RNA–Protein interactions for RNA: ENST00000625243.1

CHD2-203, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 1 (best)

Gene CHD2, Length 361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-203ENST00000625243 SDCCAG8Q86SQ7 713 aaPredicted RBP2.47□□□□□ -2.01
CHD2-203ENST00000625243 TSPAN33Q86UF1 283 aa2.47□□□□□ -2.01
CHD2-203ENST00000625243 CCDC190Q86UF4 302 aa2.47□□□□□ -2.01
CHD2-203ENST00000625243 GPR180Q86V85 440 aa2.47□□□□□ -2.01
CHD2-203ENST00000625243 LSMEM1Q8N8F7 131 aa2.47□□□□□ -2.01
CHD2-203ENST00000625243 HJURPQ8NCD3 748 aaPredicted RBP2.47□□□□□ -2.01
CHD2-203ENST00000625243 KCNH5Q8NCM2 988 aa2.47□□□□□ -2.01
CHD2-203ENST00000625243 OR1J2Q8NGS2 313 aa2.47□□□□□ -2.01
CHD2-203ENST00000625243 GSDMBQ8TAX9 411 aa2.47□□□□□ -2.01
CHD2-203ENST00000625243 ADGRG7Q96K78 797 aa2.47□□□□□ -2.01
CHD2-203ENST00000625243 QRFPRQ96P65 431 aa2.47□□□□□ -2.01
CHD2-203ENST00000625243 GAD1Q99259 594 aa2.47□□□□□ -2.01
CHD2-203ENST00000625243 MTERF1Q99551 399 aaKnown RBP2.47□□□□□ -2.01
CHD2-203ENST00000625243 SRSF8Q9BRL6 282 aaKnown RBP2.47□□□□□ -2.01
CHD2-203ENST00000625243 DCTN5Q9BTE1 182 aa2.47□□□□□ -2.01
CHD2-203ENST00000625243 APOL6Q9BWW8 343 aa2.47□□□□□ -2.01
CHD2-203ENST00000625243 ESRP2Q9H6T0 727 aaKnown RBP2.47□□□□□ -2.01
CHD2-203ENST00000625243 PCDH9Q9HC56 1237 aa2.47□□□□□ -2.01
CHD2-203ENST00000625243 CHMP1AQ9HD42 196 aaPredicted RBP2.47□□□□□ -2.01
CHD2-203ENST00000625243 PDE7BQ9NP56 450 aa2.47□□□□□ -2.01
CHD2-203ENST00000625243 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP2.47□□□□□ -2.01
CHD2-203ENST00000625243 SETD4Q9NVD3 440 aa2.47□□□□□ -2.01
CHD2-203ENST00000625243 MTMR10Q9NXD2 777 aa2.47□□□□□ -2.01
CHD2-203ENST00000625243 MCM9Q9NXL9 1143 aa2.47□□□□□ -2.01
CHD2-203ENST00000625243 STK26Q9P289 416 aa2.47□□□□□ -2.01
CHD2-203ENST00000625243 CFDP1Q9UEE9 299 aaPredicted RBP2.47□□□□□ -2.01
CHD2-203ENST00000625243 STK39Q9UEW8 545 aa2.47□□□□□ -2.01
CHD2-203ENST00000625243 NRBP1Q9UHY1 535 aa2.47□□□□□ -2.01
CHD2-203ENST00000625243 ARHGEF40Q8TER5 1519 aa2.47□□□□□ -2.01
CHD2-203ENST00000625243 SAA2-SAA4A0A096LPE2 208 aa2.46□□□□□ -2.02
CHD2-203ENST00000625243 hCG_1809904A0A1W2PP81 198 aa2.46□□□□□ -2.02
CHD2-203ENST00000625243 A0A1W2PPE2 198 aa2.46□□□□□ -2.02
CHD2-203ENST00000625243 A0A1W2PR64 198 aa2.46□□□□□ -2.02
CHD2-203ENST00000625243 OR2A25A4D2G3 310 aa2.46□□□□□ -2.02
CHD2-203ENST00000625243 C15orf62A8K5M9 175 aa2.46□□□□□ -2.02
CHD2-203ENST00000625243 H0YIN7 160 aa2.46□□□□□ -2.02
CHD2-203ENST00000625243 J3KR12 359 aa2.46□□□□□ -2.02
CHD2-203ENST00000625243 SH2B2O14492 632 aaPredicted RBP2.46□□□□□ -2.02
CHD2-203ENST00000625243 MAP2K7O14733 419 aa2.46□□□□□ -2.02
CHD2-203ENST00000625243 TIMM23O14925 209 aa2.46□□□□□ -2.02
CHD2-203ENST00000625243 P4HA2O15460 535 aa2.46□□□□□ -2.02
CHD2-203ENST00000625243 ZBTB43O43298 467 aa2.46□□□□□ -2.02
CHD2-203ENST00000625243 EDIL3O43854 480 aa2.46□□□□□ -2.02
CHD2-203ENST00000625243 EIF5BO60841 1220 aaKnown RBP2.46□□□□□ -2.02
CHD2-203ENST00000625243 ENTPD3O75355 529 aa2.46□□□□□ -2.02
CHD2-203ENST00000625243 ERAL1O75616 437 aaKnown RBP2.46□□□□□ -2.02
CHD2-203ENST00000625243 CSPG5O95196 566 aa2.46□□□□□ -2.02
CHD2-203ENST00000625243 ICAM1P05362 532 aa2.46□□□□□ -2.02
CHD2-203ENST00000625243 GNL1P36915 607 aaPredicted RBP2.46□□□□□ -2.02
CHD2-203ENST00000625243 IL15P40933 162 aaPredicted RBP2.46□□□□□ -2.02
CHD2-203ENST00000625243 EIF2S3P41091 472 aaKnown RBP2.46□□□□□ -2.02
CHD2-203ENST00000625243 CAPZA2P47755 286 aa2.46□□□□□ -2.02
CHD2-203ENST00000625243 HSD17B4P51659 736 aa2.46□□□□□ -2.02
CHD2-203ENST00000625243 GPR143P51810 404 aa2.46□□□□□ -2.02
CHD2-203ENST00000625243 TERF1P54274 439 aa2.46□□□□□ -2.02
CHD2-203ENST00000625243 PNLIPRP2P54317 469 aa2.46□□□□□ -2.02
CHD2-203ENST00000625243 KRTAP12-2P59991 146 aa2.46□□□□□ -2.02
CHD2-203ENST00000625243 AIMP1Q12904 312 aaKnown RBP2.46□□□□□ -2.02
CHD2-203ENST00000625243 TNFAIP1Q13829 316 aa2.46□□□□□ -2.02
CHD2-203ENST00000625243 BAATQ14032 418 aaPredicted RBP2.46□□□□□ -2.02
CHD2-203ENST00000625243 BECN1Q14457 450 aa2.46□□□□□ -2.02
CHD2-203ENST00000625243 PCLAFQ15004 111 aa2.46□□□□□ -2.02
CHD2-203ENST00000625243 RBBP5Q15291 538 aaKnown RBP2.46□□□□□ -2.02
CHD2-203ENST00000625243 DECR1Q16698 335 aa2.46□□□□□ -2.02
CHD2-203ENST00000625243 TMEM266Q2M3C6 531 aa2.46□□□□□ -2.02
CHD2-203ENST00000625243 EIF2S3LQ2VIR3 472 aaKnown RBP2.46□□□□□ -2.02
CHD2-203ENST00000625243 ATP13A5Q4VNC0 1218 aa2.46□□□□□ -2.02
CHD2-203ENST00000625243 XKR9Q5GH70 373 aa2.46□□□□□ -2.02
CHD2-203ENST00000625243 KRT79Q5XKE5 535 aa2.46□□□□□ -2.02
CHD2-203ENST00000625243 TRNP1Q6NT89 227 aa2.46□□□□□ -2.02
CHD2-203ENST00000625243 WDR73Q6P4I2 378 aa2.46□□□□□ -2.02
CHD2-203ENST00000625243 CCNI2Q6ZMN8 369 aaPredicted RBP2.46□□□□□ -2.02
CHD2-203ENST00000625243 CFAP77Q6ZQR2 320 aa2.46□□□□□ -2.02
CHD2-203ENST00000625243 SCYL3Q8IZE3 742 aa2.46□□□□□ -2.02
CHD2-203ENST00000625243 RNF113BQ8IZP6 322 aaKnown RBP2.46□□□□□ -2.02
CHD2-203ENST00000625243 NAGSQ8N159 534 aa2.46□□□□□ -2.02
CHD2-203ENST00000625243 TTC30BQ8N4P2 665 aa2.46□□□□□ -2.02
CHD2-203ENST00000625243 TSPAN14Q8NG11 270 aa2.46□□□□□ -2.02
CHD2-203ENST00000625243 RDM1Q8NG50 284 aa2.46□□□□□ -2.02
CHD2-203ENST00000625243 UTP15Q8TED0 518 aaKnown RBP2.46□□□□□ -2.02
CHD2-203ENST00000625243 TRPC4APQ8TEL6 797 aa2.46□□□□□ -2.02
CHD2-203ENST00000625243 PPP4R1Q8TF05 950 aa2.46□□□□□ -2.02
CHD2-203ENST00000625243 RND1Q92730 232 aa2.46□□□□□ -2.02
CHD2-203ENST00000625243 TAAR8Q969N4 342 aa2.46□□□□□ -2.02
CHD2-203ENST00000625243 SLC22A18Q96BI1 424 aa2.46□□□□□ -2.02
CHD2-203ENST00000625243 ERLEC1Q96DZ1 483 aa2.46□□□□□ -2.02
CHD2-203ENST00000625243 CDCA5Q96FF9 252 aa2.46□□□□□ -2.02
CHD2-203ENST00000625243 SCMH1Q96GD3 660 aa2.46□□□□□ -2.02
CHD2-203ENST00000625243 C3orf30Q96M34 536 aa2.46□□□□□ -2.02
CHD2-203ENST00000625243 DACH2Q96NX9 599 aa2.46□□□□□ -2.02
CHD2-203ENST00000625243 GCNAQ96QF7 691 aa2.46□□□□□ -2.02
CHD2-203ENST00000625243 SMC6Q96SB8 1091 aa2.46□□□□□ -2.02
CHD2-203ENST00000625243 RTN4RQ9BZR6 473 aa2.46□□□□□ -2.02
CHD2-203ENST00000625243 MMP28Q9H239 520 aa2.46□□□□□ -2.02
CHD2-203ENST00000625243 MMP27Q9H306 513 aa2.46□□□□□ -2.02
CHD2-203ENST00000625243 RAD21L1Q9H4I0 556 aa2.46□□□□□ -2.02
CHD2-203ENST00000625243 DENND2DQ9H6A0 471 aaPredicted RBP2.46□□□□□ -2.02
CHD2-203ENST00000625243 MMP25Q9NPA2 562 aa2.46□□□□□ -2.02
CHD2-203ENST00000625243 TAB2Q9NYJ8 693 aa2.46□□□□□ -2.02
CHD2-203ENST00000625243 BCCIPQ9P287 314 aaKnown RBP eCLIP2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms