RNA–Protein interactions for RNA: ENST00000620709.4

CD40-207, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,522 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-207ENST00000620709 ALDH4A1P30038 563 aa15.96■□□□□ 0.15
CD40-207ENST00000620709 SLC5A2P31639 672 aa15.96■□□□□ 0.15
CD40-207ENST00000620709 OR1D5P58170 312 aa15.96■□□□□ 0.15
CD40-207ENST00000620709 PDIA2Q13087 525 aaKnown RBP15.96■□□□□ 0.15
CD40-207ENST00000620709 TRIM74Q86UV6 250 aa15.96■□□□□ 0.15
CD40-207ENST00000620709 NRROSQ86YC3 692 aa15.96■□□□□ 0.15
CD40-207ENST00000620709 LPCAT1Q8NF37 534 aa15.96■□□□□ 0.15
CD40-207ENST00000620709 GPBAR1Q8TDU6 330 aa15.96■□□□□ 0.15
CD40-207ENST00000620709 SPOCK2Q92563 424 aa15.96■□□□□ 0.15
CD40-207ENST00000620709 SCAMP4Q969E2 229 aa15.96■□□□□ 0.15
CD40-207ENST00000620709 SERPINB12Q96P63 405 aa15.96■□□□□ 0.15
CD40-207ENST00000620709 PPP1R2P1Q96PQ5 205 aa15.96■□□□□ 0.15
CD40-207ENST00000620709 MCCC1Q96RQ3 725 aaPredicted RBP15.96■□□□□ 0.15
CD40-207ENST00000620709 EPB41L4BQ9H329 900 aa15.96■□□□□ 0.15
CD40-207ENST00000620709 FAM53CQ9NYF3 392 aa15.96■□□□□ 0.15
CD40-207ENST00000620709 NINJ2Q9NZG7 142 aa15.96■□□□□ 0.15
CD40-207ENST00000620709 APPL1Q9UKG1 709 aa15.96■□□□□ 0.15
CD40-207ENST00000620709 PLEKHM1Q9Y4G2 1056 aa15.96■□□□□ 0.15
CD40-207ENST00000620709 LOXL2Q9Y4K0 774 aa15.96■□□□□ 0.15
CD40-207ENST00000620709 GCN1Q92616 2671 aaKnown RBP15.96■□□□□ 0.15
CD40-207ENST00000620709 ATMQ13315 3056 aa15.96■□□□□ 0.14
CD40-207ENST00000620709 ERI2A8K979 691 aaKnown RBP15.95■□□□□ 0.14
CD40-207ENST00000620709 INPP4BO15327 924 aa15.95■□□□□ 0.14
CD40-207ENST00000620709 ASMTLO95671 621 aa15.95■□□□□ 0.14
CD40-207ENST00000620709 TTC4O95801 387 aa15.95■□□□□ 0.14
CD40-207ENST00000620709 FGF1P05230 155 aa15.95■□□□□ 0.14
CD40-207ENST00000620709 NFKB1P19838 968 aa15.95■□□□□ 0.14
CD40-207ENST00000620709 CD68P34810 354 aaPredicted RBP15.95■□□□□ 0.14
CD40-207ENST00000620709 MAPK10P53779 464 aa15.95■□□□□ 0.14
CD40-207ENST00000620709 EIF3BP55884 814 aaKnown RBP15.95■□□□□ 0.14
CD40-207ENST00000620709 CTBSQ01459 385 aa15.95■□□□□ 0.14
CD40-207ENST00000620709 VAC14Q08AM6 782 aa15.95■□□□□ 0.14
CD40-207ENST00000620709 CBLBQ13191 982 aa15.95■□□□□ 0.14
CD40-207ENST00000620709 EIF3IQ13347 325 aaKnown RBP15.95■□□□□ 0.14
CD40-207ENST00000620709 PRPSAP1Q14558 356 aa15.95■□□□□ 0.14
CD40-207ENST00000620709 HSP90B2PQ58FF3 399 aa15.95■□□□□ 0.14
CD40-207ENST00000620709 DNAJC21Q5F1R6 531 aaKnown RBP15.95■□□□□ 0.14
CD40-207ENST00000620709 FNBP1LQ5T0N5 605 aa15.95■□□□□ 0.14
CD40-207ENST00000620709 USP53Q70EK8 1073 aa15.95■□□□□ 0.14
CD40-207ENST00000620709 TECPR1Q7Z6L1 1165 aa15.95■□□□□ 0.14
CD40-207ENST00000620709 ZBED8Q8IZ13 594 aa15.95■□□□□ 0.14
CD40-207ENST00000620709 CBARPQ8N350 705 aaPredicted RBP15.95■□□□□ 0.14
CD40-207ENST00000620709 RDH14Q9HBH5 336 aa15.95■□□□□ 0.14
CD40-207ENST00000620709 XAB2Q9HCS7 855 aaKnown RBP15.95■□□□□ 0.14
CD40-207ENST00000620709 MED4Q9NPJ6 270 aa15.95■□□□□ 0.14
CD40-207ENST00000620709 A0A0J9YYE9 177 aa15.94■□□□□ 0.14
CD40-207ENST00000620709 F5H423 210 aaPredicted RBP15.94■□□□□ 0.14
CD40-207ENST00000620709 AGPSO00116 658 aa15.94■□□□□ 0.14
CD40-207ENST00000620709 NUDT21O43809 227 aaKnown RBP15.94■□□□□ 0.14
CD40-207ENST00000620709 ACSL3O95573 720 aa15.94■□□□□ 0.14
CD40-207ENST00000620709 TRBC1P01850 177 aa15.94■□□□□ 0.14
CD40-207ENST00000620709 HLA-DQB2P05538 268 aa15.94■□□□□ 0.14
CD40-207ENST00000620709 PNLIPP16233 465 aa15.94■□□□□ 0.14
CD40-207ENST00000620709 ITIH1P19827 911 aa15.94■□□□□ 0.14
CD40-207ENST00000620709 CA4P22748 312 aa15.94■□□□□ 0.14
CD40-207ENST00000620709 PTSQ03393 145 aa15.94■□□□□ 0.14
CD40-207ENST00000620709 CLN3Q13286 438 aa15.94■□□□□ 0.14
CD40-207ENST00000620709 SLC29A2Q14542 456 aa15.94■□□□□ 0.14
CD40-207ENST00000620709 BBS9Q3SYG4 887 aa15.94■□□□□ 0.14
CD40-207ENST00000620709 CCDC81Q6ZN84 652 aa15.94■□□□□ 0.14
CD40-207ENST00000620709 CLEC14AQ86T13 490 aa15.94■□□□□ 0.14
CD40-207ENST00000620709 GOLGA6L1Q8N7Z2 621 aa15.94■□□□□ 0.14
CD40-207ENST00000620709 CNTD1Q8N815 330 aa15.94■□□□□ 0.14
CD40-207ENST00000620709 PATE1Q8WXA2 126 aa15.94■□□□□ 0.14
CD40-207ENST00000620709 C9orf72Q96LT7 481 aa15.94■□□□□ 0.14
CD40-207ENST00000620709 AGAP2Q99490 1192 aa15.94■□□□□ 0.14
CD40-207ENST00000620709 RIOK2Q9BVS4 552 aaKnown RBP15.94■□□□□ 0.14
CD40-207ENST00000620709 ZMYND15Q9H091 742 aa15.94■□□□□ 0.14
CD40-207ENST00000620709 PPIL1Q9Y3C6 166 aa15.94■□□□□ 0.14
CD40-207ENST00000620709 TRBV23OR9-2A0A075B6M9 112 aa15.94■□□□□ 0.14
CD40-207ENST00000620709 TK2O00142 265 aa15.94■□□□□ 0.14
CD40-207ENST00000620709 PSMD3O43242 534 aa15.94■□□□□ 0.14
CD40-207ENST00000620709 FZD6O60353 706 aa15.94■□□□□ 0.14
CD40-207ENST00000620709 CLDN7O95471 211 aa15.94■□□□□ 0.14
CD40-207ENST00000620709 AP2A1O95782 977 aa15.94■□□□□ 0.14
CD40-207ENST00000620709 ABHD2P08910 425 aa15.94■□□□□ 0.14
CD40-207ENST00000620709 MLNP12872 115 aa15.94■□□□□ 0.14
CD40-207ENST00000620709 CES1P23141 567 aa15.94■□□□□ 0.14
CD40-207ENST00000620709 CCKBRP32239 447 aa15.94■□□□□ 0.14
CD40-207ENST00000620709 ACTR1BP42025 376 aa15.94■□□□□ 0.14
CD40-207ENST00000620709 MLLT3P42568 568 aaPredicted RBP15.94■□□□□ 0.14
CD40-207ENST00000620709 ACTR1AP61163 376 aa15.94■□□□□ 0.14
CD40-207ENST00000620709 RHDQ02161 417 aa15.94■□□□□ 0.14
CD40-207ENST00000620709 IFFO1Q0D2I5 559 aa15.94■□□□□ 0.14
CD40-207ENST00000620709 NIPAL4Q0D2K0 466 aa15.94■□□□□ 0.14
CD40-207ENST00000620709 IHHQ14623 411 aa15.94■□□□□ 0.14
CD40-207ENST00000620709 KYNUQ16719 465 aa15.94■□□□□ 0.14
CD40-207ENST00000620709 MSS51Q4VC12 460 aa15.94■□□□□ 0.14
CD40-207ENST00000620709 TMPRSS9Q7Z410 1059 aa15.94■□□□□ 0.14
CD40-207ENST00000620709 KRT222Q8N1A0 295 aa15.94■□□□□ 0.14
CD40-207ENST00000620709 LRRC39Q96DD0 335 aa15.94■□□□□ 0.14
CD40-207ENST00000620709 PKNOX2Q96KN3 472 aa15.94■□□□□ 0.14
CD40-207ENST00000620709 FCRL5Q96RD9 977 aa15.94■□□□□ 0.14
CD40-207ENST00000620709 SH3GL2Q99962 352 aa15.94■□□□□ 0.14
CD40-207ENST00000620709 TDRD1Q9BXT4 1180 aaKnown RBP15.94■□□□□ 0.14
CD40-207ENST00000620709 CDH19Q9H159 772 aa15.94■□□□□ 0.14
CD40-207ENST00000620709 SEMA6CQ9H3T2 930 aa15.94■□□□□ 0.14
CD40-207ENST00000620709 GLOD4Q9HC38 313 aa15.94■□□□□ 0.14
CD40-207ENST00000620709 TRNAU1APQ9NX07 287 aaKnown RBP15.94■□□□□ 0.14
CD40-207ENST00000620709 OGFRQ9NZT2 677 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms