RNA–Protein interactions for RNA: ENST00000620394.1

SRRT-218, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-218ENST00000620394 CCDC170Q8IYT3 715 aa21.69■■□□□ 1.06
SRRT-218ENST00000620394 RCOR2Q8IZ40 523 aa21.69■■□□□ 1.06
SRRT-218ENST00000620394 ZNF567Q8N184 647 aa21.69■■□□□ 1.06
SRRT-218ENST00000620394 MIB2Q96AX9 1013 aa21.69■■□□□ 1.06
SRRT-218ENST00000620394 ABHD17AQ96GS6 310 aa21.69■■□□□ 1.06
SRRT-218ENST00000620394 OXNAD1Q96HP4 312 aaPredicted RBP21.69■■□□□ 1.06
SRRT-218ENST00000620394 MRGPRX2Q96LB1 330 aa21.69■■□□□ 1.06
SRRT-218ENST00000620394 ZPBPQ9BS86 351 aa21.69■■□□□ 1.06
SRRT-218ENST00000620394 OSGEPL1Q9H4B0 414 aa21.69■■□□□ 1.06
SRRT-218ENST00000620394 SCHIP1Q9P0W5 487 aaPredicted RBP21.69■■□□□ 1.06
SRRT-218ENST00000620394 SLC23A2Q9UGH3 650 aa21.69■■□□□ 1.06
SRRT-218ENST00000620394 PLAAQ9Y263 795 aa21.69■■□□□ 1.06
SRRT-218ENST00000620394 HACD1B0YJ81 288 aa21.68■■□□□ 1.06
SRRT-218ENST00000620394 ZRANB2O95218 330 aaKnown RBP eCLIP21.68■■□□□ 1.06
SRRT-218ENST00000620394 OAS2P29728 719 aaKnown RBP21.68■■□□□ 1.06
SRRT-218ENST00000620394 MC2RQ01718 297 aa21.68■■□□□ 1.06
SRRT-218ENST00000620394 ABHD18Q0P651 414 aa21.68■■□□□ 1.06
SRRT-218ENST00000620394 KLRB1Q12918 225 aa21.68■■□□□ 1.06
SRRT-218ENST00000620394 LLGL1Q15334 1064 aa21.68■■□□□ 1.06
SRRT-218ENST00000620394 INSCQ1MX18 579 aa21.68■■□□□ 1.06
SRRT-218ENST00000620394 ATP13A5Q4VNC0 1218 aa21.68■■□□□ 1.06
SRRT-218ENST00000620394 SIRPB2Q5JXA9 342 aa21.68■■□□□ 1.06
SRRT-218ENST00000620394 ZDHHC20Q5W0Z9 365 aa21.68■■□□□ 1.06
SRRT-218ENST00000620394 WASH2PQ6VEQ5 465 aa21.68■■□□□ 1.06
SRRT-218ENST00000620394 BBS12Q6ZW61 710 aa21.68■■□□□ 1.06
SRRT-218ENST00000620394 C11orf96Q7Z7L8 435 aa21.68■■□□□ 1.06
SRRT-218ENST00000620394 STARD8Q92502 1023 aa21.68■■□□□ 1.06
SRRT-218ENST00000620394 RBM41Q96IZ5 413 aaKnown RBP21.68■■□□□ 1.06
SRRT-218ENST00000620394 TBC1D10AQ9BXI6 508 aa21.68■■□□□ 1.06
SRRT-218ENST00000620394 SPRY4Q9C004 299 aa21.68■■□□□ 1.06
SRRT-218ENST00000620394 TRIT1Q9H3H1 467 aaKnown RBP21.68■■□□□ 1.06
SRRT-218ENST00000620394 WASH6PQ9NQA3 447 aa21.68■■□□□ 1.06
SRRT-218ENST00000620394 HACD3Q9P035 362 aa21.68■■□□□ 1.06
SRRT-218ENST00000620394 KLHL8Q9P2G9 620 aaPredicted RBP21.68■■□□□ 1.06
SRRT-218ENST00000620394 LOC101059948A0A1B0GTJ6 334 aa21.67■■□□□ 1.06
SRRT-218ENST00000620394 BLACEA4D250 179 aa21.67■■□□□ 1.06
SRRT-218ENST00000620394 MTX2O75431 263 aa21.67■■□□□ 1.06
SRRT-218ENST00000620394 C9P02748 559 aa21.67■■□□□ 1.06
SRRT-218ENST00000620394 HLA-DPA1P20036 260 aa21.67■■□□□ 1.06
SRRT-218ENST00000620394 CD97P48960 835 aa21.67■■□□□ 1.06
SRRT-218ENST00000620394 MPP3Q13368 585 aa21.67■■□□□ 1.06
SRRT-218ENST00000620394 NOMO1Q15155 1222 aa21.67■■□□□ 1.06
SRRT-218ENST00000620394 PLA2G4EQ3MJ16 856 aa21.67■■□□□ 1.06
SRRT-218ENST00000620394 C4orf17Q53FE4 359 aa21.67■■□□□ 1.06
SRRT-218ENST00000620394 AGAP9Q5VTM2 703 aa21.67■■□□□ 1.06
SRRT-218ENST00000620394 ABRAXAS1Q6UWZ7 409 aa21.67■■□□□ 1.06
SRRT-218ENST00000620394 TMEM26Q6ZUK4 368 aa21.67■■□□□ 1.06
SRRT-218ENST00000620394 ZC3H18Q86VM9 953 aaKnown RBP21.67■■□□□ 1.06
SRRT-218ENST00000620394 NCSTNQ92542 709 aa21.67■■□□□ 1.06
SRRT-218ENST00000620394 KRT35Q92764 455 aa21.67■■□□□ 1.06
SRRT-218ENST00000620394 TRIM5Q9C035 493 aa21.67■■□□□ 1.06
SRRT-218ENST00000620394 BPIFA1Q9NP55 256 aa21.67■■□□□ 1.06
SRRT-218ENST00000620394 FBXO8Q9NRD0 319 aa21.67■■□□□ 1.06
SRRT-218ENST00000620394 OGFRQ9NZT2 677 aa21.67■■□□□ 1.06
SRRT-218ENST00000620394 IL17CQ9P0M4 197 aa21.67■■□□□ 1.06
SRRT-218ENST00000620394 ZNF624Q9P2J8 865 aaPredicted RBP21.67■■□□□ 1.06
SRRT-218ENST00000620394 TMEM184BQ9Y519 407 aaPredicted RBP21.67■■□□□ 1.06
SRRT-218ENST00000620394 PCDHA13Q9Y5I0 950 aa21.67■■□□□ 1.06
SRRT-218ENST00000620394 APOC4-APOC2K7ER74 178 aa21.66■■□□□ 1.06
SRRT-218ENST00000620394 CDK14O94921 469 aa21.66■■□□□ 1.06
SRRT-218ENST00000620394 APOC2P02655 101 aa21.66■■□□□ 1.06
SRRT-218ENST00000620394 BRAFP15056 766 aa21.66■■□□□ 1.06
SRRT-218ENST00000620394 FECHP22830 423 aa21.66■■□□□ 1.06
SRRT-218ENST00000620394 SLC19A1P41440 591 aa21.66■■□□□ 1.06
SRRT-218ENST00000620394 CHRNA4P43681 627 aa21.66■■□□□ 1.06
SRRT-218ENST00000620394 PPM1FP49593 454 aaPredicted RBP21.66■■□□□ 1.06
SRRT-218ENST00000620394 XRCC4Q13426 336 aa21.66■■□□□ 1.06
SRRT-218ENST00000620394 SLC1A5Q15758 541 aa21.66■■□□□ 1.06
SRRT-218ENST00000620394 DEFB109BQ30KR1 87 aa21.66■■□□□ 1.06
SRRT-218ENST00000620394 SNAP47Q5SQN1 464 aa21.66■■□□□ 1.06
SRRT-218ENST00000620394 PLXDC1Q8IUK5 500 aa21.66■■□□□ 1.06
SRRT-218ENST00000620394 HAUS1Q96CS2 278 aa21.66■■□□□ 1.06
SRRT-218ENST00000620394 LRRC4CQ9HCJ2 640 aa21.66■■□□□ 1.06
SRRT-218ENST00000620394 IL26Q9NPH9 171 aa21.66■■□□□ 1.06
SRRT-218ENST00000620394 POT1Q9NUX5 634 aa21.66■■□□□ 1.06
SRRT-218ENST00000620394 SIDT1Q9NXL6 827 aaKnown RBP21.66■■□□□ 1.06
SRRT-218ENST00000620394 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP21.66■■□□□ 1.06
SRRT-218ENST00000620394 TRHDEQ9UKU6 1024 aa21.66■■□□□ 1.06
SRRT-218ENST00000620394 TFR2Q9UP52 801 aa21.66■■□□□ 1.06
SRRT-218ENST00000620394 SBDSQ9Y3A5 250 aaKnown RBP eCLIP21.66■■□□□ 1.06
SRRT-218ENST00000620394 SPTAN1Q13813 2472 aaKnown RBP21.66■■□□□ 1.06
SRRT-218ENST00000620394 NBPF19A0A087WUL8 3843 aa21.66■■□□□ 1.06
SRRT-218ENST00000620394 GAPDHSO14556 408 aaPredicted RBP21.65■■□□□ 1.06
SRRT-218ENST00000620394 TCN2P20062 427 aa21.65■■□□□ 1.06
SRRT-218ENST00000620394 SPAM1P38567 509 aa21.65■■□□□ 1.06
SRRT-218ENST00000620394 MAPK9P45984 424 aa21.65■■□□□ 1.06
SRRT-218ENST00000620394 CCDC50Q8IVM0 306 aa21.65■■□□□ 1.06
SRRT-218ENST00000620394 UNC5BQ8IZJ1 945 aa21.65■■□□□ 1.06
SRRT-218ENST00000620394 LUC7LQ9NQ29 371 aaKnown RBP21.65■■□□□ 1.06
SRRT-218ENST00000620394 SMOXQ9NWM0 555 aa21.65■■□□□ 1.06
SRRT-218ENST00000620394 DNAJC16Q9Y2G8 782 aa21.65■■□□□ 1.06
SRRT-218ENST00000620394 KCTD3Q9Y597 815 aa21.65■■□□□ 1.06
SRRT-218ENST00000620394 SPENQ96T58 3664 aaKnown RBP21.65■■□□□ 1.06
SRRT-218ENST00000620394 TEX15Q9BXT5 2789 aa21.65■■□□□ 1.06
SRRT-218ENST00000620394 SPTBN1Q01082 2364 aaKnown RBP21.64■■□□□ 1.05
SRRT-218ENST00000620394 A8MU76 341 aa21.64■■□□□ 1.05
SRRT-218ENST00000620394 STK17BO94768 372 aa21.64■■□□□ 1.05
SRRT-218ENST00000620394 VIPP01282 170 aa21.64■■□□□ 1.05
SRRT-218ENST00000620394 CTNNA1P35221 906 aaKnown RBP21.64■■□□□ 1.05
SRRT-218ENST00000620394 PTPN7P35236 360 aa21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms