RNA–Protein interactions for RNA: ENST00000620996.4

VTA1-205, Transcript of vesicle trafficking 1, humanhuman

TSL 3 BASIC

Gene VTA1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-205ENST00000620996 SCIMPQ6UWF3 145 aa9.82□□□□□ -0.84
VTA1-205ENST00000620996 NPAS3Q8IXF0 933 aa9.82□□□□□ -0.84
VTA1-205ENST00000620996 HIPK4Q8NE63 616 aa9.82□□□□□ -0.84
VTA1-205ENST00000620996 OSCP1Q8WVF1 389 aa9.82□□□□□ -0.84
VTA1-205ENST00000620996 STMN2Q93045 179 aa9.82□□□□□ -0.84
VTA1-205ENST00000620996 SCAMP4Q969E2 229 aa9.82□□□□□ -0.84
VTA1-205ENST00000620996 ISG20Q96AZ6 181 aaKnown RBP9.82□□□□□ -0.84
VTA1-205ENST00000620996 LENG8Q96PV6 779 aaPredicted RBP9.82□□□□□ -0.84
VTA1-205ENST00000620996 COPS8Q99627 209 aa9.82□□□□□ -0.84
VTA1-205ENST00000620996 CEP44Q9C0F1 390 aa9.82□□□□□ -0.84
VTA1-205ENST00000620996 DENND2DQ9H6A0 471 aaPredicted RBP9.82□□□□□ -0.84
VTA1-205ENST00000620996 SLC28A3Q9HAS3 691 aa9.82□□□□□ -0.84
VTA1-205ENST00000620996 PACSIN3Q9UKS6 424 aa9.82□□□□□ -0.84
VTA1-205ENST00000620996 SORCS3Q9UPU3 1222 aa9.82□□□□□ -0.84
VTA1-205ENST00000620996 PCDHB1Q9Y5F3 818 aa9.82□□□□□ -0.84
VTA1-205ENST00000620996 HEPACAM2A8MVW5 462 aa9.82□□□□□ -0.84
VTA1-205ENST00000620996 WISP3O95389 354 aaPredicted RBP9.82□□□□□ -0.84
VTA1-205ENST00000620996 CD1EP15812 388 aa9.82□□□□□ -0.84
VTA1-205ENST00000620996 RGS4P49798 205 aa9.82□□□□□ -0.84
VTA1-205ENST00000620996 ERVK-21P61565 698 aa9.82□□□□□ -0.84
VTA1-205ENST00000620996 PTSQ03393 145 aa9.82□□□□□ -0.84
VTA1-205ENST00000620996 BOP1Q14137 746 aaKnown RBP9.82□□□□□ -0.84
VTA1-205ENST00000620996 GRM2Q14416 872 aa9.82□□□□□ -0.84
VTA1-205ENST00000620996 DMC1Q14565 340 aa9.82□□□□□ -0.84
VTA1-205ENST00000620996 DNAL1Q4LDG9 190 aa9.82□□□□□ -0.84
VTA1-205ENST00000620996 C6orf163Q5TEZ5 329 aa9.82□□□□□ -0.84
VTA1-205ENST00000620996 ANKS6Q68DC2 871 aa9.82□□□□□ -0.84
VTA1-205ENST00000620996 RTL10Q7L3V2 364 aa9.82□□□□□ -0.84
VTA1-205ENST00000620996 NXPE1Q8N323 547 aa9.82□□□□□ -0.84
VTA1-205ENST00000620996 FUBP1Q96AE4 644 aaKnown RBP9.82□□□□□ -0.84
VTA1-205ENST00000620996 OTUB2Q96DC9 234 aa9.82□□□□□ -0.84
VTA1-205ENST00000620996 DCUN1D1Q96GG9 259 aa9.82□□□□□ -0.84
VTA1-205ENST00000620996 WRAP53Q9BUR4 548 aaKnown RBP9.82□□□□□ -0.84
VTA1-205ENST00000620996 SFXN1Q9H9B4 322 aa9.82□□□□□ -0.84
VTA1-205ENST00000620996 GIMAP2Q9UG22 337 aa9.82□□□□□ -0.84
VTA1-205ENST00000620996 IL36AQ9UHA7 158 aa9.82□□□□□ -0.84
VTA1-205ENST00000620996 SDHDO14521 159 aa9.81□□□□□ -0.84
VTA1-205ENST00000620996 GAPDHSO14556 408 aaPredicted RBP9.81□□□□□ -0.84
VTA1-205ENST00000620996 SH3BP2P78314 561 aa9.81□□□□□ -0.84
VTA1-205ENST00000620996 MESP2Q0VG99 397 aa9.81□□□□□ -0.84
VTA1-205ENST00000620996 KIF19Q2TAC6 998 aa9.81□□□□□ -0.84
VTA1-205ENST00000620996 C18orf21Q32NC0 220 aaPredicted RBP9.81□□□□□ -0.84
VTA1-205ENST00000620996 PDE12Q6L8Q7 609 aaKnown RBP9.81□□□□□ -0.84
VTA1-205ENST00000620996 SCUBE1Q8IWY4 988 aa9.81□□□□□ -0.84
VTA1-205ENST00000620996 YAF2Q8IY57 180 aa9.81□□□□□ -0.84
VTA1-205ENST00000620996 CEP70Q8NHQ1 597 aa9.81□□□□□ -0.84
VTA1-205ENST00000620996 NXPE3Q969Y0 559 aa9.81□□□□□ -0.84
VTA1-205ENST00000620996 FAR2Q96K12 515 aa9.81□□□□□ -0.84
VTA1-205ENST00000620996 ZNF641Q96N77 438 aaPredicted RBP9.81□□□□□ -0.84
VTA1-205ENST00000620996 HGH1Q9BTY7 390 aa9.81□□□□□ -0.84
VTA1-205ENST00000620996 PREBQ9HCU5 417 aa9.81□□□□□ -0.84
VTA1-205ENST00000620996 PCDH12Q9NPG4 1184 aa9.81□□□□□ -0.84
VTA1-205ENST00000620996 PKD2L2Q9NZM6 624 aa9.81□□□□□ -0.84
VTA1-205ENST00000620996 DEC1Q9P2X7 70 aa9.81□□□□□ -0.84
VTA1-205ENST00000620996 MSRAQ9UJ68 235 aa9.81□□□□□ -0.84
VTA1-205ENST00000620996 ITM2BQ9Y287 266 aa9.81□□□□□ -0.84
VTA1-205ENST00000620996 TIMM22Q9Y584 194 aa9.81□□□□□ -0.84
VTA1-205ENST00000620996 DENND4CQ5VZ89 1909 aa9.81□□□□□ -0.84
VTA1-205ENST00000620996 TBC1D3BA6NDS4 549 aa9.81□□□□□ -0.84
VTA1-205ENST00000620996 NFATC1O95644 943 aa9.81□□□□□ -0.84
VTA1-205ENST00000620996 C1SP09871 688 aa9.81□□□□□ -0.84
VTA1-205ENST00000620996 CYP2A6P11509 494 aaPredicted RBP9.81□□□□□ -0.84
VTA1-205ENST00000620996 MTHFD2P13995 350 aa9.81□□□□□ -0.84
VTA1-205ENST00000620996 ETV3P41162 512 aa9.81□□□□□ -0.84
VTA1-205ENST00000620996 CLCN7P51798 805 aa9.81□□□□□ -0.84
VTA1-205ENST00000620996 CLCQ05315 142 aa9.81□□□□□ -0.84
VTA1-205ENST00000620996 HSPA14Q0VDF9 509 aa9.81□□□□□ -0.84
VTA1-205ENST00000620996 ACOX1Q15067 660 aa9.81□□□□□ -0.84
VTA1-205ENST00000620996 TAF11Q15544 211 aa9.81□□□□□ -0.84
VTA1-205ENST00000620996 ZNF648Q5T619 568 aaPredicted RBP9.81□□□□□ -0.84
VTA1-205ENST00000620996 C1orf146Q5VVC0 180 aa9.81□□□□□ -0.84
VTA1-205ENST00000620996 DEFB107AQ8IZN7 70 aa9.81□□□□□ -0.84
VTA1-205ENST00000620996 ZBTB2Q8N680 514 aa9.81□□□□□ -0.84
VTA1-205ENST00000620996 VN1R2Q8NFZ6 395 aa9.81□□□□□ -0.84
VTA1-205ENST00000620996 RHEBL1Q8TAI7 183 aa9.81□□□□□ -0.84
VTA1-205ENST00000620996 P2RY12Q9H244 342 aa9.81□□□□□ -0.84
VTA1-205ENST00000620996 ANGPTL3Q9Y5C1 460 aa9.81□□□□□ -0.84
VTA1-205ENST00000620996 PABPN1LA6NDY0 278 aaKnown RBP9.81□□□□□ -0.84
VTA1-205ENST00000620996 PLK4O00444 970 aa9.81□□□□□ -0.84
VTA1-205ENST00000620996 AZIN1O14977 448 aa9.81□□□□□ -0.84
VTA1-205ENST00000620996 UBDO15205 165 aa9.81□□□□□ -0.84
VTA1-205ENST00000620996 KATNA1O75449 491 aa9.81□□□□□ -0.84
VTA1-205ENST00000620996 LINC00032P0C843 101 aa9.81□□□□□ -0.84
VTA1-205ENST00000620996 ENO3P13929 434 aaPredicted RBP9.81□□□□□ -0.84
VTA1-205ENST00000620996 NAT1P18440 290 aa9.81□□□□□ -0.84
VTA1-205ENST00000620996 HK2P52789 917 aa9.81□□□□□ -0.84
VTA1-205ENST00000620996 FOXA1P55317 472 aa9.81□□□□□ -0.84
VTA1-205ENST00000620996 CREB5Q02930 508 aa9.81□□□□□ -0.84
VTA1-205ENST00000620996 ACSBG2Q5FVE4 666 aa9.81□□□□□ -0.84
VTA1-205ENST00000620996 RNF220Q5VTB9 566 aa9.81□□□□□ -0.84
VTA1-205ENST00000620996 Q6ZVL8 140 aa9.81□□□□□ -0.84
VTA1-205ENST00000620996 SFTPA1Q8IWL2 248 aa9.81□□□□□ -0.84
VTA1-205ENST00000620996 DTX3LQ8TDB6 740 aa9.81□□□□□ -0.84
VTA1-205ENST00000620996 SMARCD2Q92925 531 aa9.81□□□□□ -0.84
VTA1-205ENST00000620996 L3HYPDHQ96EM0 354 aa9.81□□□□□ -0.84
VTA1-205ENST00000620996 C19orf60Q96EN9 201 aa9.81□□□□□ -0.84
VTA1-205ENST00000620996 SAMD11Q96NU1 681 aa9.81□□□□□ -0.84
VTA1-205ENST00000620996 CDK15Q96Q40 435 aa9.81□□□□□ -0.84
VTA1-205ENST00000620996 CPEB1Q9BZB8 566 aaKnown RBP9.81□□□□□ -0.84
VTA1-205ENST00000620996 DHRS7Q9Y394 339 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms