RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 METTL5Q9NRN9 209 aaKnown RBP4.48□□□□□ -1.69
SNCA-213ENST00000618500 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.48□□□□□ -1.69
SNCA-213ENST00000618500 PKD2L2Q9NZM6 624 aa4.48□□□□□ -1.69
SNCA-213ENST00000618500 NOCTQ9UK39 431 aaKnown RBP4.48□□□□□ -1.69
SNCA-213ENST00000618500 RPH3AQ9Y2J0 694 aaPredicted RBP4.48□□□□□ -1.69
SNCA-213ENST00000618500 AP1M2Q9Y6Q5 423 aa4.48□□□□□ -1.69
SNCA-213ENST00000618500 UNC13CQ8NB66 2214 aa4.48□□□□□ -1.69
SNCA-213ENST00000618500 A0A1B0GVL5 298 aa4.47□□□□□ -1.69
SNCA-213ENST00000618500 SIGLEC16A6NMB1 481 aa4.47□□□□□ -1.69
SNCA-213ENST00000618500 CREB3O43889 395 aa4.47□□□□□ -1.69
SNCA-213ENST00000618500 PALMO75781 387 aa4.47□□□□□ -1.69
SNCA-213ENST00000618500 ZNF202O95125 648 aa4.47□□□□□ -1.69
SNCA-213ENST00000618500 CRYABP02511 175 aaKnown RBP4.47□□□□□ -1.69
SNCA-213ENST00000618500 ALBP02768 609 aa4.47□□□□□ -1.69
SNCA-213ENST00000618500 CALB1P05937 261 aa4.47□□□□□ -1.69
SNCA-213ENST00000618500 ZNF7P17097 686 aaPredicted RBP4.47□□□□□ -1.69
SNCA-213ENST00000618500 DESP17661 470 aa4.47□□□□□ -1.69
SNCA-213ENST00000618500 VCLP18206 1134 aa4.47□□□□□ -1.69
SNCA-213ENST00000618500 SLC19A1P41440 591 aa4.47□□□□□ -1.69
SNCA-213ENST00000618500 RBPJQ06330 500 aa4.47□□□□□ -1.69
SNCA-213ENST00000618500 TRAF2Q12933 501 aa4.47□□□□□ -1.69
SNCA-213ENST00000618500 PAK1Q13153 545 aa4.47□□□□□ -1.69
SNCA-213ENST00000618500 VWA2Q5GFL6 755 aa4.47□□□□□ -1.69
SNCA-213ENST00000618500 ARMC12Q5T9G4 340 aa4.47□□□□□ -1.69
SNCA-213ENST00000618500 ZDHHC20Q5W0Z9 365 aa4.47□□□□□ -1.69
SNCA-213ENST00000618500 PPP1R32Q7Z5V6 425 aa4.47□□□□□ -1.69
SNCA-213ENST00000618500 LRRTM4Q86VH4 590 aa4.47□□□□□ -1.69
SNCA-213ENST00000618500 EID3Q8N140 333 aa4.47□□□□□ -1.69
SNCA-213ENST00000618500 FAM172AQ8WUF8 416 aa4.47□□□□□ -1.69
SNCA-213ENST00000618500 NR4A3Q92570 626 aa4.47□□□□□ -1.69
SNCA-213ENST00000618500 MR1Q95460 341 aa4.47□□□□□ -1.69
SNCA-213ENST00000618500 CCDC120Q96HB5 630 aa4.47□□□□□ -1.69
SNCA-213ENST00000618500 SLC39A8Q9C0K1 460 aa4.47□□□□□ -1.69
SNCA-213ENST00000618500 SCAND2PQ9GZW5 306 aaPredicted RBP4.47□□□□□ -1.69
SNCA-213ENST00000618500 CHST8Q9H2A9 424 aa4.47□□□□□ -1.69
SNCA-213ENST00000618500 ATP13A2Q9NQ11 1180 aa4.47□□□□□ -1.69
SNCA-213ENST00000618500 C1GALT1Q9NS00 363 aa4.47□□□□□ -1.69
SNCA-213ENST00000618500 SAMSN1Q9NSI8 373 aaKnown RBP4.47□□□□□ -1.69
SNCA-213ENST00000618500 NXT1Q9UKK6 140 aaKnown RBP4.47□□□□□ -1.69
SNCA-213ENST00000618500 POMT2Q9UKY4 750 aa4.47□□□□□ -1.69
SNCA-213ENST00000618500 HCFC1P51610 2035 aa4.47□□□□□ -1.69
SNCA-213ENST00000618500 TEP1Q99973 2627 aaKnown RBP4.47□□□□□ -1.69
SNCA-213ENST00000618500 RELNP78509 3460 aa4.47□□□□□ -1.69
SNCA-213ENST00000618500 BOD1L1Q8NFC6 3051 aa4.47□□□□□ -1.69
SNCA-213ENST00000618500 IGHV5-51A0A0C4DH38 117 aa4.47□□□□□ -1.69
SNCA-213ENST00000618500 J3KR12 359 aa4.47□□□□□ -1.69
SNCA-213ENST00000618500 AGPSO00116 658 aa4.47□□□□□ -1.69
SNCA-213ENST00000618500 PEX12O00623 359 aa4.47□□□□□ -1.69
SNCA-213ENST00000618500 GSTM1P09488 218 aa4.47□□□□□ -1.69
SNCA-213ENST00000618500 EBLN1P0CF75 366 aa4.47□□□□□ -1.69
SNCA-213ENST00000618500 UNGP13051 313 aaPredicted RBP4.47□□□□□ -1.69
SNCA-213ENST00000618500 ZNF8P17098 575 aaPredicted RBP4.47□□□□□ -1.69
SNCA-213ENST00000618500 AGXTP21549 392 aa4.47□□□□□ -1.69
SNCA-213ENST00000618500 EPHB2P29323 1055 aa4.47□□□□□ -1.69
SNCA-213ENST00000618500 SPINT3P49223 89 aa4.47□□□□□ -1.69
SNCA-213ENST00000618500 CTSCP53634 463 aa4.47□□□□□ -1.69
SNCA-213ENST00000618500 CDH6P55285 790 aa4.47□□□□□ -1.69
SNCA-213ENST00000618500 RPS18P62269 152 aaKnown RBP4.47□□□□□ -1.69
SNCA-213ENST00000618500 GSTM4Q03013 218 aa4.47□□□□□ -1.69
SNCA-213ENST00000618500 ANO6Q4KMQ2 910 aa4.47□□□□□ -1.69
SNCA-213ENST00000618500 SNAP47Q5SQN1 464 aa4.47□□□□□ -1.69
SNCA-213ENST00000618500 SPOCD1Q6ZMY3 1216 aa4.47□□□□□ -1.69
SNCA-213ENST00000618500 CAMKMTQ7Z624 323 aa4.47□□□□□ -1.69
SNCA-213ENST00000618500 ADGRG6Q86SQ4 1221 aa4.47□□□□□ -1.69
SNCA-213ENST00000618500 BIVMQ86UB2 503 aa4.47□□□□□ -1.69
SNCA-213ENST00000618500 TMEM126BQ8IUX1 230 aa4.47□□□□□ -1.69
SNCA-213ENST00000618500 FAM71BQ8TC56 605 aa4.47□□□□□ -1.69
SNCA-213ENST00000618500 BRSK1Q8TDC3 778 aa4.47□□□□□ -1.69
SNCA-213ENST00000618500 FNIP1Q8TF40 1166 aa4.47□□□□□ -1.69
SNCA-213ENST00000618500 CNPY3Q9BT09 278 aa4.47□□□□□ -1.69
SNCA-213ENST00000618500 GOLPH3LQ9H4A5 285 aa4.47□□□□□ -1.69
SNCA-213ENST00000618500 EPS8L2Q9H6S3 715 aa4.47□□□□□ -1.69
SNCA-213ENST00000618500 SP110Q9HB58 689 aa4.47□□□□□ -1.69
SNCA-213ENST00000618500 FAM207AQ9NSI2 230 aaPredicted RBP4.47□□□□□ -1.69
SNCA-213ENST00000618500 SMOXQ9NWM0 555 aa4.47□□□□□ -1.69
SNCA-213ENST00000618500 KCNN3Q9UGI6 736 aa4.47□□□□□ -1.69
SNCA-213ENST00000618500 MOSPD1Q9UJG1 213 aa4.47□□□□□ -1.69
SNCA-213ENST00000618500 EDARQ9UNE0 448 aa4.47□□□□□ -1.69
SNCA-213ENST00000618500 HEBP2Q9Y5Z4 205 aa4.47□□□□□ -1.69
SNCA-213ENST00000618500 NF1P21359 2839 aa4.47□□□□□ -1.69
SNCA-213ENST00000618500 TMEM200CA6NKL6 621 aa4.46□□□□□ -1.69
SNCA-213ENST00000618500 GOLGA8SH3BPF8 625 aa4.46□□□□□ -1.69
SNCA-213ENST00000618500 SMAPO00193 183 aa4.46□□□□□ -1.69
SNCA-213ENST00000618500 ZNF185O15231 689 aa4.46□□□□□ -1.69
SNCA-213ENST00000618500 MLYCDO95822 493 aa4.46□□□□□ -1.69
SNCA-213ENST00000618500 HPP00738 406 aa4.46□□□□□ -1.69
SNCA-213ENST00000618500 AMD1P17707 334 aa4.46□□□□□ -1.69
SNCA-213ENST00000618500 PBX1P40424 430 aa4.46□□□□□ -1.69
SNCA-213ENST00000618500 FOLR3P41439 243 aa4.46□□□□□ -1.69
SNCA-213ENST00000618500 TPI1P60174 286 aa4.46□□□□□ -1.69
SNCA-213ENST00000618500 KRT85P78386 507 aa4.46□□□□□ -1.69
SNCA-213ENST00000618500 ADORA2A-AS1P86434 159 aa4.46□□□□□ -1.69
SNCA-213ENST00000618500 CDR2Q01850 454 aa4.46□□□□□ -1.69
SNCA-213ENST00000618500 DNM1Q05193 864 aaKnown RBP4.46□□□□□ -1.69
SNCA-213ENST00000618500 GPR18Q14330 331 aa4.46□□□□□ -1.69
SNCA-213ENST00000618500 EXOC3L4Q17RC7 722 aa4.46□□□□□ -1.69
SNCA-213ENST00000618500 LRRC66Q68CR7 880 aa4.46□□□□□ -1.69
SNCA-213ENST00000618500 RHBDD2Q6NTF9 364 aa4.46□□□□□ -1.69
SNCA-213ENST00000618500 Q6ZVL8 140 aa4.46□□□□□ -1.69
SNCA-213ENST00000618500 OOSP2Q86WS3 158 aa4.46□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms