RNA–Protein interactions for RNA: ENST00000633552.1

GPCPD1-207, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

TSL 5

Gene GPCPD1, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-207ENST00000633552 KMT5CQ86Y97 462 aa4.3□□□□□ -1.72
GPCPD1-207ENST00000633552 GALNT13Q8IUC8 556 aa4.3□□□□□ -1.72
GPCPD1-207ENST00000633552 C1orf87Q8N0U7 546 aa4.3□□□□□ -1.72
GPCPD1-207ENST00000633552 FBXO39Q8N4B4 442 aa4.3□□□□□ -1.72
GPCPD1-207ENST00000633552 AFAP1Q8N556 730 aa4.3□□□□□ -1.72
GPCPD1-207ENST00000633552 ZNF441Q8N8Z8 693 aa4.3□□□□□ -1.72
GPCPD1-207ENST00000633552 TMEM255BQ8WV15 326 aa4.3□□□□□ -1.72
GPCPD1-207ENST00000633552 OXNAD1Q96HP4 312 aaPredicted RBP4.3□□□□□ -1.72
GPCPD1-207ENST00000633552 IL17FQ96PD4 163 aa4.3□□□□□ -1.72
GPCPD1-207ENST00000633552 GCNAQ96QF7 691 aa4.3□□□□□ -1.72
GPCPD1-207ENST00000633552 SYT17Q9BSW7 474 aa4.3□□□□□ -1.72
GPCPD1-207ENST00000633552 C1QTNF4Q9BXJ3 329 aa4.3□□□□□ -1.72
GPCPD1-207ENST00000633552 CSTL1Q9H114 145 aa4.3□□□□□ -1.72
GPCPD1-207ENST00000633552 GAREM1Q9H706 876 aa4.3□□□□□ -1.72
GPCPD1-207ENST00000633552 UBTD1Q9HAC8 227 aa4.3□□□□□ -1.72
GPCPD1-207ENST00000633552 CLIC5Q9NZA1 410 aa4.3□□□□□ -1.72
GPCPD1-207ENST00000633552 TSPYL4Q9UJ04 414 aa4.3□□□□□ -1.72
GPCPD1-207ENST00000633552 ARHGEF40Q8TER5 1519 aa4.3□□□□□ -1.72
GPCPD1-207ENST00000633552 IGHV4OR15-8A0A075B7B6 117 aa4.29□□□□□ -1.72
GPCPD1-207ENST00000633552 SYNDIG1LA6NDD5 238 aa4.29□□□□□ -1.72
GPCPD1-207ENST00000633552 PAPSS1O43252 624 aaPredicted RBP4.29□□□□□ -1.72
GPCPD1-207ENST00000633552 ADAM20O43506 726 aa4.29□□□□□ -1.72
GPCPD1-207ENST00000633552 TIMM44O43615 452 aa4.29□□□□□ -1.72
GPCPD1-207ENST00000633552 FGF3P11487 239 aaPredicted RBP4.29□□□□□ -1.72
GPCPD1-207ENST00000633552 PRLRP16471 622 aa4.29□□□□□ -1.72
GPCPD1-207ENST00000633552 HSD17B4P51659 736 aa4.29□□□□□ -1.72
GPCPD1-207ENST00000633552 CTSCP53634 463 aa4.29□□□□□ -1.72
GPCPD1-207ENST00000633552 SPOCK1Q08629 439 aa4.29□□□□□ -1.72
GPCPD1-207ENST00000633552 GTF2H2Q13888 395 aa4.29□□□□□ -1.72
GPCPD1-207ENST00000633552 KEAP1Q14145 624 aa4.29□□□□□ -1.72
GPCPD1-207ENST00000633552 ZNF234Q14588 700 aa4.29□□□□□ -1.72
GPCPD1-207ENST00000633552 C9orf57Q5W0N0 161 aa4.29□□□□□ -1.72
GPCPD1-207ENST00000633552 LCN10Q6JVE6 187 aa4.29□□□□□ -1.72
GPCPD1-207ENST00000633552 SLC30A6Q6NXT4 461 aa4.29□□□□□ -1.72
GPCPD1-207ENST00000633552 GTF2H2CQ6P1K8 395 aa4.29□□□□□ -1.72
GPCPD1-207ENST00000633552 ZNF517Q6ZMY9 492 aaPredicted RBP4.29□□□□□ -1.72
GPCPD1-207ENST00000633552 INTS8Q75QN2 995 aaKnown RBP4.29□□□□□ -1.72
GPCPD1-207ENST00000633552 ARMC9Q7Z3E5 817 aa4.29□□□□□ -1.72
GPCPD1-207ENST00000633552 TMEM219Q86XT9 240 aa4.29□□□□□ -1.72
GPCPD1-207ENST00000633552 GCSAMQ8N6F7 178 aa4.29□□□□□ -1.72
GPCPD1-207ENST00000633552 POMGNT2Q8NAT1 580 aa4.29□□□□□ -1.72
GPCPD1-207ENST00000633552 TBC1D16Q8TBP0 767 aa4.29□□□□□ -1.72
GPCPD1-207ENST00000633552 LPGAT1Q92604 370 aa4.29□□□□□ -1.72
GPCPD1-207ENST00000633552 LRRC59Q96AG4 307 aaKnown RBP4.29□□□□□ -1.72
GPCPD1-207ENST00000633552 PHF21AQ96BD5 680 aa4.29□□□□□ -1.72
GPCPD1-207ENST00000633552 PTERQ96BW5 349 aa4.29□□□□□ -1.72
GPCPD1-207ENST00000633552 ERLEC1Q96DZ1 483 aa4.29□□□□□ -1.72
GPCPD1-207ENST00000633552 DUX5Q96PT3 197 aa4.29□□□□□ -1.72
GPCPD1-207ENST00000633552 NEURL2Q9BR09 285 aa4.29□□□□□ -1.72
GPCPD1-207ENST00000633552 MRPL1Q9BYD6 325 aaKnown RBP4.29□□□□□ -1.72
GPCPD1-207ENST00000633552 SPATC1LQ9H0A9 340 aa4.29□□□□□ -1.72
GPCPD1-207ENST00000633552 PLSCR4Q9NRQ2 329 aa4.29□□□□□ -1.72
GPCPD1-207ENST00000633552 NKIRAS2Q9NYR9 191 aa4.29□□□□□ -1.72
GPCPD1-207ENST00000633552 MARCH4Q9P2E8 410 aaPredicted RBP4.29□□□□□ -1.72
GPCPD1-207ENST00000633552 AMACRQ9UHK6 382 aa4.29□□□□□ -1.72
GPCPD1-207ENST00000633552 RALYQ9UKM9 306 aaKnown RBP4.29□□□□□ -1.72
GPCPD1-207ENST00000633552 CLEC18AA5D8T8 446 aa4.28□□□□□ -1.72
GPCPD1-207ENST00000633552 LILRA5A6NI73 299 aa4.28□□□□□ -1.72
GPCPD1-207ENST00000633552 C4orf47A7E2U8 309 aa4.28□□□□□ -1.72
GPCPD1-207ENST00000633552 SH2B2O14492 632 aaPredicted RBP4.28□□□□□ -1.72
GPCPD1-207ENST00000633552 ACOT8O14734 319 aa4.28□□□□□ -1.72
GPCPD1-207ENST00000633552 ADAMDEC1O15204 470 aa4.28□□□□□ -1.72
GPCPD1-207ENST00000633552 EIF3DO15371 548 aaKnown RBP eCLIP4.28□□□□□ -1.72
GPCPD1-207ENST00000633552 NDUFS4O43181 175 aa4.28□□□□□ -1.72
GPCPD1-207ENST00000633552 BUD23O43709 281 aaKnown RBP4.28□□□□□ -1.72
GPCPD1-207ENST00000633552 WDR1O75083 606 aa4.28□□□□□ -1.72
GPCPD1-207ENST00000633552 CAMTA2O94983 1202 aa4.28□□□□□ -1.72
GPCPD1-207ENST00000633552 BMP10O95393 424 aa4.28□□□□□ -1.72
GPCPD1-207ENST00000633552 FAM106CPP0CH98 169 aa4.28□□□□□ -1.72
GPCPD1-207ENST00000633552 TRIM21P19474 475 aaKnown RBP4.28□□□□□ -1.72
GPCPD1-207ENST00000633552 PSMC4P43686 418 aa4.28□□□□□ -1.72
GPCPD1-207ENST00000633552 CAPZA2P47755 286 aa4.28□□□□□ -1.72
GPCPD1-207ENST00000633552 BRWD1-AS2P59051 145 aa4.28□□□□□ -1.72
GPCPD1-207ENST00000633552 EEF1A1P68104 462 aaKnown RBP4.28□□□□□ -1.72
GPCPD1-207ENST00000633552 EEF1A2Q05639 463 aaKnown RBP4.28□□□□□ -1.72
GPCPD1-207ENST00000633552 CXCL9Q07325 125 aa4.28□□□□□ -1.72
GPCPD1-207ENST00000633552 COASYQ13057 564 aa4.28□□□□□ -1.72
GPCPD1-207ENST00000633552 GRAPQ13588 217 aa4.28□□□□□ -1.72
GPCPD1-207ENST00000633552 EEF1A1P5Q5VTE0 462 aa4.28□□□□□ -1.72
GPCPD1-207ENST00000633552 KRT79Q5XKE5 535 aa4.28□□□□□ -1.72
GPCPD1-207ENST00000633552 DHRS7BQ6IAN0 325 aaPredicted RBP4.28□□□□□ -1.72
GPCPD1-207ENST00000633552 TMEM211Q6ICI0 200 aa4.28□□□□□ -1.72
GPCPD1-207ENST00000633552 CAPRIN2Q6IMN6 1127 aaKnown RBP4.28□□□□□ -1.72
GPCPD1-207ENST00000633552 NAA16Q6N069 864 aaPredicted RBP4.28□□□□□ -1.72
GPCPD1-207ENST00000633552 FAM171BQ6P995 826 aa4.28□□□□□ -1.72
GPCPD1-207ENST00000633552 PRSS57Q6UWY2 283 aa4.28□□□□□ -1.72
GPCPD1-207ENST00000633552 GFRALQ6UXV0 394 aa4.28□□□□□ -1.72
GPCPD1-207ENST00000633552 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.28□□□□□ -1.72
GPCPD1-207ENST00000633552 PLEKHM3Q6ZWE6 761 aa4.28□□□□□ -1.72
GPCPD1-207ENST00000633552 LDB1Q86U70 411 aaPredicted RBP4.28□□□□□ -1.72
GPCPD1-207ENST00000633552 CEP97Q8IW35 865 aa4.28□□□□□ -1.72
GPCPD1-207ENST00000633552 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.28□□□□□ -1.72
GPCPD1-207ENST00000633552 GBGT1Q8N5D6 347 aa4.28□□□□□ -1.72
GPCPD1-207ENST00000633552 MINDY1Q8N5J2 469 aa4.28□□□□□ -1.72
GPCPD1-207ENST00000633552 SYT2Q8N9I0 419 aaPredicted RBP4.28□□□□□ -1.72
GPCPD1-207ENST00000633552 SLC38A9Q8NBW4 561 aa4.28□□□□□ -1.72
GPCPD1-207ENST00000633552 KCTD6Q8NC69 237 aa4.28□□□□□ -1.72
GPCPD1-207ENST00000633552 CLEC18CQ8NCF0 446 aa4.28□□□□□ -1.72
GPCPD1-207ENST00000633552 OR52I2Q8NH67 350 aa4.28□□□□□ -1.72
GPCPD1-207ENST00000633552 SPATA20Q8TB22 786 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms