RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 COMMD8Q9NX08 183 aa13.97□□□□□ -0.17
LDB3-209ENST00000623056 DNAJB9Q9UBS3 223 aa13.97□□□□□ -0.17
LDB3-209ENST00000623056 SUN2Q9UH99 717 aa13.97□□□□□ -0.17
LDB3-209ENST00000623056 WDR90Q96KV7 1748 aa13.97□□□□□ -0.17
LDB3-209ENST00000623056 LOC100130705A0A1B0GUX0 176 aa13.97□□□□□ -0.17
LDB3-209ENST00000623056 FAM234BA2RU67 622 aa13.97□□□□□ -0.17
LDB3-209ENST00000623056 TTC34A8MYJ7 566 aa13.97□□□□□ -0.17
LDB3-209ENST00000623056 SLC7A4O43246 635 aa13.97□□□□□ -0.17
LDB3-209ENST00000623056 XPNPEP2O43895 674 aa13.97□□□□□ -0.17
LDB3-209ENST00000623056 GGT1P19440 569 aa13.97□□□□□ -0.17
LDB3-209ENST00000623056 LILRA4P59901 499 aa13.97□□□□□ -0.17
LDB3-209ENST00000623056 IFITM2Q01629 132 aa13.97□□□□□ -0.17
LDB3-209ENST00000623056 CDC20Q12834 499 aa13.97□□□□□ -0.17
LDB3-209ENST00000623056 SLC13A2Q13183 592 aa13.97□□□□□ -0.17
LDB3-209ENST00000623056 LAPTM5Q13571 262 aa13.97□□□□□ -0.17
LDB3-209ENST00000623056 TTLL4Q14679 1199 aa13.97□□□□□ -0.17
LDB3-209ENST00000623056 ACOX1Q15067 660 aa13.97□□□□□ -0.17
LDB3-209ENST00000623056 CARTPTQ16568 116 aa13.97□□□□□ -0.17
LDB3-209ENST00000623056 NKG7Q16617 165 aa13.97□□□□□ -0.17
LDB3-209ENST00000623056 FBXO48Q5FWF7 155 aa13.97□□□□□ -0.17
LDB3-209ENST00000623056 CATSPEREQ5SY80 951 aa13.97□□□□□ -0.17
LDB3-209ENST00000623056 SCIMPQ6UWF3 145 aa13.97□□□□□ -0.17
LDB3-209ENST00000623056 ARL10Q8N8L6 244 aa13.97□□□□□ -0.17
LDB3-209ENST00000623056 Q8N9G6 341 aaPredicted RBP13.97□□□□□ -0.17
LDB3-209ENST00000623056 RORBQ92753 470 aa13.97□□□□□ -0.17
LDB3-209ENST00000623056 PPM1MQ96MI6 270 aa13.97□□□□□ -0.17
LDB3-209ENST00000623056 ATOH8Q96SQ7 321 aa13.97□□□□□ -0.17
LDB3-209ENST00000623056 MFSD1Q9H3U5 465 aa13.97□□□□□ -0.17
LDB3-209ENST00000623056 CPNE5Q9HCH3 593 aa13.97□□□□□ -0.17
LDB3-209ENST00000623056 TMEM30AQ9NV96 361 aa13.97□□□□□ -0.17
LDB3-209ENST00000623056 USE1Q9NZ43 259 aa13.97□□□□□ -0.17
LDB3-209ENST00000623056 NUAK1O60285 661 aa13.96□□□□□ -0.17
LDB3-209ENST00000623056 CST1P01037 141 aa13.96□□□□□ -0.17
LDB3-209ENST00000623056 NPPAP01160 153 aa13.96□□□□□ -0.17
LDB3-209ENST00000623056 NTRK1P04629 796 aa13.96□□□□□ -0.17
LDB3-209ENST00000623056 NKX2-5P52952 324 aaPredicted RBP13.96□□□□□ -0.17
LDB3-209ENST00000623056 ARHGAP1Q07960 439 aa13.96□□□□□ -0.17
LDB3-209ENST00000623056 KCTD2Q14681 263 aa13.96□□□□□ -0.17
LDB3-209ENST00000623056 XKR7Q5GH72 579 aa13.96□□□□□ -0.17
LDB3-209ENST00000623056 ZNF691Q5VV52 312 aa13.96□□□□□ -0.17
LDB3-209ENST00000623056 C9orf131Q5VYM1 1079 aa13.96□□□□□ -0.17
LDB3-209ENST00000623056 WSCD1Q658N2 575 aa13.96□□□□□ -0.17
LDB3-209ENST00000623056 ZNF549Q6P9A3 640 aa13.96□□□□□ -0.17
LDB3-209ENST00000623056 ENPP6Q6UWR7 440 aa13.96□□□□□ -0.17
LDB3-209ENST00000623056 DLEU7Q6UYE1 221 aa13.96□□□□□ -0.17
LDB3-209ENST00000623056 NEK10Q6ZWH5 1172 aa13.96□□□□□ -0.17
LDB3-209ENST00000623056 BHLHA9Q7RTU4 235 aa13.96□□□□□ -0.17
LDB3-209ENST00000623056 ABI1Q8IZP0 508 aa13.96□□□□□ -0.17
LDB3-209ENST00000623056 TOP6BLQ8N6T0 577 aa13.96□□□□□ -0.17
LDB3-209ENST00000623056 ATP6V0D2Q8N8Y2 350 aa13.96□□□□□ -0.17
LDB3-209ENST00000623056 ZMIZ2Q8NF64 920 aa13.96□□□□□ -0.17
LDB3-209ENST00000623056 PSMA8Q8TAA3 256 aa13.96□□□□□ -0.17
LDB3-209ENST00000623056 YIPF6Q96EC8 236 aa13.96□□□□□ -0.17
LDB3-209ENST00000623056 TXNDC15Q96J42 360 aa13.96□□□□□ -0.17
LDB3-209ENST00000623056 TMEM209Q96SK2 561 aa13.96□□□□□ -0.17
LDB3-209ENST00000623056 RBM4BQ9BQ04 359 aaKnown RBP13.96□□□□□ -0.17
LDB3-209ENST00000623056 RBM4Q9BWF3 364 aaKnown RBP13.96□□□□□ -0.17
LDB3-209ENST00000623056 HOXD1Q9GZZ0 328 aa13.96□□□□□ -0.17
LDB3-209ENST00000623056 SMOC2Q9H3U7 446 aa13.96□□□□□ -0.17
LDB3-209ENST00000623056 ARNT2Q9HBZ2 717 aa13.96□□□□□ -0.17
LDB3-209ENST00000623056 CRTAC1Q9NQ79 661 aa13.96□□□□□ -0.17
LDB3-209ENST00000623056 ADARB2Q9NS39 739 aaKnown RBP13.96□□□□□ -0.17
LDB3-209ENST00000623056 NDFIP2Q9NV92 336 aa13.96□□□□□ -0.17
LDB3-209ENST00000623056 ZIM2Q9NZV7 527 aa13.96□□□□□ -0.17
LDB3-209ENST00000623056 INTS6Q9UL03 887 aaKnown RBP13.96□□□□□ -0.17
LDB3-209ENST00000623056 PCDHGB1Q9Y5G3 927 aa13.96□□□□□ -0.17
LDB3-209ENST00000623056 PPP2R3BQ9Y5P8 575 aa13.96□□□□□ -0.17
LDB3-209ENST00000623056 PDCD11Q14690 1871 aaKnown RBP13.96□□□□□ -0.18
LDB3-209ENST00000623056 UNCXA6NJT0 531 aa13.96□□□□□ -0.18
LDB3-209ENST00000623056 SYCE1LA8MT33 242 aa13.96□□□□□ -0.18
LDB3-209ENST00000623056 SNX2O60749 519 aa13.96□□□□□ -0.18
LDB3-209ENST00000623056 SEC24AO95486 1093 aa13.96□□□□□ -0.18
LDB3-209ENST00000623056 ACVR2AP27037 513 aa13.96□□□□□ -0.18
LDB3-209ENST00000623056 GRK3P35626 688 aa13.96□□□□□ -0.18
LDB3-209ENST00000623056 MAP2K4P45985 399 aa13.96□□□□□ -0.18
LDB3-209ENST00000623056 PPP5CP53041 499 aa13.96□□□□□ -0.18
LDB3-209ENST00000623056 FPGSQ05932 587 aa13.96□□□□□ -0.18
LDB3-209ENST00000623056 SPESP1Q6UW49 350 aa13.96□□□□□ -0.18
LDB3-209ENST00000623056 MOB2Q70IA6 237 aa13.96□□□□□ -0.18
LDB3-209ENST00000623056 P2RY8Q86VZ1 359 aa13.96□□□□□ -0.18
LDB3-209ENST00000623056 OR2T11Q8NH01 316 aa13.96□□□□□ -0.18
LDB3-209ENST00000623056 RHEBL1Q8TAI7 183 aa13.96□□□□□ -0.18
LDB3-209ENST00000623056 FBXO30Q8TB52 745 aa13.96□□□□□ -0.18
LDB3-209ENST00000623056 CNIH3Q8TBE1 160 aa13.96□□□□□ -0.18
LDB3-209ENST00000623056 PROKR1Q8TCW9 393 aa13.96□□□□□ -0.18
LDB3-209ENST00000623056 MCOLN3Q8TDD5 553 aa13.96□□□□□ -0.18
LDB3-209ENST00000623056 HTRA1Q92743 480 aa13.96□□□□□ -0.18
LDB3-209ENST00000623056 DACH2Q96NX9 599 aa13.96□□□□□ -0.18
LDB3-209ENST00000623056 ZNF300Q96RE9 604 aaPredicted RBP13.96□□□□□ -0.18
LDB3-209ENST00000623056 NDEL1Q9GZM8 345 aa13.96□□□□□ -0.18
LDB3-209ENST00000623056 SP140LQ9H930 580 aa13.96□□□□□ -0.18
LDB3-209ENST00000623056 SMPD4Q9NXE4 827 aa13.96□□□□□ -0.18
LDB3-209ENST00000623056 UTS2RQ9UKP6 389 aa13.96□□□□□ -0.18
LDB3-209ENST00000623056 SUPT3HB4E1H0 165 aa13.95□□□□□ -0.18
LDB3-209ENST00000623056 HS6ST1O60243 411 aa13.95□□□□□ -0.18
LDB3-209ENST00000623056 PAPSS2O95340 614 aaPredicted RBP13.95□□□□□ -0.18
LDB3-209ENST00000623056 NDST3O95803 873 aa13.95□□□□□ -0.18
LDB3-209ENST00000623056 CCDC159P0C7I6 412 aa13.95□□□□□ -0.18
LDB3-209ENST00000623056 ZNF37AP17032 561 aaPredicted RBP13.95□□□□□ -0.18
LDB3-209ENST00000623056 PRDX3P30048 256 aaKnown RBP13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms