RNA–Protein interactions for RNA: ENST00000633899.1

SF1-221, Transcript of splicing factor 1, humanhuman

TSL 4

Gene SF1, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-221ENST00000633899 CACNG1Q06432 222 aa20.53■□□□□ 0.88
SF1-221ENST00000633899 NR1D2Q14995 579 aa20.53■□□□□ 0.88
SF1-221ENST00000633899 FOXR1Q6PIV2 292 aa20.53■□□□□ 0.88
SF1-221ENST00000633899 CCDC137Q6PK04 289 aaKnown RBP20.53■□□□□ 0.88
SF1-221ENST00000633899 NLRP9Q7RTR0 991 aa20.53■□□□□ 0.88
SF1-221ENST00000633899 PIM3Q86V86 326 aa20.53■□□□□ 0.88
SF1-221ENST00000633899 PROSER1Q86XN7 944 aa20.53■□□□□ 0.88
SF1-221ENST00000633899 LSMEM2Q8N112 164 aa20.53■□□□□ 0.88
SF1-221ENST00000633899 TBRG4Q969Z0 631 aaKnown RBP eCLIP20.53■□□□□ 0.88
SF1-221ENST00000633899 RANBP9Q96S59 729 aa20.53■□□□□ 0.88
SF1-221ENST00000633899 FOXP3Q9BZS1 431 aa20.53■□□□□ 0.88
SF1-221ENST00000633899 SARS2Q9NP81 518 aaKnown RBP20.53■□□□□ 0.88
SF1-221ENST00000633899 SMARCAL1Q9NZC9 954 aa20.53■□□□□ 0.88
SF1-221ENST00000633899 DNMT3AQ9Y6K1 912 aaPredicted RBP20.53■□□□□ 0.88
SF1-221ENST00000633899 KIF26BQ2KJY2 2108 aa20.53■□□□□ 0.88
SF1-221ENST00000633899 IGF2RP11717 2491 aa20.52■□□□□ 0.88
SF1-221ENST00000633899 CCDC187A0A096LP49 1063 aa20.52■□□□□ 0.88
SF1-221ENST00000633899 A6NCN8 305 aa20.52■□□□□ 0.88
SF1-221ENST00000633899 MROH6A6NGR9 719 aa20.52■□□□□ 0.88
SF1-221ENST00000633899 B4GAT1O43505 415 aa20.52■□□□□ 0.88
SF1-221ENST00000633899 MPOP05164 745 aa20.52■□□□□ 0.88
SF1-221ENST00000633899 RPL10P27635 214 aaKnown RBP20.52■□□□□ 0.88
SF1-221ENST00000633899 COILP38432 576 aaPredicted RBP20.52■□□□□ 0.88
SF1-221ENST00000633899 HALP42357 657 aa20.52■□□□□ 0.88
SF1-221ENST00000633899 TERF1P54274 439 aa20.52■□□□□ 0.88
SF1-221ENST00000633899 SESN2P58004 480 aaPredicted RBP20.52■□□□□ 0.88
SF1-221ENST00000633899 GPS1Q13098 491 aa20.52■□□□□ 0.88
SF1-221ENST00000633899 C11orf96Q7Z7L8 435 aa20.52■□□□□ 0.88
SF1-221ENST00000633899 SERPINA9Q86WD7 417 aa20.52■□□□□ 0.88
SF1-221ENST00000633899 ZNF761Q86XN6 746 aaPredicted RBP20.52■□□□□ 0.88
SF1-221ENST00000633899 OR10G6Q8NH81 332 aa20.52■□□□□ 0.88
SF1-221ENST00000633899 GRK7Q8WTQ7 553 aa20.52■□□□□ 0.88
SF1-221ENST00000633899 SGF29Q96ES7 293 aa20.52■□□□□ 0.88
SF1-221ENST00000633899 LDHAL6BQ9BYZ2 381 aaPredicted RBP20.52■□□□□ 0.88
SF1-221ENST00000633899 POLR1BQ9H9Y6 1135 aa20.52■□□□□ 0.88
SF1-221ENST00000633899 ZDHHC3Q9NYG2 299 aa20.52■□□□□ 0.88
SF1-221ENST00000633899 CPNE7Q9UBL6 633 aa20.52■□□□□ 0.88
SF1-221ENST00000633899 SATB2Q9UPW6 733 aa20.52■□□□□ 0.88
SF1-221ENST00000633899 AGAP14A8MT82 685 aa20.51■□□□□ 0.87
SF1-221ENST00000633899 ZNF185O15231 689 aa20.51■□□□□ 0.87
SF1-221ENST00000633899 BRINP1O60477 761 aa20.51■□□□□ 0.87
SF1-221ENST00000633899 PHF2O75151 1096 aa20.51■□□□□ 0.87
SF1-221ENST00000633899 VIPP01282 170 aa20.51■□□□□ 0.87
SF1-221ENST00000633899 TPSB2P20231 275 aa20.51■□□□□ 0.87
SF1-221ENST00000633899 ACRV1P26436 265 aa20.51■□□□□ 0.87
SF1-221ENST00000633899 LSSP48449 732 aa20.51■□□□□ 0.87
SF1-221ENST00000633899 PDX1P52945 283 aa20.51■□□□□ 0.87
SF1-221ENST00000633899 DRG2P55039 364 aaKnown RBP20.51■□□□□ 0.87
SF1-221ENST00000633899 GPLD1P80108 840 aa20.51■□□□□ 0.87
SF1-221ENST00000633899 SARNPP82979 210 aaKnown RBP20.51■□□□□ 0.87
SF1-221ENST00000633899 TPSAB1Q15661 275 aa20.51■□□□□ 0.87
SF1-221ENST00000633899 CYP1B1Q16678 543 aa20.51■□□□□ 0.87
SF1-221ENST00000633899 CLPPQ16740 277 aaPredicted RBP20.51■□□□□ 0.87
SF1-221ENST00000633899 CHCHD2P9Q5T1J5 151 aaPredicted RBP20.51■□□□□ 0.87
SF1-221ENST00000633899 PHF19Q5T6S3 580 aa20.51■□□□□ 0.87
SF1-221ENST00000633899 TSTD2Q5T7W7 516 aa20.51■□□□□ 0.87
SF1-221ENST00000633899 TTC27Q6P3X3 843 aa20.51■□□□□ 0.87
SF1-221ENST00000633899 USP53Q70EK8 1073 aa20.51■□□□□ 0.87
SF1-221ENST00000633899 B3GNT8Q7Z7M8 397 aa20.51■□□□□ 0.87
SF1-221ENST00000633899 BEND7Q8N7W2 519 aaPredicted RBP20.51■□□□□ 0.87
SF1-221ENST00000633899 WDR36Q8NI36 951 aaKnown RBP20.51■□□□□ 0.87
SF1-221ENST00000633899 CXorf40BQ96DE9 158 aa20.51■□□□□ 0.87
SF1-221ENST00000633899 RDH14Q9HBH5 336 aa20.51■□□□□ 0.87
SF1-221ENST00000633899 BFARQ9NZS9 450 aa20.51■□□□□ 0.87
SF1-221ENST00000633899 TCAF1Q9Y4C2 921 aa20.51■□□□□ 0.87
SF1-221ENST00000633899 KLHL33A6NCF5 533 aa20.5■□□□□ 0.87
SF1-221ENST00000633899 DUX1O43812 170 aa20.5■□□□□ 0.87
SF1-221ENST00000633899 CAPNS1P04632 268 aa20.5■□□□□ 0.87
SF1-221ENST00000633899 ATP1B2P14415 290 aaPredicted RBP20.5■□□□□ 0.87
SF1-221ENST00000633899 RBMS1P29558 406 aaKnown RBP20.5■□□□□ 0.87
SF1-221ENST00000633899 CCKBRP32239 447 aa20.5■□□□□ 0.87
SF1-221ENST00000633899 MAPK9P45984 424 aa20.5■□□□□ 0.87
SF1-221ENST00000633899 PRAMEP78395 509 aa20.5■□□□□ 0.87
SF1-221ENST00000633899 CDK16Q00536 496 aa20.5■□□□□ 0.87
SF1-221ENST00000633899 DMPKQ09013 629 aa20.5■□□□□ 0.87
SF1-221ENST00000633899 EIF3IQ13347 325 aaKnown RBP20.5■□□□□ 0.87
SF1-221ENST00000633899 BCL7AQ4VC05 210 aa20.5■□□□□ 0.87
SF1-221ENST00000633899 AFTPHQ6ULP2 937 aa20.5■□□□□ 0.87
SF1-221ENST00000633899 LIN37Q96GY3 246 aaPredicted RBP20.5■□□□□ 0.87
SF1-221ENST00000633899 TTC1Q99614 292 aa20.5■□□□□ 0.87
SF1-221ENST00000633899 NAPGQ99747 312 aaPredicted RBP20.5■□□□□ 0.87
SF1-221ENST00000633899 VPS37BQ9H9H4 285 aa20.5■□□□□ 0.87
SF1-221ENST00000633899 AKAP7Q9P0M2 348 aaPredicted RBP20.5■□□□□ 0.87
SF1-221ENST00000633899 FAM8A1Q9UBU6 413 aa20.5■□□□□ 0.87
SF1-221ENST00000633899 RIMKLBQ9ULI2 386 aa20.5■□□□□ 0.87
SF1-221ENST00000633899 ASPMQ8IZT6 3477 aa20.5■□□□□ 0.87
SF1-221ENST00000633899 PIKFYVEQ9Y2I7 2098 aa20.5■□□□□ 0.87
SF1-221ENST00000633899 IGHV1OR21-1A0A087WYE8 117 aa20.49■□□□□ 0.87
SF1-221ENST00000633899 MGAT4DA6NG13 374 aa20.49■□□□□ 0.87
SF1-221ENST00000633899 XRCC1P18887 633 aaPredicted RBP20.49■□□□□ 0.87
SF1-221ENST00000633899 NPY2RP49146 381 aa20.49■□□□□ 0.87
SF1-221ENST00000633899 FNTAP49354 379 aa20.49■□□□□ 0.87
SF1-221ENST00000633899 CDKN1CP49918 316 aaPredicted RBP20.49■□□□□ 0.87
SF1-221ENST00000633899 ARSDP51689 593 aa20.49■□□□□ 0.87
SF1-221ENST00000633899 NFE2L1Q14494 772 aa20.49■□□□□ 0.87
SF1-221ENST00000633899 PCID2Q5JVF3 399 aa20.49■□□□□ 0.87
SF1-221ENST00000633899 AGAP9Q5VTM2 703 aa20.49■□□□□ 0.87
SF1-221ENST00000633899 NKAIN2Q5VXU1 208 aa20.49■□□□□ 0.87
SF1-221ENST00000633899 ABRAXAS1Q6UWZ7 409 aa20.49■□□□□ 0.87
SF1-221ENST00000633899 WASH2PQ6VEQ5 465 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms