RNA–Protein interactions for RNA: ENST00000621870.4

GGA3-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best)

Gene GGA3, Length 4,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-223ENST00000621870 GRIP2Q9C0E4 1043 aa9.15□□□□□ -0.94
GGA3-223ENST00000621870 MCOLN1Q9GZU1 580 aa9.15□□□□□ -0.94
GGA3-223ENST00000621870 HCSTQ9UBK5 93 aa9.15□□□□□ -0.94
GGA3-223ENST00000621870 COL2A1P02458 1487 aaPredicted RBP9.15□□□□□ -0.94
GGA3-223ENST00000621870 AHCTF1Q8WYP5 2266 aa9.15□□□□□ -0.94
GGA3-223ENST00000621870 ARID1BQ8NFD5 2236 aaPredicted RBP9.15□□□□□ -0.95
GGA3-223ENST00000621870 RBM47A0AV96 593 aaKnown RBP9.15□□□□□ -0.95
GGA3-223ENST00000621870 CHURC1-FNTBB4DL54 471 aa9.15□□□□□ -0.95
GGA3-223ENST00000621870 PI15O43692 258 aa9.15□□□□□ -0.95
GGA3-223ENST00000621870 OR4F21O95013 312 aa9.15□□□□□ -0.95
GGA3-223ENST00000621870 PSMC3P17980 439 aa9.15□□□□□ -0.95
GGA3-223ENST00000621870 IDH2P48735 452 aaKnown RBP9.15□□□□□ -0.95
GGA3-223ENST00000621870 SIRPB2Q5JXA9 342 aa9.15□□□□□ -0.95
GGA3-223ENST00000621870 DPY19L3Q6ZPD9 716 aa9.15□□□□□ -0.95
GGA3-223ENST00000621870 TMEM26Q6ZUK4 368 aa9.15□□□□□ -0.95
GGA3-223ENST00000621870 LUZP2Q86TE4 346 aa9.15□□□□□ -0.95
GGA3-223ENST00000621870 TRIM74Q86UV6 250 aa9.15□□□□□ -0.95
GGA3-223ENST00000621870 ZDHHC13Q8IUH4 622 aa9.15□□□□□ -0.95
GGA3-223ENST00000621870 MPP5Q8N3R9 675 aa9.15□□□□□ -0.95
GGA3-223ENST00000621870 DPP10Q8N608 796 aa9.15□□□□□ -0.95
GGA3-223ENST00000621870 RCN3Q96D15 328 aa9.15□□□□□ -0.95
GGA3-223ENST00000621870 PPM1MQ96MI6 270 aa9.15□□□□□ -0.95
GGA3-223ENST00000621870 OLFM3Q96PB7 478 aa9.15□□□□□ -0.95
GGA3-223ENST00000621870 GATA5Q9BWX5 397 aaPredicted RBP9.15□□□□□ -0.95
GGA3-223ENST00000621870 UGT2B28Q9BY64 529 aa9.15□□□□□ -0.95
GGA3-223ENST00000621870 HAPLN2Q9GZV7 340 aa9.15□□□□□ -0.95
GGA3-223ENST00000621870 REEP1Q9H902 201 aa9.15□□□□□ -0.95
GGA3-223ENST00000621870 LRTM1Q9HBL6 345 aa9.15□□□□□ -0.95
GGA3-223ENST00000621870 KCTD3Q9Y597 815 aa9.15□□□□□ -0.95
GGA3-223ENST00000621870 BACE2Q9Y5Z0 518 aa9.15□□□□□ -0.95
GGA3-223ENST00000621870 TCRBV7S3A2A0A539 114 aa9.14□□□□□ -0.95
GGA3-223ENST00000621870 FAM72CH0Y354 149 aa9.14□□□□□ -0.95
GGA3-223ENST00000621870 BIRC5O15392 142 aa9.14□□□□□ -0.95
GGA3-223ENST00000621870 FKBP6O75344 327 aa9.14□□□□□ -0.95
GGA3-223ENST00000621870 KAT7O95251 611 aa9.14□□□□□ -0.95
GGA3-223ENST00000621870 CLDN9O95484 217 aa9.14□□□□□ -0.95
GGA3-223ENST00000621870 CAPN1P07384 714 aa9.14□□□□□ -0.95
GGA3-223ENST00000621870 ZCCHC18P0CG32 403 aa9.14□□□□□ -0.95
GGA3-223ENST00000621870 UQCRBP14927 111 aa9.14□□□□□ -0.95
GGA3-223ENST00000621870 ITGAXP20702 1163 aa9.14□□□□□ -0.95
GGA3-223ENST00000621870 NT5EP21589 574 aa9.14□□□□□ -0.95
GGA3-223ENST00000621870 PAICSP22234 425 aaKnown RBP9.14□□□□□ -0.95
GGA3-223ENST00000621870 NAA20P61599 178 aa9.14□□□□□ -0.95
GGA3-223ENST00000621870 SLC25A11Q02978 314 aaKnown RBP9.14□□□□□ -0.95
GGA3-223ENST00000621870 SERINC3Q13530 473 aa9.14□□□□□ -0.95
GGA3-223ENST00000621870 NDUFA9Q16795 377 aa9.14□□□□□ -0.95
GGA3-223ENST00000621870 C1orf220Q5T0J3 134 aa9.14□□□□□ -0.95
GGA3-223ENST00000621870 FAM72AQ5TYM5 149 aa9.14□□□□□ -0.95
GGA3-223ENST00000621870 FAM72DQ6L9T8 149 aa9.14□□□□□ -0.95
GGA3-223ENST00000621870 ADCK1Q86TW2 530 aa9.14□□□□□ -0.95
GGA3-223ENST00000621870 FAM72BQ86X60 149 aa9.14□□□□□ -0.95
GGA3-223ENST00000621870 ADGRG2Q8IZP9 1017 aa9.14□□□□□ -0.95
GGA3-223ENST00000621870 TCAIMQ8N3R3 496 aa9.14□□□□□ -0.95
GGA3-223ENST00000621870 PNPT1Q8TCS8 783 aaKnown RBP9.14□□□□□ -0.95
GGA3-223ENST00000621870 SETD7Q8WTS6 366 aaKnown RBP9.14□□□□□ -0.95
GGA3-223ENST00000621870 SCAMP4Q969E2 229 aa9.14□□□□□ -0.95
GGA3-223ENST00000621870 PEBP4Q96S96 227 aa9.14□□□□□ -0.95
GGA3-223ENST00000621870 ADAM7Q9H2U9 754 aa9.14□□□□□ -0.95
GGA3-223ENST00000621870 TMLHEQ9NVH6 421 aa9.14□□□□□ -0.95
GGA3-223ENST00000621870 FBXW2Q9UKT8 454 aa9.14□□□□□ -0.95
GGA3-223ENST00000621870 KLHL20Q9Y2M5 609 aa9.14□□□□□ -0.95
GGA3-223ENST00000621870 CEP250Q9BV73 2442 aa9.14□□□□□ -0.95
GGA3-223ENST00000621870 RGSL1A5PLK6 1076 aa9.14□□□□□ -0.95
GGA3-223ENST00000621870 CLDN4O14493 209 aa9.14□□□□□ -0.95
GGA3-223ENST00000621870 RGS5O15539 181 aa9.14□□□□□ -0.95
GGA3-223ENST00000621870 STC2O76061 302 aa9.14□□□□□ -0.95
GGA3-223ENST00000621870 OAZ2O95190 189 aa9.14□□□□□ -0.95
GGA3-223ENST00000621870 CCNDBP1O95273 360 aa9.14□□□□□ -0.95
GGA3-223ENST00000621870 KLF8O95600 359 aaPredicted RBP9.14□□□□□ -0.95
GGA3-223ENST00000621870 ANXA4P09525 319 aaPredicted RBP9.14□□□□□ -0.95
GGA3-223ENST00000621870 EFNA1P20827 205 aaPredicted RBP9.14□□□□□ -0.95
GGA3-223ENST00000621870 BUD31P41223 144 aaPredicted RBP9.14□□□□□ -0.95
GGA3-223ENST00000621870 KIR3DL1P43629 444 aa9.14□□□□□ -0.95
GGA3-223ENST00000621870 PSME3P61289 254 aa9.14□□□□□ -0.95
GGA3-223ENST00000621870 CLCQ05315 142 aa9.14□□□□□ -0.95
GGA3-223ENST00000621870 RAB33AQ14088 237 aa9.14□□□□□ -0.95
GGA3-223ENST00000621870 UBAP2LQ14157 1087 aaKnown RBP9.14□□□□□ -0.95
GGA3-223ENST00000621870 PTPRCAPQ14761 206 aa9.14□□□□□ -0.95
GGA3-223ENST00000621870 USP39Q53GS9 565 aaKnown RBP9.14□□□□□ -0.95
GGA3-223ENST00000621870 CPTPQ5TA50 214 aa9.14□□□□□ -0.95
GGA3-223ENST00000621870 IL23RQ5VWK5 629 aa9.14□□□□□ -0.95
GGA3-223ENST00000621870 LRRC66Q68CR7 880 aa9.14□□□□□ -0.95
GGA3-223ENST00000621870 ARHGAP36Q6ZRI8 547 aa9.14□□□□□ -0.95
GGA3-223ENST00000621870 TRIM69Q86WT6 500 aa9.14□□□□□ -0.95
GGA3-223ENST00000621870 DDX1Q92499 740 aaKnown RBP9.14□□□□□ -0.95
GGA3-223ENST00000621870 SPOCK2Q92563 424 aa9.14□□□□□ -0.95
GGA3-223ENST00000621870 SLC9A6Q92581 669 aa9.14□□□□□ -0.95
GGA3-223ENST00000621870 BORCS6Q96GS4 357 aa9.14□□□□□ -0.95
GGA3-223ENST00000621870 RBM18Q96H35 190 aaKnown RBP9.14□□□□□ -0.95
GGA3-223ENST00000621870 ZNF358Q9NW07 568 aa9.14□□□□□ -0.95
GGA3-223ENST00000621870 DLGAP2Q9P1A6 1054 aa9.14□□□□□ -0.95
GGA3-223ENST00000621870 EGFL7Q9UHF1 273 aa9.14□□□□□ -0.95
GGA3-223ENST00000621870 LYVE1Q9Y5Y7 322 aa9.14□□□□□ -0.95
GGA3-223ENST00000621870 COL16A1Q07092 1604 aaPredicted RBP9.14□□□□□ -0.95
GGA3-223ENST00000621870 ALS2Q96Q42 1657 aa9.14□□□□□ -0.95
GGA3-223ENST00000621870 CCDC189A1A4V9 331 aa9.14□□□□□ -0.95
GGA3-223ENST00000621870 PLIN3O60664 434 aa9.14□□□□□ -0.95
GGA3-223ENST00000621870 OGNP20774 298 aaKnown RBP9.14□□□□□ -0.95
GGA3-223ENST00000621870 CRHR1P34998 444 aa9.14□□□□□ -0.95
GGA3-223ENST00000621870 MSX2P35548 267 aaPredicted RBP9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms