RNA–Protein interactions for RNA: ENST00000635853.1

SPTAN1-228, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 5

Gene SPTAN1, Length 5,870 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-228ENST00000635853 PAQR5Q9NXK6 330 aaPredicted RBP9.77□□□□□ -0.84
SPTAN1-228ENST00000635853 HCN3Q9P1Z3 774 aa9.77□□□□□ -0.84
SPTAN1-228ENST00000635853 TNPO3Q9Y5L0 923 aaKnown RBP9.77□□□□□ -0.84
SPTAN1-228ENST00000635853 ARHGEF28Q8N1W1 1705 aaKnown RBP9.77□□□□□ -0.84
SPTAN1-228ENST00000635853 CNTNAP4Q9C0A0 1308 aa9.77□□□□□ -0.84
SPTAN1-228ENST00000635853 ZNF208O43345 1280 aa9.77□□□□□ -0.85
SPTAN1-228ENST00000635853 MATN4O95460 622 aa9.77□□□□□ -0.85
SPTAN1-228ENST00000635853 DHFRP00374 187 aa9.77□□□□□ -0.85
SPTAN1-228ENST00000635853 XRCC1P18887 633 aaPredicted RBP9.77□□□□□ -0.85
SPTAN1-228ENST00000635853 IL4RP24394 825 aa9.77□□□□□ -0.85
SPTAN1-228ENST00000635853 HSD3B2P26439 372 aa9.77□□□□□ -0.85
SPTAN1-228ENST00000635853 PDHA2P29803 388 aa9.77□□□□□ -0.85
SPTAN1-228ENST00000635853 CD83Q01151 205 aa9.77□□□□□ -0.85
SPTAN1-228ENST00000635853 TPRG1LQ5T0D9 272 aa9.77□□□□□ -0.85
SPTAN1-228ENST00000635853 HIPK1Q86Z02 1210 aa9.77□□□□□ -0.85
SPTAN1-228ENST00000635853 FAM71AQ8IYT1 594 aa9.77□□□□□ -0.85
SPTAN1-228ENST00000635853 DEFB106AQ8N104 65 aa9.77□□□□□ -0.85
SPTAN1-228ENST00000635853 FAM109AQ8N4B1 249 aa9.77□□□□□ -0.85
SPTAN1-228ENST00000635853 ROPN1LQ96C74 230 aa9.77□□□□□ -0.85
SPTAN1-228ENST00000635853 DNAJC19Q96DA6 116 aa9.77□□□□□ -0.85
SPTAN1-228ENST00000635853 MAGEL2Q9UJ55 1249 aa9.77□□□□□ -0.85
SPTAN1-228ENST00000635853 CORO2BQ9UQ03 480 aa9.77□□□□□ -0.85
SPTAN1-228ENST00000635853 MROH2AA6NES4 1674 aa9.77□□□□□ -0.85
SPTAN1-228ENST00000635853 FADS2P1A8MWK0 482 aa9.77□□□□□ -0.85
SPTAN1-228ENST00000635853 SLC28A1O00337 649 aa9.77□□□□□ -0.85
SPTAN1-228ENST00000635853 NRP2O60462 931 aa9.77□□□□□ -0.85
SPTAN1-228ENST00000635853 GLUD1P00367 558 aa9.77□□□□□ -0.85
SPTAN1-228ENST00000635853 ZNF806P0C7X5 589 aa9.77□□□□□ -0.85
SPTAN1-228ENST00000635853 MAPK8P45983 427 aa9.77□□□□□ -0.85
SPTAN1-228ENST00000635853 ATXN1P54253 815 aaKnown RBP9.77□□□□□ -0.85
SPTAN1-228ENST00000635853 MRPS6P82932 125 aaKnown RBP9.77□□□□□ -0.85
SPTAN1-228ENST00000635853 PSMD5Q16401 504 aa9.77□□□□□ -0.85
SPTAN1-228ENST00000635853 OAFQ86UD1 273 aa9.77□□□□□ -0.85
SPTAN1-228ENST00000635853 AMIGO1Q86WK6 493 aa9.77□□□□□ -0.85
SPTAN1-228ENST00000635853 C7orf61Q8IZ16 206 aa9.77□□□□□ -0.85
SPTAN1-228ENST00000635853 NAT16Q8N8M0 369 aa9.77□□□□□ -0.85
SPTAN1-228ENST00000635853 HJURPQ8NCD3 748 aaPredicted RBP9.77□□□□□ -0.85
SPTAN1-228ENST00000635853 GPR156Q8NFN8 814 aa9.77□□□□□ -0.85
SPTAN1-228ENST00000635853 FCGR1BQ92637 280 aa9.77□□□□□ -0.85
SPTAN1-228ENST00000635853 NELL1Q92832 810 aa9.77□□□□□ -0.85
SPTAN1-228ENST00000635853 GTPBP2Q9BX10 602 aaKnown RBP9.77□□□□□ -0.85
SPTAN1-228ENST00000635853 CLN6Q9NWW5 311 aa9.77□□□□□ -0.85
SPTAN1-228ENST00000635853 RGS17Q9UGC6 210 aaPredicted RBP9.77□□□□□ -0.85
SPTAN1-228ENST00000635853 QSOX1O00391 747 aa9.77□□□□□ -0.85
SPTAN1-228ENST00000635853 BCKDKO14874 412 aa9.77□□□□□ -0.85
SPTAN1-228ENST00000635853 PIAS1O75925 651 aa9.77□□□□□ -0.85
SPTAN1-228ENST00000635853 PTTG1O95997 202 aa9.77□□□□□ -0.85
SPTAN1-228ENST00000635853 RPLP0P05388 317 aaKnown RBP9.77□□□□□ -0.85
SPTAN1-228ENST00000635853 FAM86B2P0C5J1 330 aa9.77□□□□□ -0.85
SPTAN1-228ENST00000635853 BMP7P18075 431 aa9.77□□□□□ -0.85
SPTAN1-228ENST00000635853 MYL9P24844 172 aa9.77□□□□□ -0.85
SPTAN1-228ENST00000635853 SCNN1GP51170 649 aa9.77□□□□□ -0.85
SPTAN1-228ENST00000635853 SEC13P55735 322 aa9.77□□□□□ -0.85
SPTAN1-228ENST00000635853 FMO1Q01740 532 aa9.77□□□□□ -0.85
SPTAN1-228ENST00000635853 MAMLD1Q13495 774 aa9.77□□□□□ -0.85
SPTAN1-228ENST00000635853 ATP13A5Q4VNC0 1218 aa9.77□□□□□ -0.85
SPTAN1-228ENST00000635853 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.77□□□□□ -0.85
SPTAN1-228ENST00000635853 SLC15A3Q8IY34 581 aa9.77□□□□□ -0.85
SPTAN1-228ENST00000635853 SVOPLQ8N434 492 aa9.77□□□□□ -0.85
SPTAN1-228ENST00000635853 HDDC3Q8N4P3 179 aa9.77□□□□□ -0.85
SPTAN1-228ENST00000635853 AKT1S1Q96B36 256 aa9.77□□□□□ -0.85
SPTAN1-228ENST00000635853 MSANTD3Q96H12 275 aa9.77□□□□□ -0.85
SPTAN1-228ENST00000635853 TNKS2Q9H2K2 1166 aa9.77□□□□□ -0.85
SPTAN1-228ENST00000635853 C3orf14Q9HBI5 128 aa9.77□□□□□ -0.85
SPTAN1-228ENST00000635853 CPQQ9Y646 472 aa9.77□□□□□ -0.85
SPTAN1-228ENST00000635853 ASTN1O14525 1302 aa9.77□□□□□ -0.85
SPTAN1-228ENST00000635853 GAKO14976 1311 aa9.77□□□□□ -0.85
SPTAN1-228ENST00000635853 SPATA31D1Q6ZQQ2 1576 aa9.77□□□□□ -0.85
SPTAN1-228ENST00000635853 NEDD8-MDP1E9PL57 170 aa9.77□□□□□ -0.85
SPTAN1-228ENST00000635853 ORC5O43913 435 aa9.77□□□□□ -0.85
SPTAN1-228ENST00000635853 ERAL1O75616 437 aaKnown RBP9.77□□□□□ -0.85
SPTAN1-228ENST00000635853 PPM1AP35813 382 aa9.77□□□□□ -0.85
SPTAN1-228ENST00000635853 PSMD8P48556 350 aa9.77□□□□□ -0.85
SPTAN1-228ENST00000635853 TAGLNQ01995 201 aaKnown RBP9.77□□□□□ -0.85
SPTAN1-228ENST00000635853 KIF18BQ86Y91 864 aa9.77□□□□□ -0.85
SPTAN1-228ENST00000635853 TICAM1Q8IUC6 712 aa9.77□□□□□ -0.85
SPTAN1-228ENST00000635853 SLC47A1Q96FL8 570 aa9.77□□□□□ -0.85
SPTAN1-228ENST00000635853 FNDC11Q9BVV2 318 aa9.77□□□□□ -0.85
SPTAN1-228ENST00000635853 FTHL17Q9BXU8 183 aa9.77□□□□□ -0.85
SPTAN1-228ENST00000635853 KCNU1A8MYU2 1149 aa9.76□□□□□ -0.85
SPTAN1-228ENST00000635853 ALDH4A1P30038 563 aa9.76□□□□□ -0.85
SPTAN1-228ENST00000635853 NOMO2Q5JPE7 1267 aa9.76□□□□□ -0.85
SPTAN1-228ENST00000635853 AGAP7PQ5VUJ5 663 aa9.76□□□□□ -0.85
SPTAN1-228ENST00000635853 SPESP1Q6UW49 350 aa9.76□□□□□ -0.85
SPTAN1-228ENST00000635853 SPARTQ8N0X7 666 aa9.76□□□□□ -0.85
SPTAN1-228ENST00000635853 TRAPPC12Q8WVT3 735 aa9.76□□□□□ -0.85
SPTAN1-228ENST00000635853 TEKT5Q96M29 485 aa9.76□□□□□ -0.85
SPTAN1-228ENST00000635853 C1QTNF1Q9BXJ1 281 aa9.76□□□□□ -0.85
SPTAN1-228ENST00000635853 IMP3Q9NV31 184 aaKnown RBP9.76□□□□□ -0.85
SPTAN1-228ENST00000635853 ASTN2O75129 1339 aaPredicted RBP9.76□□□□□ -0.85
SPTAN1-228ENST00000635853 FAM149AA5PLN7 773 aa9.76□□□□□ -0.85
SPTAN1-228ENST00000635853 HACD1B0YJ81 288 aa9.76□□□□□ -0.85
SPTAN1-228ENST00000635853 FGF10O15520 208 aaPredicted RBP9.76□□□□□ -0.85
SPTAN1-228ENST00000635853 CSH1P0DML2 217 aa9.76□□□□□ -0.85
SPTAN1-228ENST00000635853 CSH2P0DML3 217 aa9.76□□□□□ -0.85
SPTAN1-228ENST00000635853 MAPTP10636 758 aaKnown RBP9.76□□□□□ -0.85
SPTAN1-228ENST00000635853 IMPDH1P20839 514 aa9.76□□□□□ -0.85
SPTAN1-228ENST00000635853 RPL3P39023 403 aaKnown RBP9.76□□□□□ -0.85
SPTAN1-228ENST00000635853 BUD31P41223 144 aaPredicted RBP9.76□□□□□ -0.85
SPTAN1-228ENST00000635853 CD86P42081 329 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms