ENST00000636964 COG4Q9H9E3 785 aa11.4□□□□□ -0.58
CLN6-217ENST00000636964 FIS1Q9Y3D6 152 aa11.4□□□□□ -0.58
CLN6-217ENST00000636964 GOLGA8QA0A0J9YX86 632 aa11.4□□□□□ -0.59
CLN6-217ENST00000636964 GOLGA8OA6NCC3 632 aa11.4□□□□□ -0.59
CLN6-217ENST00000636964 GOLGA8NF8WBI6 632 aa11.4□□□□□ -0.59
CLN6-217ENST00000636964 FZD6O60353 706 aa11.4□□□□□ -0.59
CLN6-217ENST00000636964 SERPINB7O75635 380 aa11.4□□□□□ -0.59
CLN6-217ENST00000636964 SRP72O76094 671 aaKnown RBP11.4□□□□□ -0.59
CLN6-217ENST00000636964 PGLSO95336 258 aa11.4□□□□□ -0.59
CLN6-217ENST00000636964 CENPAP49450 140 aa11.4□□□□□ -0.59
CLN6-217ENST00000636964 SLC14A2Q15849 920 aa11.4□□□□□ -0.59
CLN6-217ENST00000636964 TECRLQ5HYJ1 363 aa11.4□□□□□ -0.59
CLN6-217ENST00000636964 LRRC73Q5JTD7 316 aa11.4□□□□□ -0.59
CLN6-217ENST00000636964 LY6G5CQ5SRR4 150 aa11.4□□□□□ -0.59
CLN6-217ENST00000636964 MPP7Q5T2T1 576 aa11.4□□□□□ -0.59
CLN6-217ENST00000636964 FAM45BPQ6NSW5 357 aa11.4□□□□□ -0.59
CLN6-217ENST00000636964 AFTPHQ6ULP2 937 aa11.4□□□□□ -0.59
CLN6-217ENST00000636964 UNC5DQ6UXZ4 953 aa11.4□□□□□ -0.59
CLN6-217ENST00000636964 RDH11Q8TC12 318 aa11.4□□□□□ -0.59
CLN6-217ENST00000636964 FAM45AQ8TCE6 357 aa11.4□□□□□ -0.59
CLN6-217ENST00000636964 PIH1D2Q8WWB5 315 aa11.4□□□□□ -0.59
CLN6-217ENST00000636964 PEX13Q92968 403 aa11.4□□□□□ -0.59
CLN6-217ENST00000636964 UBXN10Q96LJ8 280 aa11.4□□□□□ -0.59
CLN6-217ENST00000636964 BTBD9Q96Q07 612 aa11.4□□□□□ -0.59
CLN6-217ENST00000636964 MRPL1Q9BYD6 325 aaKnown RBP11.4□□□□□ -0.59
CLN6-217ENST00000636964 ZDHHC2Q9UIJ5 367 aa11.4□□□□□ -0.59
CLN6-217ENST00000636964 MID2Q9UJV3 735 aa11.4□□□□□ -0.59
CLN6-217ENST00000636964 POMPQ9Y244 141 aa11.4□□□□□ -0.59
CLN6-217ENST00000636964 NEMP1O14524 444 aa11.39□□□□□ -0.59
CLN6-217ENST00000636964 ZNF195O14628 629 aa11.39□□□□□ -0.59
CLN6-217ENST00000636964 RHOBTB1O94844 696 aa11.39□□□□□ -0.59
CLN6-217ENST00000636964 SRCP12931 536 aa11.39□□□□□ -0.59
CLN6-217ENST00000636964 CEBPBP17676 345 aa11.39□□□□□ -0.59
CLN6-217ENST00000636964 TSPAN8P19075 237 aa11.39□□□□□ -0.59
CLN6-217ENST00000636964 XIAPP98170 497 aa11.39□□□□□ -0.59
CLN6-217ENST00000636964 PTPRNQ16849 979 aa11.39□□□□□ -0.59
CLN6-217ENST00000636964 GRAMD1BQ3KR37 738 aa11.39□□□□□ -0.59
CLN6-217ENST00000636964 SLC9B1Q4ZJI4 515 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms