RNA–Protein interactions for RNA: ENST00000628962.1

VPS8-228, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 5 BASIC

Gene VPS8, Length 207 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-228ENST00000628962 LETM2Q2VYF4 491 aa3.23□□□□□ -1.89
VPS8-228ENST00000628962 PCGF3Q3KNV8 242 aa3.23□□□□□ -1.89
VPS8-228ENST00000628962 PLK5Q496M5 336 aa3.23□□□□□ -1.89
VPS8-228ENST00000628962 CRY2Q49AN0 593 aa3.23□□□□□ -1.89
VPS8-228ENST00000628962 FAM76BQ5HYJ3 339 aa3.23□□□□□ -1.89
VPS8-228ENST00000628962 CST9LP1Q5W188 147 aa3.23□□□□□ -1.89
VPS8-228ENST00000628962 CES5AQ6NT32 575 aa3.23□□□□□ -1.89
VPS8-228ENST00000628962 CAVIN1Q6NZI2 390 aaKnown RBP3.23□□□□□ -1.89
VPS8-228ENST00000628962 LCTLQ6UWM7 567 aa3.23□□□□□ -1.89
VPS8-228ENST00000628962 LRIG3Q6UXM1 1119 aa3.23□□□□□ -1.89
VPS8-228ENST00000628962 CFAP77Q6ZQR2 320 aa3.23□□□□□ -1.89
VPS8-228ENST00000628962 SEPT14Q6ZU15 432 aa3.23□□□□□ -1.89
VPS8-228ENST00000628962 RAPH1Q70E73 1250 aa3.23□□□□□ -1.89
VPS8-228ENST00000628962 CYB5R4Q7L1T6 521 aa3.23□□□□□ -1.89
VPS8-228ENST00000628962 NRKQ7Z2Y5 1582 aa3.23□□□□□ -1.89
VPS8-228ENST00000628962 UNC45BQ8IWX7 931 aa3.23□□□□□ -1.89
VPS8-228ENST00000628962 CCDC13Q8IYE1 715 aa3.23□□□□□ -1.89
VPS8-228ENST00000628962 CCAR2Q8N163 923 aaKnown RBP3.23□□□□□ -1.89
VPS8-228ENST00000628962 CARNMT1Q8N4J0 409 aa3.23□□□□□ -1.89
VPS8-228ENST00000628962 RASSF8Q8NHQ8 419 aa3.23□□□□□ -1.89
VPS8-228ENST00000628962 TMEM174Q8WUU8 243 aa3.23□□□□□ -1.89
VPS8-228ENST00000628962 PTPRUQ92729 1446 aa3.23□□□□□ -1.89
VPS8-228ENST00000628962 INPP5DQ92835 1189 aa3.23□□□□□ -1.89
VPS8-228ENST00000628962 ATOH1Q92858 354 aaPredicted RBP3.23□□□□□ -1.89
VPS8-228ENST00000628962 FAM162AQ96A26 154 aa3.23□□□□□ -1.89
VPS8-228ENST00000628962 NAA11Q9BSU3 229 aaPredicted RBP3.23□□□□□ -1.89
VPS8-228ENST00000628962 FRMD8Q9BZ67 464 aaPredicted RBP3.23□□□□□ -1.89
VPS8-228ENST00000628962 HIPK3Q9H422 1215 aa3.23□□□□□ -1.89
VPS8-228ENST00000628962 PLEKHA4Q9H4M7 779 aa3.23□□□□□ -1.89
VPS8-228ENST00000628962 SLC28A3Q9HAS3 691 aa3.23□□□□□ -1.89
VPS8-228ENST00000628962 WSB2Q9NYS7 404 aaPredicted RBP3.23□□□□□ -1.89
VPS8-228ENST00000628962 FRMD4AQ9P2Q2 1039 aaPredicted RBP3.23□□□□□ -1.89
VPS8-228ENST00000628962 KIAA1107Q9UPP5 1409 aa3.23□□□□□ -1.89
VPS8-228ENST00000628962 PARD3Q8TEW0 1356 aa3.23□□□□□ -1.89
VPS8-228ENST00000628962 INO80Q9ULG1 1556 aaPredicted RBP3.22□□□□□ -1.89
VPS8-228ENST00000628962 TRAV34A0A0B4J273 112 aa3.22□□□□□ -1.89
VPS8-228ENST00000628962 A0A0B4J293 547 aa3.22□□□□□ -1.89
VPS8-228ENST00000628962 TCRBV21S2A2A0A5A6 115 aa3.22□□□□□ -1.89
VPS8-228ENST00000628962 FAM157AC9JC47 383 aa3.22□□□□□ -1.89
VPS8-228ENST00000628962 TMCC1O94876 653 aa3.22□□□□□ -1.89
VPS8-228ENST00000628962 PPP1R3DO95685 299 aa3.22□□□□□ -1.89
VPS8-228ENST00000628962 FTCDO95954 541 aa3.22□□□□□ -1.89
VPS8-228ENST00000628962 ERCC2P18074 760 aa3.22□□□□□ -1.89
VPS8-228ENST00000628962 TRIM21P19474 475 aaKnown RBP3.22□□□□□ -1.89
VPS8-228ENST00000628962 MC5RP33032 325 aa3.22□□□□□ -1.89
VPS8-228ENST00000628962 HNF4AP41235 474 aa3.22□□□□□ -1.89
VPS8-228ENST00000628962 CCR10P46092 362 aa3.22□□□□□ -1.89
VPS8-228ENST00000628962 CLCN5P51795 746 aa3.22□□□□□ -1.89
VPS8-228ENST00000628962 SLC18A2Q05940 514 aa3.22□□□□□ -1.89
VPS8-228ENST00000628962 SCN1BQ07699 218 aa3.22□□□□□ -1.89
VPS8-228ENST00000628962 CRYZQ08257 329 aaKnown RBP3.22□□□□□ -1.89
VPS8-228ENST00000628962 GRIK3Q13003 919 aa3.22□□□□□ -1.89
VPS8-228ENST00000628962 IL11RAQ14626 422 aa3.22□□□□□ -1.89
VPS8-228ENST00000628962 PGM5Q15124 567 aa3.22□□□□□ -1.89
VPS8-228ENST00000628962 E2F5Q15329 346 aa3.22□□□□□ -1.89
VPS8-228ENST00000628962 ZNF674Q2M3X9 581 aa3.22□□□□□ -1.89
VPS8-228ENST00000628962 C6orf10Q5SRN2 563 aa3.22□□□□□ -1.89
VPS8-228ENST00000628962 PRAMEF19Q5SWL8 479 aa3.22□□□□□ -1.89
VPS8-228ENST00000628962 C6orf141Q5SZD1 244 aa3.22□□□□□ -1.89
VPS8-228ENST00000628962 KRT79Q5XKE5 535 aa3.22□□□□□ -1.89
VPS8-228ENST00000628962 TBC1D9BQ66K14 1250 aa3.22□□□□□ -1.89
VPS8-228ENST00000628962 TRAT1Q6PIZ9 186 aa3.22□□□□□ -1.89
VPS8-228ENST00000628962 IGFN1Q86VF2 1251 aa3.22□□□□□ -1.89
VPS8-228ENST00000628962 CADM3Q8N126 398 aa3.22□□□□□ -1.89
VPS8-228ENST00000628962 ARL14EPQ8N8R7 260 aaPredicted RBP3.22□□□□□ -1.89
VPS8-228ENST00000628962 PRR26Q8N8Z3 221 aa3.22□□□□□ -1.89
VPS8-228ENST00000628962 HDAC7Q8WUI4 952 aa3.22□□□□□ -1.89
VPS8-228ENST00000628962 TAF15Q92804 592 aaKnown RBP eCLIP3.22□□□□□ -1.89
VPS8-228ENST00000628962 HES6Q96HZ4 224 aa3.22□□□□□ -1.89
VPS8-228ENST00000628962 HARBI1Q96MB7 349 aa3.22□□□□□ -1.89
VPS8-228ENST00000628962 CFAP57Q96MR6 1250 aa3.22□□□□□ -1.89
VPS8-228ENST00000628962 TMEM47Q9BQJ4 181 aa3.22□□□□□ -1.89
VPS8-228ENST00000628962 KRTAP4-3Q9BYR4 195 aa3.22□□□□□ -1.89
VPS8-228ENST00000628962 DNAI2Q9GZS0 605 aa3.22□□□□□ -1.89
VPS8-228ENST00000628962 TKTL2Q9H0I9 626 aa3.22□□□□□ -1.89
VPS8-228ENST00000628962 COPS7BQ9H9Q2 264 aaPredicted RBP3.22□□□□□ -1.89
VPS8-228ENST00000628962 TUBE1Q9UJT0 475 aa3.22□□□□□ -1.89
VPS8-228ENST00000628962 OSGIN1Q9UJX0 560 aa3.22□□□□□ -1.89
VPS8-228ENST00000628962 MMP24Q9Y5R2 645 aa3.22□□□□□ -1.89
VPS8-228ENST00000628962 MYOM1P52179 1685 aa3.22□□□□□ -1.89
VPS8-228ENST00000628962 GPATCH8Q9UKJ3 1502 aaKnown RBP3.22□□□□□ -1.89
VPS8-228ENST00000628962 CHD2O14647 1828 aaKnown RBP3.21□□□□□ -1.89
VPS8-228ENST00000628962 ADGRL3Q9HAR2 1447 aa3.21□□□□□ -1.9
VPS8-228ENST00000628962 SYCP2Q9BX26 1530 aa3.21□□□□□ -1.9
VPS8-228ENST00000628962 LOC102723996A0A087X1L8 192 aa3.21□□□□□ -1.9
VPS8-228ENST00000628962 A0A096LPK6 155 aa3.21□□□□□ -1.9
VPS8-228ENST00000628962 A0A0U1RQK1 487 aa3.21□□□□□ -1.9
VPS8-228ENST00000628962 ZNF320A2RRD8 509 aa3.21□□□□□ -1.9
VPS8-228ENST00000628962 GTPBP10A4D1E9 387 aaKnown RBP3.21□□□□□ -1.9
VPS8-228ENST00000628962 DPPA5A6NC42 116 aa3.21□□□□□ -1.9
VPS8-228ENST00000628962 DDTLA6NHG4 134 aaPredicted RBP3.21□□□□□ -1.9
VPS8-228ENST00000628962 HSPB2A8KAH6 182 aa3.21□□□□□ -1.9
VPS8-228ENST00000628962 H0YAE9 185 aa3.21□□□□□ -1.9
VPS8-228ENST00000628962 OGG1O15527 345 aa3.21□□□□□ -1.9
VPS8-228ENST00000628962 RNMTO43148 476 aaKnown RBP3.21□□□□□ -1.9
VPS8-228ENST00000628962 TADA2AO75478 443 aa3.21□□□□□ -1.9
VPS8-228ENST00000628962 TOMM70O94826 608 aa3.21□□□□□ -1.9
VPS8-228ENST00000628962 WNT1P04628 370 aa3.21□□□□□ -1.9
VPS8-228ENST00000628962 PTMAP06454 111 aaKnown RBP3.21□□□□□ -1.9
VPS8-228ENST00000628962 TFPIP10646 304 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms