RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 MAN1A2O60476 641 aa9.34□□□□□ -0.91
CLTCL1-208ENST00000615606 LYPLA1O75608 230 aaPredicted RBP9.34□□□□□ -0.91
CLTCL1-208ENST00000615606 KLF8O95600 359 aaPredicted RBP9.34□□□□□ -0.91
CLTCL1-208ENST00000615606 SERPINA6P08185 405 aa9.34□□□□□ -0.91
CLTCL1-208ENST00000615606 COX4I1P13073 169 aa9.34□□□□□ -0.91
CLTCL1-208ENST00000615606 ACP5P13686 325 aa9.34□□□□□ -0.91
CLTCL1-208ENST00000615606 PSMA3P25788 255 aa9.34□□□□□ -0.91
CLTCL1-208ENST00000615606 EPHA3P29320 983 aa9.34□□□□□ -0.91
CLTCL1-208ENST00000615606 SCAPQ12770 1279 aa9.34□□□□□ -0.91
CLTCL1-208ENST00000615606 GTF2H2Q13888 395 aa9.34□□□□□ -0.91
CLTCL1-208ENST00000615606 OASLQ15646 514 aaKnown RBP9.34□□□□□ -0.91
CLTCL1-208ENST00000615606 XKR4Q5GH76 650 aa9.34□□□□□ -0.91
CLTCL1-208ENST00000615606 PPM1JQ5JR12 505 aa9.34□□□□□ -0.91
CLTCL1-208ENST00000615606 WASHC2DQ5SRD0 308 aa9.34□□□□□ -0.91
CLTCL1-208ENST00000615606 IRGCQ6NXR0 463 aa9.34□□□□□ -0.91
CLTCL1-208ENST00000615606 GTF2H2CQ6P1K8 395 aa9.34□□□□□ -0.91
CLTCL1-208ENST00000615606 FEM1AQ9BSK4 669 aa9.34□□□□□ -0.91
CLTCL1-208ENST00000615606 NOL11Q9H8H0 719 aaKnown RBP9.34□□□□□ -0.91
CLTCL1-208ENST00000615606 ATP6AP2A0A1C7CYW4 349 aa9.34□□□□□ -0.91
CLTCL1-208ENST00000615606 NPC1O15118 1278 aa9.34□□□□□ -0.91
CLTCL1-208ENST00000615606 UGT1A9O60656 530 aa9.34□□□□□ -0.91
CLTCL1-208ENST00000615606 MMP20O60882 483 aa9.34□□□□□ -0.91
CLTCL1-208ENST00000615606 SLC22A3O75751 556 aa9.34□□□□□ -0.91
CLTCL1-208ENST00000615606 ATP6AP2O75787 350 aa9.34□□□□□ -0.91
CLTCL1-208ENST00000615606 NR2F1P10589 423 aa9.34□□□□□ -0.91
CLTCL1-208ENST00000615606 HLA-EP13747 358 aa9.34□□□□□ -0.91
CLTCL1-208ENST00000615606 UGT1A6P19224 532 aa9.34□□□□□ -0.91
CLTCL1-208ENST00000615606 EN2P19622 333 aaPredicted RBP9.34□□□□□ -0.91
CLTCL1-208ENST00000615606 UGT1A1P22309 533 aa9.34□□□□□ -0.91
CLTCL1-208ENST00000615606 UGT1A4P22310 534 aa9.34□□□□□ -0.91
CLTCL1-208ENST00000615606 PIK3R1P27986 724 aa9.34□□□□□ -0.91
CLTCL1-208ENST00000615606 UGT1A3P35503 534 aa9.34□□□□□ -0.91
CLTCL1-208ENST00000615606 UGT1A5P35504 534 aa9.34□□□□□ -0.91
CLTCL1-208ENST00000615606 BUD31P41223 144 aaPredicted RBP9.34□□□□□ -0.91
CLTCL1-208ENST00000615606 ARRB1P49407 418 aaPredicted RBP9.34□□□□□ -0.91
CLTCL1-208ENST00000615606 RUNX3Q13761 415 aa9.34□□□□□ -0.91
CLTCL1-208ENST00000615606 KCNJ11Q14654 390 aa9.34□□□□□ -0.91
CLTCL1-208ENST00000615606 DHCR24Q15392 516 aa9.34□□□□□ -0.91
CLTCL1-208ENST00000615606 KCTD19Q17RG1 926 aaPredicted RBP9.34□□□□□ -0.91
CLTCL1-208ENST00000615606 ANO7Q6IWH7 933 aa9.34□□□□□ -0.91
CLTCL1-208ENST00000615606 ZNF544Q6NX49 715 aa9.34□□□□□ -0.91
CLTCL1-208ENST00000615606 CYB5D1Q6P9G0 228 aa9.34□□□□□ -0.91
CLTCL1-208ENST00000615606 THAP11Q96EK4 314 aa9.34□□□□□ -0.91
CLTCL1-208ENST00000615606 DTNBP1Q96EV8 351 aa9.34□□□□□ -0.91
CLTCL1-208ENST00000615606 RNF145Q96MT1 663 aa9.34□□□□□ -0.91
CLTCL1-208ENST00000615606 AGAP2Q99490 1192 aa9.34□□□□□ -0.91
CLTCL1-208ENST00000615606 CCM2Q9BSQ5 444 aa9.34□□□□□ -0.91
CLTCL1-208ENST00000615606 TFB2MQ9H5Q4 396 aaKnown RBP9.34□□□□□ -0.91
CLTCL1-208ENST00000615606 CXorf56Q9H5V9 222 aa9.34□□□□□ -0.91
CLTCL1-208ENST00000615606 UGT1A7Q9HAW7 530 aa9.34□□□□□ -0.91
CLTCL1-208ENST00000615606 UGT1A10Q9HAW8 530 aa9.34□□□□□ -0.91
CLTCL1-208ENST00000615606 UGT1A8Q9HAW9 530 aa9.34□□□□□ -0.91
CLTCL1-208ENST00000615606 ITM2CQ9NQX7 267 aa9.34□□□□□ -0.91
CLTCL1-208ENST00000615606 DNAJC28Q9NX36 388 aa9.34□□□□□ -0.91
CLTCL1-208ENST00000615606 CD207Q9UJ71 328 aa9.34□□□□□ -0.91
CLTCL1-208ENST00000615606 OGDHLQ9ULD0 1010 aa9.34□□□□□ -0.91
CLTCL1-208ENST00000615606 NEMP2A6NFY4 417 aa9.34□□□□□ -0.91
CLTCL1-208ENST00000615606 RFXANKO14593 260 aa9.34□□□□□ -0.91
CLTCL1-208ENST00000615606 EDF1O60869 148 aaKnown RBP9.34□□□□□ -0.91
CLTCL1-208ENST00000615606 CLDN7O95471 211 aa9.34□□□□□ -0.91
CLTCL1-208ENST00000615606 CBX6O95503 412 aa9.34□□□□□ -0.91
CLTCL1-208ENST00000615606 ITGB1P05556 798 aa9.34□□□□□ -0.91
CLTCL1-208ENST00000615606 SRPRAP08240 638 aaKnown RBP9.34□□□□□ -0.91
CLTCL1-208ENST00000615606 ACADSP16219 412 aa9.34□□□□□ -0.91
CLTCL1-208ENST00000615606 STXBP1P61764 594 aaKnown RBP9.34□□□□□ -0.91
CLTCL1-208ENST00000615606 STX4Q12846 297 aa9.34□□□□□ -0.91
CLTCL1-208ENST00000615606 CHIT1Q13231 466 aa9.34□□□□□ -0.91
CLTCL1-208ENST00000615606 TSNQ15631 228 aaKnown RBP9.34□□□□□ -0.91
CLTCL1-208ENST00000615606 FGD3Q5JSP0 725 aa9.34□□□□□ -0.91
CLTCL1-208ENST00000615606 TJAP1Q5JTD0 557 aa9.34□□□□□ -0.91
CLTCL1-208ENST00000615606 CPTPQ5TA50 214 aa9.34□□□□□ -0.91
CLTCL1-208ENST00000615606 TMEM154Q6P9G4 183 aa9.34□□□□□ -0.91
CLTCL1-208ENST00000615606 CHMP1BQ7LBR1 199 aa9.34□□□□□ -0.91
CLTCL1-208ENST00000615606 GDPD5Q8WTR4 605 aa9.34□□□□□ -0.91
CLTCL1-208ENST00000615606 VMP1Q96GC9 406 aa9.34□□□□□ -0.91
CLTCL1-208ENST00000615606 APOLD1Q96LR9 279 aa9.34□□□□□ -0.91
CLTCL1-208ENST00000615606 OR52E6Q96RD3 313 aa9.34□□□□□ -0.91
CLTCL1-208ENST00000615606 MIPEPQ99797 713 aa9.34□□□□□ -0.91
CLTCL1-208ENST00000615606 CEP44Q9C0F1 390 aa9.34□□□□□ -0.91
CLTCL1-208ENST00000615606 ROGDIQ9GZN7 287 aa9.34□□□□□ -0.91
CLTCL1-208ENST00000615606 PNPOQ9NVS9 261 aa9.34□□□□□ -0.91
CLTCL1-208ENST00000615606 MRTO4Q9UKD2 239 aaKnown RBP9.34□□□□□ -0.91
CLTCL1-208ENST00000615606 TTC24A2A3L6 582 aaPredicted RBP9.33□□□□□ -0.92
CLTCL1-208ENST00000615606 CLDN4O14493 209 aa9.33□□□□□ -0.92
CLTCL1-208ENST00000615606 PLIN3O60664 434 aa9.33□□□□□ -0.92
CLTCL1-208ENST00000615606 PDE9AO76083 593 aa9.33□□□□□ -0.92
CLTCL1-208ENST00000615606 KAT7O95251 611 aa9.33□□□□□ -0.92
CLTCL1-208ENST00000615606 GNAZP19086 355 aa9.33□□□□□ -0.92
CLTCL1-208ENST00000615606 PWP1Q13610 501 aa9.33□□□□□ -0.92
CLTCL1-208ENST00000615606 PRKD1Q15139 912 aaPredicted RBP9.33□□□□□ -0.92
CLTCL1-208ENST00000615606 ALG11Q2TAA5 492 aa9.33□□□□□ -0.92
CLTCL1-208ENST00000615606 TCHHL1Q5QJ38 904 aaPredicted RBP9.33□□□□□ -0.92
CLTCL1-208ENST00000615606 LRRC66Q68CR7 880 aa9.33□□□□□ -0.92
CLTCL1-208ENST00000615606 METTL21AQ8WXB1 218 aa9.33□□□□□ -0.92
CLTCL1-208ENST00000615606 DLG3Q92796 817 aa9.33□□□□□ -0.92
CLTCL1-208ENST00000615606 C19orf60Q96EN9 201 aa9.33□□□□□ -0.92
CLTCL1-208ENST00000615606 PIWIL1Q96J94 861 aaKnown RBP9.33□□□□□ -0.92
CLTCL1-208ENST00000615606 A0A0D9SEW6 157 aa9.33□□□□□ -0.92
CLTCL1-208ENST00000615606 OR6A2O95222 327 aa9.33□□□□□ -0.92
CLTCL1-208ENST00000615606 TRBC1P01850 177 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms