RNA–Protein interactions for RNA: ENST00000626828.1

UBE3D-208, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5 BASIC

Gene UBE3D, Length 114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-208ENST00000626828 CCL22O00626 93 aa16.47■□□□□ 0.23
UBE3D-208ENST00000626828 LSSP48449 732 aa16.47■□□□□ 0.23
UBE3D-208ENST00000626828 CTSCP53634 463 aa16.47■□□□□ 0.23
UBE3D-208ENST00000626828 SARNPP82979 210 aaKnown RBP16.47■□□□□ 0.23
UBE3D-208ENST00000626828 HHEXQ03014 270 aa16.47■□□□□ 0.23
UBE3D-208ENST00000626828 CACNG1Q06432 222 aa16.47■□□□□ 0.23
UBE3D-208ENST00000626828 TRIP13Q15645 432 aaPredicted RBP16.47■□□□□ 0.23
UBE3D-208ENST00000626828 PLA2G4EQ3MJ16 856 aa16.47■□□□□ 0.23
UBE3D-208ENST00000626828 CCDC38Q502W7 563 aa16.47■□□□□ 0.23
UBE3D-208ENST00000626828 PCID2Q5JVF3 399 aa16.47■□□□□ 0.23
UBE3D-208ENST00000626828 FNBP1LQ5T0N5 605 aa16.47■□□□□ 0.23
UBE3D-208ENST00000626828 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.47■□□□□ 0.23
UBE3D-208ENST00000626828 TSTD2Q5T7W7 516 aa16.47■□□□□ 0.23
UBE3D-208ENST00000626828 AGAP9Q5VTM2 703 aa16.47■□□□□ 0.23
UBE3D-208ENST00000626828 PAPD7Q5XG87 772 aaKnown RBP16.47■□□□□ 0.23
UBE3D-208ENST00000626828 TTC27Q6P3X3 843 aa16.47■□□□□ 0.23
UBE3D-208ENST00000626828 MDM1Q8TC05 714 aa16.47■□□□□ 0.23
UBE3D-208ENST00000626828 PEX13Q92968 403 aa16.47■□□□□ 0.23
UBE3D-208ENST00000626828 SLC38A3Q99624 504 aa16.47■□□□□ 0.23
UBE3D-208ENST00000626828 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.47■□□□□ 0.23
UBE3D-208ENST00000626828 POLR1BQ9H9Y6 1135 aa16.47■□□□□ 0.23
UBE3D-208ENST00000626828 ZDHHC3Q9NYG2 299 aa16.47■□□□□ 0.23
UBE3D-208ENST00000626828 KCNK4Q9NYG8 393 aa16.47■□□□□ 0.23
UBE3D-208ENST00000626828 BFARQ9NZS9 450 aa16.47■□□□□ 0.23
UBE3D-208ENST00000626828 ZMIZ1Q9ULJ6 1067 aa16.47■□□□□ 0.23
UBE3D-208ENST00000626828 ANKRD11Q6UB99 2663 aaPredicted RBP16.46■□□□□ 0.23
UBE3D-208ENST00000626828 MGAT4DA6NG13 374 aa16.46■□□□□ 0.23
UBE3D-208ENST00000626828 PDZK1P1A8MUH7 402 aa16.46■□□□□ 0.23
UBE3D-208ENST00000626828 D6RAR5 112 aa16.46■□□□□ 0.23
UBE3D-208ENST00000626828 ZNF185O15231 689 aa16.46■□□□□ 0.23
UBE3D-208ENST00000626828 CASC3O15234 703 aaKnown RBP16.46■□□□□ 0.23
UBE3D-208ENST00000626828 CPNE6O95741 557 aa16.46■□□□□ 0.23
UBE3D-208ENST00000626828 ATP1B2P14415 290 aaPredicted RBP16.46■□□□□ 0.23
UBE3D-208ENST00000626828 TPSB2P20231 275 aa16.46■□□□□ 0.23
UBE3D-208ENST00000626828 CD1CP29017 333 aa16.46■□□□□ 0.23
UBE3D-208ENST00000626828 INHBCP55103 352 aa16.46■□□□□ 0.23
UBE3D-208ENST00000626828 GPLD1P80108 840 aa16.46■□□□□ 0.23
UBE3D-208ENST00000626828 DMPKQ09013 629 aa16.46■□□□□ 0.23
UBE3D-208ENST00000626828 GPS1Q13098 491 aa16.46■□□□□ 0.23
UBE3D-208ENST00000626828 TPSAB1Q15661 275 aa16.46■□□□□ 0.23
UBE3D-208ENST00000626828 AMZ1Q400G9 498 aa16.46■□□□□ 0.23
UBE3D-208ENST00000626828 LRRC8BQ6P9F7 803 aa16.46■□□□□ 0.23
UBE3D-208ENST00000626828 USP53Q70EK8 1073 aa16.46■□□□□ 0.23
UBE3D-208ENST00000626828 SERPINA9Q86WD7 417 aa16.46■□□□□ 0.23
UBE3D-208ENST00000626828 WDR36Q8NI36 951 aaKnown RBP16.46■□□□□ 0.23
UBE3D-208ENST00000626828 GRK7Q8WTQ7 553 aa16.46■□□□□ 0.23
UBE3D-208ENST00000626828 HDAC10Q969S8 669 aa16.46■□□□□ 0.23
UBE3D-208ENST00000626828 ATXN7L3BQ96GX2 97 aa16.46■□□□□ 0.23
UBE3D-208ENST00000626828 TTC1Q99614 292 aa16.46■□□□□ 0.23
UBE3D-208ENST00000626828 NAPGQ99747 312 aaPredicted RBP16.46■□□□□ 0.23
UBE3D-208ENST00000626828 DPYSL5Q9BPU6 564 aa16.46■□□□□ 0.23
UBE3D-208ENST00000626828 STRADBQ9C0K7 418 aa16.46■□□□□ 0.23
UBE3D-208ENST00000626828 CPNE7Q9UBL6 633 aa16.46■□□□□ 0.23
UBE3D-208ENST00000626828 ATXN7L1Q9ULK2 861 aaPredicted RBP16.46■□□□□ 0.23
UBE3D-208ENST00000626828 ZNF106Q9H2Y7 1883 aaKnown RBP16.46■□□□□ 0.22
UBE3D-208ENST00000626828 FRYQ5TBA9 3013 aa16.45■□□□□ 0.22
UBE3D-208ENST00000626828 IGHV1OR21-1A0A087WYE8 117 aa16.45■□□□□ 0.22
UBE3D-208ENST00000626828 CCDC187A0A096LP49 1063 aa16.45■□□□□ 0.22
UBE3D-208ENST00000626828 PHF2O75151 1096 aa16.45■□□□□ 0.22
UBE3D-208ENST00000626828 VIPP01282 170 aa16.45■□□□□ 0.22
UBE3D-208ENST00000626828 RPL10P27635 214 aaKnown RBP16.45■□□□□ 0.22
UBE3D-208ENST00000626828 CCKBRP32239 447 aa16.45■□□□□ 0.22
UBE3D-208ENST00000626828 SLC19A1P41440 591 aa16.45■□□□□ 0.22
UBE3D-208ENST00000626828 FNTAP49354 379 aa16.45■□□□□ 0.22
UBE3D-208ENST00000626828 CDKN1CP49918 316 aaPredicted RBP16.45■□□□□ 0.22
UBE3D-208ENST00000626828 ARSDP51689 593 aa16.45■□□□□ 0.22
UBE3D-208ENST00000626828 SESN2P58004 480 aaPredicted RBP16.45■□□□□ 0.22
UBE3D-208ENST00000626828 ZFP36L1Q07352 338 aaKnown RBP16.45■□□□□ 0.22
UBE3D-208ENST00000626828 BCL7AQ4VC05 210 aa16.45■□□□□ 0.22
UBE3D-208ENST00000626828 LYPLAL1Q5VWZ2 237 aa16.45■□□□□ 0.22
UBE3D-208ENST00000626828 METRNLQ641Q3 311 aa16.45■□□□□ 0.22
UBE3D-208ENST00000626828 DET1Q7L5Y6 550 aa16.45■□□□□ 0.22
UBE3D-208ENST00000626828 PROSER1Q86XN7 944 aa16.45■□□□□ 0.22
UBE3D-208ENST00000626828 BEND7Q8N7W2 519 aaPredicted RBP16.45■□□□□ 0.22
UBE3D-208ENST00000626828 PPHLN1Q8NEY8 458 aaKnown RBP16.45■□□□□ 0.22
UBE3D-208ENST00000626828 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.45■□□□□ 0.22
UBE3D-208ENST00000626828 LIN37Q96GY3 246 aaPredicted RBP16.45■□□□□ 0.22
UBE3D-208ENST00000626828 AHCYL2Q96HN2 611 aaKnown RBP16.45■□□□□ 0.22
UBE3D-208ENST00000626828 LINC00615Q96LM1 132 aaPredicted RBP16.45■□□□□ 0.22
UBE3D-208ENST00000626828 IL22Q9GZX6 179 aa16.45■□□□□ 0.22
UBE3D-208ENST00000626828 KCND1Q9NSA2 647 aa16.45■□□□□ 0.22
UBE3D-208ENST00000626828 SMARCAL1Q9NZC9 954 aa16.45■□□□□ 0.22
UBE3D-208ENST00000626828 SCHIP1Q9P0W5 487 aaPredicted RBP16.45■□□□□ 0.22
UBE3D-208ENST00000626828 ACSL5Q9ULC5 683 aa16.45■□□□□ 0.22
UBE3D-208ENST00000626828 TCAF1Q9Y4C2 921 aa16.45■□□□□ 0.22
UBE3D-208ENST00000626828 SAR1BQ9Y6B6 198 aa16.45■□□□□ 0.22
UBE3D-208ENST00000626828 IGLV3-16A0A075B6K0 115 aa16.44■□□□□ 0.22
UBE3D-208ENST00000626828 C17orf113A0A1B0GUU1 675 aa16.44■□□□□ 0.22
UBE3D-208ENST00000626828 CCDC78A2IDD5 438 aa16.44■□□□□ 0.22
UBE3D-208ENST00000626828 CCDC162PA2VCL2 907 aa16.44■□□□□ 0.22
UBE3D-208ENST00000626828 CTAGE9A4FU28 777 aa16.44■□□□□ 0.22
UBE3D-208ENST00000626828 TAF4O00268 1085 aa16.44■□□□□ 0.22
UBE3D-208ENST00000626828 MPOP05164 745 aa16.44■□□□□ 0.22
UBE3D-208ENST00000626828 ACRV1P26436 265 aa16.44■□□□□ 0.22
UBE3D-208ENST00000626828 PPARGP37231 505 aaPredicted RBP16.44■□□□□ 0.22
UBE3D-208ENST00000626828 HALP42357 657 aa16.44■□□□□ 0.22
UBE3D-208ENST00000626828 MAGEA6P43360 314 aa16.44■□□□□ 0.22
UBE3D-208ENST00000626828 VPS41P49754 854 aa16.44■□□□□ 0.22
UBE3D-208ENST00000626828 UBE2IP63279 158 aaKnown RBP16.44■□□□□ 0.22
UBE3D-208ENST00000626828 ACVR1Q04771 509 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms