RNA–Protein interactions for RNA: ENST00000635754.1

CLN6-211, Transcript of CLN6, transmembrane ER protein, humanhuman

Gene CLN6, Length 1,441 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-211ENST00000635754 TOR4AQ9NXH8 423 aa15.26■□□□□ 0.03
CLN6-211ENST00000635754 PADI4Q9UM07 663 aa15.26■□□□□ 0.03
CLN6-211ENST00000635754 DNAJC16Q9Y2G8 782 aa15.26■□□□□ 0.03
CLN6-211ENST00000635754 SNX24Q9Y343 169 aa15.26■□□□□ 0.03
CLN6-211ENST00000635754 PCDHGA1Q9Y5H4 931 aa15.26■□□□□ 0.03
CLN6-211ENST00000635754 U3KQA8 63 aa15.26■□□□□ 0.03
CLN6-211ENST00000635754 CPED1A4D0V7 1026 aa15.25■□□□□ 0.03
CLN6-211ENST00000635754 CTAGE15A4D2H0 777 aa15.25■□□□□ 0.03
CLN6-211ENST00000635754 VAPBO95292 243 aa15.25■□□□□ 0.03
CLN6-211ENST00000635754 CTAGE8P0CG41 777 aa15.25■□□□□ 0.03
CLN6-211ENST00000635754 CLCNKAP51800 687 aa15.25■□□□□ 0.03
CLN6-211ENST00000635754 ITIH4Q14624 930 aa15.25■□□□□ 0.03
CLN6-211ENST00000635754 BCL7AQ4VC05 210 aa15.25■□□□□ 0.03
CLN6-211ENST00000635754 C14orf28Q4W4Y0 310 aa15.25■□□□□ 0.03
CLN6-211ENST00000635754 KIAA0930Q6ICG6 404 aaPredicted RBP15.25■□□□□ 0.03
CLN6-211ENST00000635754 ERMP1Q7Z2K6 904 aa15.25■□□□□ 0.03
CLN6-211ENST00000635754 C11orf96Q7Z7L8 435 aa15.25■□□□□ 0.03
CLN6-211ENST00000635754 CTAGE6Q86UF2 777 aa15.25■□□□□ 0.03
CLN6-211ENST00000635754 SLCO6A1Q86UG4 719 aa15.25■□□□□ 0.03
CLN6-211ENST00000635754 AMZ2Q86W34 360 aa15.25■□□□□ 0.03
CLN6-211ENST00000635754 CTAGE4Q8IX94 777 aa15.25■□□□□ 0.03
CLN6-211ENST00000635754 OTUD6BQ8N6M0 293 aa15.25■□□□□ 0.03
CLN6-211ENST00000635754 NAT6Q93015 286 aa15.25■□□□□ 0.03
CLN6-211ENST00000635754 WHRNQ9P202 907 aa15.25■□□□□ 0.03
CLN6-211ENST00000635754 SLC23A2Q9UGH3 650 aa15.25■□□□□ 0.03
CLN6-211ENST00000635754 DNMT3AQ9Y6K1 912 aaPredicted RBP15.25■□□□□ 0.03
CLN6-211ENST00000635754 RPS6KL1Q9Y6S9 549 aa15.25■□□□□ 0.03
CLN6-211ENST00000635754 SPTBN2O15020 2390 aa15.25■□□□□ 0.03
CLN6-211ENST00000635754 KLHL33A6NCF5 533 aa15.24■□□□□ 0.03
CLN6-211ENST00000635754 CD3EAPO15446 510 aaKnown RBP15.24■□□□□ 0.03
CLN6-211ENST00000635754 NOBOXO60393 691 aa15.24■□□□□ 0.03
CLN6-211ENST00000635754 SNX2O60749 519 aa15.24■□□□□ 0.03
CLN6-211ENST00000635754 KCNJ13O60928 360 aa15.24■□□□□ 0.03
CLN6-211ENST00000635754 POP7O75817 140 aaKnown RBP15.24■□□□□ 0.03
CLN6-211ENST00000635754 USP1O94782 785 aa15.24■□□□□ 0.03
CLN6-211ENST00000635754 TRIM16O95361 564 aa15.24■□□□□ 0.03
CLN6-211ENST00000635754 POLBP06746 335 aa15.24■□□□□ 0.03
CLN6-211ENST00000635754 GP1BAP07359 652 aa15.24■□□□□ 0.03
CLN6-211ENST00000635754 CDK4P11802 303 aa15.24■□□□□ 0.03
CLN6-211ENST00000635754 SLC2A4P14672 509 aa15.24■□□□□ 0.03
CLN6-211ENST00000635754 PBLDP30039 288 aaPredicted RBP15.24■□□□□ 0.03
CLN6-211ENST00000635754 NSG1P42857 185 aa15.24■□□□□ 0.03
CLN6-211ENST00000635754 TTPAP49638 278 aa15.24■□□□□ 0.03
CLN6-211ENST00000635754 PRLHRP49683 370 aa15.24■□□□□ 0.03
CLN6-211ENST00000635754 ARL4CP56559 192 aa15.24■□□□□ 0.03
CLN6-211ENST00000635754 DHX9Q08211 1270 aaKnown RBP15.24■□□□□ 0.03
CLN6-211ENST00000635754 HIF1AQ16665 826 aa15.24■□□□□ 0.03
CLN6-211ENST00000635754 BBS9Q3SYG4 887 aa15.24■□□□□ 0.03
CLN6-211ENST00000635754 ANKRD20A4Q4UJ75 823 aa15.24■□□□□ 0.03
CLN6-211ENST00000635754 N4BP2L1Q5TBK1 243 aaPredicted RBP15.24■□□□□ 0.03
CLN6-211ENST00000635754 DUPD1Q68J44 220 aa15.24■□□□□ 0.03
CLN6-211ENST00000635754 GUSBP11Q6P575 273 aa15.24■□□□□ 0.03
CLN6-211ENST00000635754 PACS1Q6VY07 963 aa15.24■□□□□ 0.03
CLN6-211ENST00000635754 EFL1Q7Z2Z2 1120 aaKnown RBP15.24■□□□□ 0.03
CLN6-211ENST00000635754 TMEM135Q86UB9 458 aa15.24■□□□□ 0.03
CLN6-211ENST00000635754 NAGSQ8N159 534 aa15.24■□□□□ 0.03
CLN6-211ENST00000635754 AGGF1Q8N302 714 aaeCLIP15.24■□□□□ 0.03
CLN6-211ENST00000635754 OR6C4Q8NGE1 309 aa15.24■□□□□ 0.03
CLN6-211ENST00000635754 IFI44Q8TCB0 444 aa15.24■□□□□ 0.03
CLN6-211ENST00000635754 TRIM56Q9BRZ2 755 aaKnown RBP15.24■□□□□ 0.03
CLN6-211ENST00000635754 NAT9Q9BTE0 207 aa15.24■□□□□ 0.03
CLN6-211ENST00000635754 VPS37BQ9H9H4 285 aa15.24■□□□□ 0.03
CLN6-211ENST00000635754 TBC1D29Q9UFV1 150 aa15.24■□□□□ 0.03
CLN6-211ENST00000635754 PIKFYVEQ9Y2I7 2098 aa15.23■□□□□ 0.03
CLN6-211ENST00000635754 EME2A4GXA9 379 aaPredicted RBP15.23■□□□□ 0.03
CLN6-211ENST00000635754 QSOX1O00391 747 aa15.23■□□□□ 0.03
CLN6-211ENST00000635754 DKK1O94907 266 aa15.23■□□□□ 0.03
CLN6-211ENST00000635754 AP2A2O94973 939 aa15.23■□□□□ 0.03
CLN6-211ENST00000635754 F3P13726 295 aa15.23■□□□□ 0.03
CLN6-211ENST00000635754 PGAM1P18669 254 aa15.23■□□□□ 0.03
CLN6-211ENST00000635754 IDSP22304 550 aa15.23■□□□□ 0.03
CLN6-211ENST00000635754 ARNTP27540 789 aa15.23■□□□□ 0.03
CLN6-211ENST00000635754 DMPKQ09013 629 aa15.23■□□□□ 0.03
CLN6-211ENST00000635754 BIRC2Q13490 618 aa15.23■□□□□ 0.03
CLN6-211ENST00000635754 HLTFQ14527 1009 aaKnown RBP eCLIP15.23■□□□□ 0.03
CLN6-211ENST00000635754 SEMA3AQ14563 771 aa15.23■□□□□ 0.03
CLN6-211ENST00000635754 MSS51Q4VC12 460 aa15.23■□□□□ 0.03
CLN6-211ENST00000635754 MRNIPQ6NTE8 343 aa15.23■□□□□ 0.03
CLN6-211ENST00000635754 SFTPA2Q8IWL1 248 aa15.23■□□□□ 0.03
CLN6-211ENST00000635754 BEND7Q8N7W2 519 aaPredicted RBP15.23■□□□□ 0.03
CLN6-211ENST00000635754 CEP112Q8N8E3 955 aa15.23■□□□□ 0.03
CLN6-211ENST00000635754 PNPLA1Q8N8W4 532 aa15.23■□□□□ 0.03
CLN6-211ENST00000635754 NAT14Q8WUY8 206 aa15.23■□□□□ 0.03
CLN6-211ENST00000635754 LRRC39Q96DD0 335 aa15.23■□□□□ 0.03
CLN6-211ENST00000635754 CCDC97Q96F63 343 aaPredicted RBP15.23■□□□□ 0.03
CLN6-211ENST00000635754 EBNA1BP2Q99848 306 aaKnown RBP15.23■□□□□ 0.03
CLN6-211ENST00000635754 MARCH4Q9P2E8 410 aaPredicted RBP15.23■□□□□ 0.03
CLN6-211ENST00000635754 PDZK1P1A8MUH7 402 aa15.22■□□□□ 0.03
CLN6-211ENST00000635754 TP73O15350 636 aa15.22■□□□□ 0.03
CLN6-211ENST00000635754 SGTAO43765 313 aa15.22■□□□□ 0.03
CLN6-211ENST00000635754 BANF1O75531 89 aa15.22■□□□□ 0.03
CLN6-211ENST00000635754 TTC4O95801 387 aa15.22■□□□□ 0.03
CLN6-211ENST00000635754 GLB1P16278 677 aa15.22■□□□□ 0.03
CLN6-211ENST00000635754 PMLP29590 882 aa15.22■□□□□ 0.03
CLN6-211ENST00000635754 MAZP56270 477 aaKnown RBP15.22■□□□□ 0.03
CLN6-211ENST00000635754 SDCCAG8Q86SQ7 713 aaPredicted RBP15.22■□□□□ 0.03
CLN6-211ENST00000635754 C17orf82Q86X59 251 aaPredicted RBP15.22■□□□□ 0.03
CLN6-211ENST00000635754 CCNJLQ8IV13 435 aa15.22■□□□□ 0.03
CLN6-211ENST00000635754 MMGT1Q8N4V1 131 aa15.22■□□□□ 0.03
CLN6-211ENST00000635754 CLDN19Q8N6F1 224 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms