RNA–Protein interactions for RNA: ENST00000621676.4

VPS11-208, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS11, Length 3,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-208ENST00000621676 GPR1P46091 355 aa10.41□□□□□ -0.74
VPS11-208ENST00000621676 TIAL1Q01085 375 aaKnown RBP eCLIP10.41□□□□□ -0.74
VPS11-208ENST00000621676 POU4F1Q01851 419 aa10.41□□□□□ -0.74
VPS11-208ENST00000621676 CNTN1Q12860 1018 aa10.41□□□□□ -0.74
VPS11-208ENST00000621676 TUBB8Q3ZCM7 444 aa10.41□□□□□ -0.74
VPS11-208ENST00000621676 MMEL1Q495T6 779 aa10.41□□□□□ -0.74
VPS11-208ENST00000621676 LIPMQ5VYY2 423 aa10.41□□□□□ -0.74
VPS11-208ENST00000621676 DUS1LQ6P1R4 473 aaKnown RBP10.41□□□□□ -0.74
VPS11-208ENST00000621676 TMEM220Q6QAJ8 160 aa10.41□□□□□ -0.74
VPS11-208ENST00000621676 HDDC3Q8N4P3 179 aa10.41□□□□□ -0.74
VPS11-208ENST00000621676 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.41□□□□□ -0.74
VPS11-208ENST00000621676 GPR78Q96P69 363 aa10.41□□□□□ -0.74
VPS11-208ENST00000621676 HGH1Q9BTY7 390 aa10.41□□□□□ -0.74
VPS11-208ENST00000621676 WWOXQ9NZC7 414 aa10.41□□□□□ -0.74
VPS11-208ENST00000621676 PLEKHM1Q9Y4G2 1056 aa10.41□□□□□ -0.74
VPS11-208ENST00000621676 CKAP5Q14008 2032 aa10.4□□□□□ -0.74
VPS11-208ENST00000621676 A0A0G2JN53 185 aa10.4□□□□□ -0.74
VPS11-208ENST00000621676 TRAFD1O14545 582 aaPredicted RBP10.4□□□□□ -0.74
VPS11-208ENST00000621676 TSPAN6O43657 245 aa10.4□□□□□ -0.74
VPS11-208ENST00000621676 TIMP2P16035 220 aa10.4□□□□□ -0.74
VPS11-208ENST00000621676 NUDT2P50583 147 aa10.4□□□□□ -0.74
VPS11-208ENST00000621676 CREMQ03060 361 aa10.4□□□□□ -0.74
VPS11-208ENST00000621676 ADNP2Q6IQ32 1131 aa10.4□□□□□ -0.74
VPS11-208ENST00000621676 SNX32Q86XE0 403 aa10.4□□□□□ -0.74
VPS11-208ENST00000621676 PPP2R3CQ969Q6 453 aa10.4□□□□□ -0.74
VPS11-208ENST00000621676 LGR4Q9BXB1 951 aa10.4□□□□□ -0.74
VPS11-208ENST00000621676 RASSF4Q9H2L5 321 aa10.4□□□□□ -0.74
VPS11-208ENST00000621676 ARNT2Q9HBZ2 717 aa10.4□□□□□ -0.74
VPS11-208ENST00000621676 PCYT1BQ9Y5K3 369 aaPredicted RBP10.4□□□□□ -0.74
VPS11-208ENST00000621676 SMIM24O75264 130 aa10.4□□□□□ -0.74
VPS11-208ENST00000621676 C1SP09871 688 aa10.4□□□□□ -0.74
VPS11-208ENST00000621676 ZNF7P17097 686 aaPredicted RBP10.4□□□□□ -0.74
VPS11-208ENST00000621676 PSMC3P17980 439 aa10.4□□□□□ -0.74
VPS11-208ENST00000621676 MAOBP27338 520 aa10.4□□□□□ -0.74
VPS11-208ENST00000621676 HTR7P34969 479 aa10.4□□□□□ -0.74
VPS11-208ENST00000621676 HK3P52790 923 aa10.4□□□□□ -0.74
VPS11-208ENST00000621676 XIAPP98170 497 aa10.4□□□□□ -0.74
VPS11-208ENST00000621676 DUSP6Q16828 381 aa10.4□□□□□ -0.74
VPS11-208ENST00000621676 ANO7Q6IWH7 933 aa10.4□□□□□ -0.74
VPS11-208ENST00000621676 PAOXQ6QHF9 649 aa10.4□□□□□ -0.74
VPS11-208ENST00000621676 TMEM151AQ8N4L1 468 aa10.4□□□□□ -0.74
VPS11-208ENST00000621676 RBM15BQ8NDT2 890 aaKnown RBP10.4□□□□□ -0.74
VPS11-208ENST00000621676 C2orf42Q9NWW7 574 aa10.4□□□□□ -0.74
VPS11-208ENST00000621676 PPM1HQ9ULR3 514 aa10.4□□□□□ -0.74
VPS11-208ENST00000621676 CA14Q9ULX7 337 aa10.4□□□□□ -0.74
VPS11-208ENST00000621676 PLXNA4Q9HCM2 1894 aa10.4□□□□□ -0.74
VPS11-208ENST00000621676 FADS2P1A8MWK0 482 aa10.4□□□□□ -0.75
VPS11-208ENST00000621676 LAMP2P13473 410 aa10.4□□□□□ -0.75
VPS11-208ENST00000621676 CD1DP15813 335 aa10.4□□□□□ -0.75
VPS11-208ENST00000621676 MSH3P20585 1137 aa10.4□□□□□ -0.75
VPS11-208ENST00000621676 CRABP2P29373 138 aa10.4□□□□□ -0.75
VPS11-208ENST00000621676 CCR7P32248 378 aa10.4□□□□□ -0.75
VPS11-208ENST00000621676 SPAM1P38567 509 aa10.4□□□□□ -0.75
VPS11-208ENST00000621676 HTR6P50406 440 aa10.4□□□□□ -0.75
VPS11-208ENST00000621676 RPL14P50914 215 aaKnown RBP10.4□□□□□ -0.75
VPS11-208ENST00000621676 CLCN5P51795 746 aa10.4□□□□□ -0.75
VPS11-208ENST00000621676 DIO3P55073 304 aa10.4□□□□□ -0.75
VPS11-208ENST00000621676 CCDC15Q0P6D6 951 aa10.4□□□□□ -0.75
VPS11-208ENST00000621676 AGKQ53H12 422 aa10.4□□□□□ -0.75
VPS11-208ENST00000621676 Q6ZS52 159 aa10.4□□□□□ -0.75
VPS11-208ENST00000621676 PLD3Q8IV08 490 aa10.4□□□□□ -0.75
VPS11-208ENST00000621676 LSMEM2Q8N112 164 aa10.4□□□□□ -0.75
VPS11-208ENST00000621676 SP7Q8TDD2 431 aaPredicted RBP10.4□□□□□ -0.75
VPS11-208ENST00000621676 VPS33AQ96AX1 596 aa10.4□□□□□ -0.75
VPS11-208ENST00000621676 ARRDC3Q96B67 414 aa10.4□□□□□ -0.75
VPS11-208ENST00000621676 SCRN2Q96FV2 425 aa10.4□□□□□ -0.75
VPS11-208ENST00000621676 WDR70Q9NW82 654 aa10.4□□□□□ -0.75
VPS11-208ENST00000621676 THG1LQ9NWX6 298 aaKnown RBP10.4□□□□□ -0.75
VPS11-208ENST00000621676 LMCD1Q9NZU5 365 aa10.4□□□□□ -0.75
VPS11-208ENST00000621676 KLQ9UEF7 1012 aa10.4□□□□□ -0.75
VPS11-208ENST00000621676 KLHL20Q9Y2M5 609 aa10.4□□□□□ -0.75
VPS11-208ENST00000621676 MAP3K13O43283 966 aa10.39□□□□□ -0.75
VPS11-208ENST00000621676 CNTFP26441 200 aa10.39□□□□□ -0.75
VPS11-208ENST00000621676 BDKRB1P46663 353 aa10.39□□□□□ -0.75
VPS11-208ENST00000621676 TTPAP49638 278 aa10.39□□□□□ -0.75
VPS11-208ENST00000621676 AP1S1P61966 158 aa10.39□□□□□ -0.75
VPS11-208ENST00000621676 GRB7Q14451 532 aa10.39□□□□□ -0.75
VPS11-208ENST00000621676 CRY1Q16526 586 aa10.39□□□□□ -0.75
VPS11-208ENST00000621676 ZNF284Q2VY69 593 aa10.39□□□□□ -0.75
VPS11-208ENST00000621676 ANKRD54Q6NXT1 300 aa10.39□□□□□ -0.75
VPS11-208ENST00000621676 TPRG1Q6ZUI0 275 aa10.39□□□□□ -0.75
VPS11-208ENST00000621676 C11orf96Q7Z7L8 435 aa10.39□□□□□ -0.75
VPS11-208ENST00000621676 ZNF761Q86XN6 746 aaPredicted RBP10.39□□□□□ -0.75
VPS11-208ENST00000621676 TDHQ8IZJ6 230 aa10.39□□□□□ -0.75
VPS11-208ENST00000621676 AHI1Q8N157 1196 aa10.39□□□□□ -0.75
VPS11-208ENST00000621676 TERB1Q8NA31 727 aa10.39□□□□□ -0.75
VPS11-208ENST00000621676 CD200R1Q8TD46 325 aa10.39□□□□□ -0.75
VPS11-208ENST00000621676 ZNF599Q96NL3 588 aa10.39□□□□□ -0.75
VPS11-208ENST00000621676 MACROD1Q9BQ69 325 aa10.39□□□□□ -0.75
VPS11-208ENST00000621676 SFXN1Q9H9B4 322 aa10.39□□□□□ -0.75
VPS11-208ENST00000621676 ZBTB26Q9HCK0 441 aa10.39□□□□□ -0.75
VPS11-208ENST00000621676 CLEC1BQ9P126 229 aa10.39□□□□□ -0.75
VPS11-208ENST00000621676 COLQQ9Y215 455 aaPredicted RBP10.39□□□□□ -0.75
VPS11-208ENST00000621676 KCNK6Q9Y257 313 aa10.39□□□□□ -0.75
VPS11-208ENST00000621676 PIP5K1BO14986 540 aa10.39□□□□□ -0.75
VPS11-208ENST00000621676 PYGLP06737 847 aa10.39□□□□□ -0.75
VPS11-208ENST00000621676 RALGDSQ12967 914 aa10.39□□□□□ -0.75
VPS11-208ENST00000621676 CAPRIN1Q14444 709 aaKnown RBP10.39□□□□□ -0.75
VPS11-208ENST00000621676 CCDC153Q494R4 210 aa10.39□□□□□ -0.75
VPS11-208ENST00000621676 PREPLQ4J6C6 727 aaPredicted RBP10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms