RNA–Protein interactions for RNA: ENST00000622836.1

PCDHGC3-208, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3

Gene PCDHGC3, Length 795 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-208ENST00000622836 C3orf38Q5JPI3 329 aa13.75□□□□□ -0.21
PCDHGC3-208ENST00000622836 FOXR1Q6PIV2 292 aa13.75□□□□□ -0.21
PCDHGC3-208ENST00000622836 NLRP9Q7RTR0 991 aa13.75□□□□□ -0.21
PCDHGC3-208ENST00000622836 ZNF761Q86XN6 746 aaPredicted RBP13.75□□□□□ -0.21
PCDHGC3-208ENST00000622836 AVL9Q8NBF6 648 aa13.75□□□□□ -0.21
PCDHGC3-208ENST00000622836 NAT14Q8WUY8 206 aa13.75□□□□□ -0.21
PCDHGC3-208ENST00000622836 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.75□□□□□ -0.21
PCDHGC3-208ENST00000622836 SH3KBP1Q96B97 665 aa13.75□□□□□ -0.21
PCDHGC3-208ENST00000622836 GRAMD1AQ96CP6 724 aa13.75□□□□□ -0.21
PCDHGC3-208ENST00000622836 ATXN7L3BQ96GX2 97 aa13.75□□□□□ -0.21
PCDHGC3-208ENST00000622836 RANBP9Q96S59 729 aa13.75□□□□□ -0.21
PCDHGC3-208ENST00000622836 EPB41L5Q9HCM4 733 aa13.75□□□□□ -0.21
PCDHGC3-208ENST00000622836 BFARQ9NZS9 450 aa13.75□□□□□ -0.21
PCDHGC3-208ENST00000622836 FAM8A1Q9UBU6 413 aa13.75□□□□□ -0.21
PCDHGC3-208ENST00000622836 ZNF106Q9H2Y7 1883 aaKnown RBP13.75□□□□□ -0.21
PCDHGC3-208ENST00000622836 UNC13CQ8NB66 2214 aa13.74□□□□□ -0.21
PCDHGC3-208ENST00000622836 TMX2-CTNND1H3BSU7 103 aa13.74□□□□□ -0.21
PCDHGC3-208ENST00000622836 H7C0S8 307 aa13.74□□□□□ -0.21
PCDHGC3-208ENST00000622836 KCNJ13O60928 360 aa13.74□□□□□ -0.21
PCDHGC3-208ENST00000622836 VIPP01282 170 aa13.74□□□□□ -0.21
PCDHGC3-208ENST00000622836 MPOP05164 745 aa13.74□□□□□ -0.21
PCDHGC3-208ENST00000622836 TPSB2P20231 275 aa13.74□□□□□ -0.21
PCDHGC3-208ENST00000622836 ACRV1P26436 265 aa13.74□□□□□ -0.21
PCDHGC3-208ENST00000622836 MAPK9P45984 424 aa13.74□□□□□ -0.21
PCDHGC3-208ENST00000622836 FNTAP49354 379 aa13.74□□□□□ -0.21
PCDHGC3-208ENST00000622836 CDKN1CP49918 316 aaPredicted RBP13.74□□□□□ -0.21
PCDHGC3-208ENST00000622836 INHBCP55103 352 aa13.74□□□□□ -0.21
PCDHGC3-208ENST00000622836 GABREP78334 506 aa13.74□□□□□ -0.21
PCDHGC3-208ENST00000622836 PRAMEP78395 509 aa13.74□□□□□ -0.21
PCDHGC3-208ENST00000622836 CDK16Q00536 496 aa13.74□□□□□ -0.21
PCDHGC3-208ENST00000622836 B4GALNT1Q00973 533 aa13.74□□□□□ -0.21
PCDHGC3-208ENST00000622836 TPSAB1Q15661 275 aa13.74□□□□□ -0.21
PCDHGC3-208ENST00000622836 PCID2Q5JVF3 399 aa13.74□□□□□ -0.21
PCDHGC3-208ENST00000622836 TSTD2Q5T7W7 516 aa13.74□□□□□ -0.21
PCDHGC3-208ENST00000622836 AFTPHQ6ULP2 937 aa13.74□□□□□ -0.21
PCDHGC3-208ENST00000622836 USP53Q70EK8 1073 aa13.74□□□□□ -0.21
PCDHGC3-208ENST00000622836 ZNF438Q7Z4V0 828 aa13.74□□□□□ -0.21
PCDHGC3-208ENST00000622836 C11orf96Q7Z7L8 435 aa13.74□□□□□ -0.21
PCDHGC3-208ENST00000622836 PIM3Q86V86 326 aa13.74□□□□□ -0.21
PCDHGC3-208ENST00000622836 SERPINA9Q86WD7 417 aa13.74□□□□□ -0.21
PCDHGC3-208ENST00000622836 BEND7Q8N7W2 519 aaPredicted RBP13.74□□□□□ -0.21
PCDHGC3-208ENST00000622836 OR6P1Q8NGX9 317 aa13.74□□□□□ -0.21
PCDHGC3-208ENST00000622836 OR10G6Q8NH81 332 aa13.74□□□□□ -0.21
PCDHGC3-208ENST00000622836 CXorf40BQ96DE9 158 aa13.74□□□□□ -0.21
PCDHGC3-208ENST00000622836 TMEM74Q96NL1 305 aa13.74□□□□□ -0.21
PCDHGC3-208ENST00000622836 TTC1Q99614 292 aa13.74□□□□□ -0.21
PCDHGC3-208ENST00000622836 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.74□□□□□ -0.21
PCDHGC3-208ENST00000622836 FOXP3Q9BZS1 431 aa13.74□□□□□ -0.21
PCDHGC3-208ENST00000622836 STRADBQ9C0K7 418 aa13.74□□□□□ -0.21
PCDHGC3-208ENST00000622836 IL22Q9GZX6 179 aa13.74□□□□□ -0.21
PCDHGC3-208ENST00000622836 RDH14Q9HBH5 336 aa13.74□□□□□ -0.21
PCDHGC3-208ENST00000622836 SARS2Q9NP81 518 aaKnown RBP13.74□□□□□ -0.21
PCDHGC3-208ENST00000622836 ZDHHC3Q9NYG2 299 aa13.74□□□□□ -0.21
PCDHGC3-208ENST00000622836 CPNE7Q9UBL6 633 aa13.74□□□□□ -0.21
PCDHGC3-208ENST00000622836 ZMIZ1Q9ULJ6 1067 aa13.74□□□□□ -0.21
PCDHGC3-208ENST00000622836 TCAF1Q9Y4C2 921 aa13.74□□□□□ -0.21
PCDHGC3-208ENST00000622836 ENTPD2Q9Y5L3 495 aa13.74□□□□□ -0.21
PCDHGC3-208ENST00000622836 SAR1BQ9Y6B6 198 aa13.74□□□□□ -0.21
PCDHGC3-208ENST00000622836 DNMT3AQ9Y6K1 912 aaPredicted RBP13.74□□□□□ -0.21
PCDHGC3-208ENST00000622836 EPG5Q9HCE0 2579 aa13.74□□□□□ -0.21
PCDHGC3-208ENST00000622836 BPTFQ12830 3046 aa13.73□□□□□ -0.21
PCDHGC3-208ENST00000622836 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.73□□□□□ -0.21
PCDHGC3-208ENST00000622836 A6NCN8 305 aa13.73□□□□□ -0.21
PCDHGC3-208ENST00000622836 OR51F1A6NGY5 319 aa13.73□□□□□ -0.21
PCDHGC3-208ENST00000622836 AGAP14A8MT82 685 aa13.73□□□□□ -0.21
PCDHGC3-208ENST00000622836 AGRPO00253 132 aa13.73□□□□□ -0.21
PCDHGC3-208ENST00000622836 B4GAT1O43505 415 aa13.73□□□□□ -0.21
PCDHGC3-208ENST00000622836 CPNE6O95741 557 aa13.73□□□□□ -0.21
PCDHGC3-208ENST00000622836 ATP1B2P14415 290 aaPredicted RBP13.73□□□□□ -0.21
PCDHGC3-208ENST00000622836 PAFAH1B1P43034 410 aa13.73□□□□□ -0.21
PCDHGC3-208ENST00000622836 NPY2RP49146 381 aa13.73□□□□□ -0.21
PCDHGC3-208ENST00000622836 ARSDP51689 593 aa13.73□□□□□ -0.21
PCDHGC3-208ENST00000622836 CRADDP78560 199 aa13.73□□□□□ -0.21
PCDHGC3-208ENST00000622836 NFE2L1Q14494 772 aa13.73□□□□□ -0.21
PCDHGC3-208ENST00000622836 PHF19Q5T6S3 580 aa13.73□□□□□ -0.21
PCDHGC3-208ENST00000622836 NKAIN2Q5VXU1 208 aa13.73□□□□□ -0.21
PCDHGC3-208ENST00000622836 PAPD7Q5XG87 772 aaKnown RBP13.73□□□□□ -0.21
PCDHGC3-208ENST00000622836 CASC4Q6P4E1 433 aa13.73□□□□□ -0.21
PCDHGC3-208ENST00000622836 B3GNT8Q7Z7M8 397 aa13.73□□□□□ -0.21
PCDHGC3-208ENST00000622836 KDF1Q8NAX2 398 aaPredicted RBP13.73□□□□□ -0.21
PCDHGC3-208ENST00000622836 OR13J1Q8NGT2 312 aa13.73□□□□□ -0.21
PCDHGC3-208ENST00000622836 HDAC10Q969S8 669 aa13.73□□□□□ -0.21
PCDHGC3-208ENST00000622836 VPS37BQ9H9H4 285 aa13.73□□□□□ -0.21
PCDHGC3-208ENST00000622836 SCHIP1Q9P0W5 487 aaPredicted RBP13.73□□□□□ -0.21
PCDHGC3-208ENST00000622836 SLC2A6Q9UGQ3 507 aa13.73□□□□□ -0.21
PCDHGC3-208ENST00000622836 ANAPC5Q9UJX4 755 aa13.73□□□□□ -0.21
PCDHGC3-208ENST00000622836 SATB2Q9UPW6 733 aa13.73□□□□□ -0.21
PCDHGC3-208ENST00000622836 IGHV1OR21-1A0A087WYE8 117 aa13.72□□□□□ -0.21
PCDHGC3-208ENST00000622836 TRBV5-4A0A0C4DH59 114 aa13.72□□□□□ -0.21
PCDHGC3-208ENST00000622836 CCDC162PA2VCL2 907 aa13.72□□□□□ -0.21
PCDHGC3-208ENST00000622836 KLHL33A6NCF5 533 aa13.72□□□□□ -0.21
PCDHGC3-208ENST00000622836 MGAT4DA6NG13 374 aa13.72□□□□□ -0.21
PCDHGC3-208ENST00000622836 OR52A4PA6NMU1 304 aa13.72□□□□□ -0.21
PCDHGC3-208ENST00000622836 DUX1O43812 170 aa13.72□□□□□ -0.21
PCDHGC3-208ENST00000622836 BRINP1O60477 761 aa13.72□□□□□ -0.21
PCDHGC3-208ENST00000622836 GOT2P00505 430 aaKnown RBP13.72□□□□□ -0.21
PCDHGC3-208ENST00000622836 PRSS56P0CW18 603 aa13.72□□□□□ -0.21
PCDHGC3-208ENST00000622836 MGAT1P26572 445 aa13.72□□□□□ -0.21
PCDHGC3-208ENST00000622836 RBMS1P29558 406 aaKnown RBP13.72□□□□□ -0.21
PCDHGC3-208ENST00000622836 PDX1P52945 283 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms