RNA–Protein interactions for RNA: ENST00000624009.3

LINC00963-217, long intergenic non-protein coding RNA 963, humanhuman

TSL 5 BASIC

Gene LINC00963, Length 663 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-217ENST00000624009 CPNE7Q9UBL6 633 aa12.25□□□□□ -0.45
LINC00963-217ENST00000624009 ZNF148Q9UQR1 794 aa12.25□□□□□ -0.45
LINC00963-217ENST00000624009 KCNK6Q9Y257 313 aa12.25□□□□□ -0.45
LINC00963-217ENST00000624009 PRKAB1Q9Y478 270 aa12.25□□□□□ -0.45
LINC00963-217ENST00000624009 TRBV5-4A0A0C4DH59 114 aa12.24□□□□□ -0.45
LINC00963-217ENST00000624009 MROH6A6NGR9 719 aa12.24□□□□□ -0.45
LINC00963-217ENST00000624009 AP3B1O00203 1094 aa12.24□□□□□ -0.45
LINC00963-217ENST00000624009 EML2O95834 649 aa12.24□□□□□ -0.45
LINC00963-217ENST00000624009 GSTM1P09488 218 aa12.24□□□□□ -0.45
LINC00963-217ENST00000624009 RALBP11234 206 aa12.24□□□□□ -0.45
LINC00963-217ENST00000624009 ITGALP20701 1170 aa12.24□□□□□ -0.45
LINC00963-217ENST00000624009 UGT1A5P35504 534 aa12.24□□□□□ -0.45
LINC00963-217ENST00000624009 GSTM4Q03013 218 aa12.24□□□□□ -0.45
LINC00963-217ENST00000624009 CDH17Q12864 832 aa12.24□□□□□ -0.45
LINC00963-217ENST00000624009 SEMA5AQ13591 1074 aa12.24□□□□□ -0.45
LINC00963-217ENST00000624009 SIX1Q15475 284 aaPredicted RBP12.24□□□□□ -0.45
LINC00963-217ENST00000624009 BCL7AQ4VC05 210 aa12.24□□□□□ -0.45
LINC00963-217ENST00000624009 ARMC3Q5W041 872 aa12.24□□□□□ -0.45
LINC00963-217ENST00000624009 TMEM71Q6P5X7 295 aa12.24□□□□□ -0.45
LINC00963-217ENST00000624009 NLRP9Q7RTR0 991 aa12.24□□□□□ -0.45
LINC00963-217ENST00000624009 BEND7Q8N7W2 519 aaPredicted RBP12.24□□□□□ -0.45
LINC00963-217ENST00000624009 STYXQ8WUJ0 223 aa12.24□□□□□ -0.45
LINC00963-217ENST00000624009 ZFPM2Q8WW38 1151 aa12.24□□□□□ -0.45
LINC00963-217ENST00000624009 ATG4AQ8WYN0 398 aa12.24□□□□□ -0.45
LINC00963-217ENST00000624009 FOXP3Q9BZS1 431 aa12.24□□□□□ -0.45
LINC00963-217ENST00000624009 ASB8Q9H765 288 aa12.24□□□□□ -0.45
LINC00963-217ENST00000624009 EPB41L5Q9HCM4 733 aa12.24□□□□□ -0.45
LINC00963-217ENST00000624009 PRDM8Q9NQV8 689 aa12.24□□□□□ -0.45
LINC00963-217ENST00000624009 NLE1Q9NVX2 485 aaPredicted RBP12.24□□□□□ -0.45
LINC00963-217ENST00000624009 PAK5Q9P286 719 aa12.24□□□□□ -0.45
LINC00963-217ENST00000624009 SLC23A2Q9UGH3 650 aa12.24□□□□□ -0.45
LINC00963-217ENST00000624009 ATXN7L1Q9ULK2 861 aaPredicted RBP12.24□□□□□ -0.45
LINC00963-217ENST00000624009 JRKLQ9Y4A0 524 aa12.24□□□□□ -0.45
LINC00963-217ENST00000624009 LOXL2Q9Y4K0 774 aa12.24□□□□□ -0.45
LINC00963-217ENST00000624009 MN1Q10571 1320 aaPredicted RBP12.23□□□□□ -0.45
LINC00963-217ENST00000624009 HELZ2Q9BYK8 2649 aaKnown RBP12.23□□□□□ -0.45
LINC00963-217ENST00000624009 IGLV3-16A0A075B6K0 115 aa12.23□□□□□ -0.45
LINC00963-217ENST00000624009 IGHV5-10-1A0A0J9YXX1 117 aa12.23□□□□□ -0.45
LINC00963-217ENST00000624009 C17orf113A0A1B0GUU1 675 aa12.23□□□□□ -0.45
LINC00963-217ENST00000624009 GOLGA6L3A6NEY3 463 aa12.23□□□□□ -0.45
LINC00963-217ENST00000624009 MGAT4DA6NG13 374 aa12.23□□□□□ -0.45
LINC00963-217ENST00000624009 CFAP99D6REC4 459 aa12.23□□□□□ -0.45
LINC00963-217ENST00000624009 CASC3O15234 703 aaKnown RBP12.23□□□□□ -0.45
LINC00963-217ENST00000624009 TOX3O15405 576 aaPredicted RBP12.23□□□□□ -0.45
LINC00963-217ENST00000624009 UGT1A9O60656 530 aa12.23□□□□□ -0.45
LINC00963-217ENST00000624009 MTX2O75431 263 aa12.23□□□□□ -0.45
LINC00963-217ENST00000624009 TNFSF15O95150 251 aa12.23□□□□□ -0.45
LINC00963-217ENST00000624009 GAS8O95995 478 aa12.23□□□□□ -0.45
LINC00963-217ENST00000624009 JMJD7P0C870 316 aa12.23□□□□□ -0.45
LINC00963-217ENST00000624009 UGT1A6P19224 532 aa12.23□□□□□ -0.45
LINC00963-217ENST00000624009 MSH3P20585 1137 aa12.23□□□□□ -0.45
LINC00963-217ENST00000624009 UGT1A1P22309 533 aa12.23□□□□□ -0.45
LINC00963-217ENST00000624009 UGT1A4P22310 534 aa12.23□□□□□ -0.45
LINC00963-217ENST00000624009 UGT1A3P35503 534 aa12.23□□□□□ -0.45
LINC00963-217ENST00000624009 TLE3Q04726 772 aa12.23□□□□□ -0.45
LINC00963-217ENST00000624009 SKIDA1Q1XH10 827 aa12.23□□□□□ -0.45
LINC00963-217ENST00000624009 AMZ1Q400G9 498 aa12.23□□□□□ -0.45
LINC00963-217ENST00000624009 ZNF648Q5T619 568 aaPredicted RBP12.23□□□□□ -0.45
LINC00963-217ENST00000624009 METRNLQ641Q3 311 aa12.23□□□□□ -0.45
LINC00963-217ENST00000624009 CRTC3Q6UUV7 619 aa12.23□□□□□ -0.45
LINC00963-217ENST00000624009 ZNF574Q6ZN55 896 aaPredicted RBP12.23□□□□□ -0.45
LINC00963-217ENST00000624009 TMEM26Q6ZUK4 368 aa12.23□□□□□ -0.45
LINC00963-217ENST00000624009 TMPRSS9Q7Z410 1059 aa12.23□□□□□ -0.45
LINC00963-217ENST00000624009 NXPE1Q8N323 547 aa12.23□□□□□ -0.45
LINC00963-217ENST00000624009 CCDC89Q8N998 374 aa12.23□□□□□ -0.45
LINC00963-217ENST00000624009 RASGEF1AQ8N9B8 481 aa12.23□□□□□ -0.45
LINC00963-217ENST00000624009 AGBL5Q8NDL9 886 aa12.23□□□□□ -0.45
LINC00963-217ENST00000624009 SNRNP27Q8WVK2 155 aaKnown RBP12.23□□□□□ -0.45
LINC00963-217ENST00000624009 KCNE4Q8WWG9 221 aa12.23□□□□□ -0.45
LINC00963-217ENST00000624009 AHCYL2Q96HN2 611 aaKnown RBP12.23□□□□□ -0.45
LINC00963-217ENST00000624009 SGSM3Q96HU1 749 aa12.23□□□□□ -0.45
LINC00963-217ENST00000624009 RANBP9Q96S59 729 aa12.23□□□□□ -0.45
LINC00963-217ENST00000624009 APOL2Q9BQE5 337 aa12.23□□□□□ -0.45
LINC00963-217ENST00000624009 NUDT22Q9BRQ3 303 aa12.23□□□□□ -0.45
LINC00963-217ENST00000624009 RAB33BQ9H082 229 aa12.23□□□□□ -0.45
LINC00963-217ENST00000624009 OSGEPL1Q9H4B0 414 aa12.23□□□□□ -0.45
LINC00963-217ENST00000624009 UGT1A7Q9HAW7 530 aa12.23□□□□□ -0.45
LINC00963-217ENST00000624009 UGT1A10Q9HAW8 530 aa12.23□□□□□ -0.45
LINC00963-217ENST00000624009 UGT1A8Q9HAW9 530 aa12.23□□□□□ -0.45
LINC00963-217ENST00000624009 ARFGAP3Q9NP61 516 aa12.23□□□□□ -0.45
LINC00963-217ENST00000624009 EIF2B3Q9NR50 452 aaKnown RBP12.23□□□□□ -0.45
LINC00963-217ENST00000624009 FKBPLQ9UIM3 349 aa12.23□□□□□ -0.45
LINC00963-217ENST00000624009 ACSL5Q9ULC5 683 aa12.23□□□□□ -0.45
LINC00963-217ENST00000624009 TTC7AQ9ULT0 858 aaPredicted RBP12.23□□□□□ -0.45
LINC00963-217ENST00000624009 LHX6Q9UPM6 363 aa12.23□□□□□ -0.45
LINC00963-217ENST00000624009 PCDHGA3Q9Y5H0 932 aa12.23□□□□□ -0.45
LINC00963-217ENST00000624009 SPTBP11277 2137 aa12.23□□□□□ -0.45
LINC00963-217ENST00000624009 HEATR9A2RTY3 570 aa12.22□□□□□ -0.45
LINC00963-217ENST00000624009 B4E171 279 aa12.22□□□□□ -0.45
LINC00963-217ENST00000624009 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.22□□□□□ -0.45
LINC00963-217ENST00000624009 QSOX1O00391 747 aa12.22□□□□□ -0.45
LINC00963-217ENST00000624009 BUD23O43709 281 aaKnown RBP12.22□□□□□ -0.45
LINC00963-217ENST00000624009 SNX2O60749 519 aa12.22□□□□□ -0.45
LINC00963-217ENST00000624009 POP7O75817 140 aaKnown RBP12.22□□□□□ -0.45
LINC00963-217ENST00000624009 VIPP01282 170 aa12.22□□□□□ -0.45
LINC00963-217ENST00000624009 FGGP02679 453 aa12.22□□□□□ -0.45
LINC00963-217ENST00000624009 ANKRD34CP0C6C1 535 aa12.22□□□□□ -0.45
LINC00963-217ENST00000624009 BRAFP15056 766 aa12.22□□□□□ -0.45
LINC00963-217ENST00000624009 MSNP26038 577 aaKnown RBP12.22□□□□□ -0.45
LINC00963-217ENST00000624009 CSF2RBP32927 897 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms