RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 HEMK1Q9Y5R4 338 aaPredicted RBP17.64■□□□□ 0.41
PNKP-225ENST00000636214 EPN1Q9Y6I3 576 aaPredicted RBP17.64■□□□□ 0.41
PNKP-225ENST00000636214 C2orf81A6NN90 581 aa17.63■□□□□ 0.41
PNKP-225ENST00000636214 RAD1O60671 282 aa17.63■□□□□ 0.41
PNKP-225ENST00000636214 MSH3P20585 1137 aa17.63■□□□□ 0.41
PNKP-225ENST00000636214 RBL1P28749 1068 aa17.63■□□□□ 0.41
PNKP-225ENST00000636214 AKT1P31749 480 aa17.63■□□□□ 0.41
PNKP-225ENST00000636214 UGT1A3P35503 534 aa17.63■□□□□ 0.41
PNKP-225ENST00000636214 ZNF75DP51815 510 aa17.63■□□□□ 0.41
PNKP-225ENST00000636214 RWDD2BP57060 319 aa17.63■□□□□ 0.41
PNKP-225ENST00000636214 MC2RQ01718 297 aa17.63■□□□□ 0.41
PNKP-225ENST00000636214 CHRNA6Q15825 494 aa17.63■□□□□ 0.41
PNKP-225ENST00000636214 KIAA1328Q86T90 577 aa17.63■□□□□ 0.41
PNKP-225ENST00000636214 TXLNBQ8N3L3 684 aa17.63■□□□□ 0.41
PNKP-225ENST00000636214 TTC30BQ8N4P2 665 aa17.63■□□□□ 0.41
PNKP-225ENST00000636214 DTX3LQ8TDB6 740 aa17.63■□□□□ 0.41
PNKP-225ENST00000636214 EXTL1Q92935 676 aa17.63■□□□□ 0.41
PNKP-225ENST00000636214 NKD1Q969G9 470 aa17.63■□□□□ 0.41
PNKP-225ENST00000636214 PMEPA1Q969W9 287 aa17.63■□□□□ 0.41
PNKP-225ENST00000636214 PPP1R2P1Q96PQ5 205 aa17.63■□□□□ 0.41
PNKP-225ENST00000636214 CTRCQ99895 268 aa17.63■□□□□ 0.41
PNKP-225ENST00000636214 EFHD1Q9BUP0 239 aa17.63■□□□□ 0.41
PNKP-225ENST00000636214 OSBPL8Q9BZF1 889 aa17.63■□□□□ 0.41
PNKP-225ENST00000636214 SEMA4CQ9C0C4 833 aa17.63■□□□□ 0.41
PNKP-225ENST00000636214 IL26Q9NPH9 171 aa17.63■□□□□ 0.41
PNKP-225ENST00000636214 IL17CQ9P0M4 197 aa17.63■□□□□ 0.41
PNKP-225ENST00000636214 SCHIP1Q9P0W5 487 aaPredicted RBP17.63■□□□□ 0.41
PNKP-225ENST00000636214 EFR3BQ9Y2G0 817 aa17.63■□□□□ 0.41
PNKP-225ENST00000636214 AAR2Q9Y312 384 aaKnown RBP17.63■□□□□ 0.41
PNKP-225ENST00000636214 MN1Q10571 1320 aaPredicted RBP17.63■□□□□ 0.41
PNKP-225ENST00000636214 POLR1CO15160 346 aaPredicted RBP17.62■□□□□ 0.41
PNKP-225ENST00000636214 CAPN5O15484 640 aaPredicted RBP17.62■□□□□ 0.41
PNKP-225ENST00000636214 PJA2O43164 708 aa17.62■□□□□ 0.41
PNKP-225ENST00000636214 RASSF9O75901 435 aa17.62■□□□□ 0.41
PNKP-225ENST00000636214 TJP3O95049 919 aa17.62■□□□□ 0.41
PNKP-225ENST00000636214 SFTPCP11686 197 aa17.62■□□□□ 0.41
PNKP-225ENST00000636214 PLA2G2AP14555 144 aa17.62■□□□□ 0.41
PNKP-225ENST00000636214 TYRP1P17643 537 aa17.62■□□□□ 0.41
PNKP-225ENST00000636214 SLC19A1P41440 591 aa17.62■□□□□ 0.41
PNKP-225ENST00000636214 DRG2P55039 364 aaKnown RBP17.62■□□□□ 0.41
PNKP-225ENST00000636214 EIF3EP60228 445 aaKnown RBP17.62■□□□□ 0.41
PNKP-225ENST00000636214 OTUD4Q01804 1114 aaKnown RBP17.62■□□□□ 0.41
PNKP-225ENST00000636214 FOXM1Q08050 763 aa17.62■□□□□ 0.41
PNKP-225ENST00000636214 LONRF2Q1L5Z9 754 aa17.62■□□□□ 0.41
PNKP-225ENST00000636214 AGAP9Q5VTM2 703 aa17.62■□□□□ 0.41
PNKP-225ENST00000636214 DARS2Q6PI48 645 aaKnown RBP17.62■□□□□ 0.41
PNKP-225ENST00000636214 WASH2PQ6VEQ5 465 aa17.62■□□□□ 0.41
PNKP-225ENST00000636214 AMZ2Q86W34 360 aa17.62■□□□□ 0.41
PNKP-225ENST00000636214 ZNF547Q8IVP9 402 aa17.62■□□□□ 0.41
PNKP-225ENST00000636214 NLGN4XQ8N0W4 816 aa17.62■□□□□ 0.41
PNKP-225ENST00000636214 NLGN4YQ8NFZ3 816 aaPredicted RBP17.62■□□□□ 0.41
PNKP-225ENST00000636214 ACTL9Q8TC94 416 aa17.62■□□□□ 0.41
PNKP-225ENST00000636214 TGM7Q96PF1 710 aa17.62■□□□□ 0.41
PNKP-225ENST00000636214 TRIT1Q9H3H1 467 aaKnown RBP17.62■□□□□ 0.41
PNKP-225ENST00000636214 WASH6PQ9NQA3 447 aa17.62■□□□□ 0.41
PNKP-225ENST00000636214 FBXO8Q9NRD0 319 aa17.62■□□□□ 0.41
PNKP-225ENST00000636214 PCDHA3Q9Y5H8 950 aa17.62■□□□□ 0.41
PNKP-225ENST00000636214 GOLGA6L9A6NEM1 432 aa17.61■□□□□ 0.41
PNKP-225ENST00000636214 OR52A4PA6NMU1 304 aa17.61■□□□□ 0.41
PNKP-225ENST00000636214 B8ZZF3 427 aa17.61■□□□□ 0.41
PNKP-225ENST00000636214 BUD23O43709 281 aaKnown RBP17.61■□□□□ 0.41
PNKP-225ENST00000636214 UGT1A9O60656 530 aa17.61■□□□□ 0.41
PNKP-225ENST00000636214 ANKRD34CP0C6C1 535 aa17.61■□□□□ 0.41
PNKP-225ENST00000636214 RBP3P10745 1247 aa17.61■□□□□ 0.41
PNKP-225ENST00000636214 UGT1A6P19224 532 aa17.61■□□□□ 0.41
PNKP-225ENST00000636214 LPOP22079 712 aaPredicted RBP17.61■□□□□ 0.41
PNKP-225ENST00000636214 UGT1A1P22309 533 aa17.61■□□□□ 0.41
PNKP-225ENST00000636214 UGT1A4P22310 534 aa17.61■□□□□ 0.41
PNKP-225ENST00000636214 MAP4P27816 1152 aaKnown RBP17.61■□□□□ 0.41
PNKP-225ENST00000636214 GFERP55789 205 aa17.61■□□□□ 0.41
PNKP-225ENST00000636214 KHDC1Q4VXA5 237 aaKnown RBP17.61■□□□□ 0.41
PNKP-225ENST00000636214 CYB5D1Q6P9G0 228 aa17.61■□□□□ 0.41
PNKP-225ENST00000636214 TMEM220Q6QAJ8 160 aa17.61■□□□□ 0.41
PNKP-225ENST00000636214 ABRAXAS1Q6UWZ7 409 aa17.61■□□□□ 0.41
PNKP-225ENST00000636214 BMPERQ8N8U9 685 aa17.61■□□□□ 0.41
PNKP-225ENST00000636214 DDHD1Q8NEL9 900 aa17.61■□□□□ 0.41
PNKP-225ENST00000636214 RTP4Q96DX8 246 aa17.61■□□□□ 0.41
PNKP-225ENST00000636214 ZDHHC12Q96GR4 267 aa17.61■□□□□ 0.41
PNKP-225ENST00000636214 ZNF514Q96K75 400 aaPredicted RBP17.61■□□□□ 0.41
PNKP-225ENST00000636214 C9orf72Q96LT7 481 aa17.61■□□□□ 0.41
PNKP-225ENST00000636214 FAM117AQ9C073 453 aa17.61■□□□□ 0.41
PNKP-225ENST00000636214 C10orf88Q9H8K7 445 aa17.61■□□□□ 0.41
PNKP-225ENST00000636214 GPN2Q9H9Y4 310 aaPredicted RBP17.61■□□□□ 0.41
PNKP-225ENST00000636214 UGT1A7Q9HAW7 530 aa17.61■□□□□ 0.41
PNKP-225ENST00000636214 UGT1A10Q9HAW8 530 aa17.61■□□□□ 0.41
PNKP-225ENST00000636214 UGT1A8Q9HAW9 530 aa17.61■□□□□ 0.41
PNKP-225ENST00000636214 ZNF624Q9P2J8 865 aaPredicted RBP17.61■□□□□ 0.41
PNKP-225ENST00000636214 TLN1Q9Y490 2541 aaKnown RBP17.6■□□□□ 0.41
PNKP-225ENST00000636214 OR2AG2A6NM03 316 aa17.6■□□□□ 0.41
PNKP-225ENST00000636214 ZNF891A8MT65 544 aaPredicted RBP17.6■□□□□ 0.41
PNKP-225ENST00000636214 BTNL10A8MVZ5 291 aa17.6■□□□□ 0.41
PNKP-225ENST00000636214 TOX3O15405 576 aaPredicted RBP17.6■□□□□ 0.41
PNKP-225ENST00000636214 KCNN4O15554 427 aa17.6■□□□□ 0.41
PNKP-225ENST00000636214 PRAMEF1O95521 474 aa17.6■□□□□ 0.41
PNKP-225ENST00000636214 AGTP01019 485 aa17.6■□□□□ 0.41
PNKP-225ENST00000636214 PBLDP30039 288 aaPredicted RBP17.6■□□□□ 0.41
PNKP-225ENST00000636214 PTPN7P35236 360 aa17.6■□□□□ 0.41
PNKP-225ENST00000636214 CAPZBP47756 277 aa17.6■□□□□ 0.41
PNKP-225ENST00000636214 PDE1BQ01064 536 aa17.6■□□□□ 0.41
PNKP-225ENST00000636214 PLCL1Q15111 1095 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms